RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 HSP90AB1P08238 724 aaKnown RBP18.89■□□□□ 0.61
UBE4B-201ENST00000253251 NBPF1Q3BBV0 1214 aa18.89■□□□□ 0.61
UBE4B-201ENST00000253251 HSCBQ8IWL3 235 aa18.89■□□□□ 0.61
UBE4B-201ENST00000253251 KIAA0556O60303 1618 aa18.89■□□□□ 0.61
UBE4B-201ENST00000253251 NUP153P49790 1475 aaKnown RBP18.88■□□□□ 0.61
UBE4B-201ENST00000253251 ATF3P18847 181 aa18.88■□□□□ 0.61
UBE4B-201ENST00000253251 ZKSCAN2Q63HK3 967 aa18.88■□□□□ 0.61
UBE4B-201ENST00000253251 CABP2Q9NPB3 220 aa18.88■□□□□ 0.61
UBE4B-201ENST00000253251 ITSN2Q9NZM3 1697 aa18.88■□□□□ 0.61
UBE4B-201ENST00000253251 PLCH2O75038 1416 aa18.87■□□□□ 0.61
UBE4B-201ENST00000253251 ZNF692Q9BU19 519 aaPredicted RBP18.87■□□□□ 0.61
UBE4B-201ENST00000253251 NOP58Q9Y2X3 529 aaKnown RBP18.87■□□□□ 0.61
UBE4B-201ENST00000253251 KIF21AQ7Z4S6 1674 aa18.87■□□□□ 0.61
UBE4B-201ENST00000253251 RRP7AQ9Y3A4 280 aaKnown RBP18.87■□□□□ 0.61
UBE4B-201ENST00000253251 ATAD2Q6PL18 1390 aa18.86■□□□□ 0.61
UBE4B-201ENST00000253251 FGD1P98174 961 aa18.86■□□□□ 0.61
UBE4B-201ENST00000253251 RRP1P56182 461 aaKnown RBP18.85■□□□□ 0.61
UBE4B-201ENST00000253251 TEFQ10587 303 aa18.85■□□□□ 0.61
UBE4B-201ENST00000253251 GPATCH3Q96I76 525 aa18.85■□□□□ 0.61
UBE4B-201ENST00000253251 DHX29Q7Z478 1369 aaKnown RBP18.85■□□□□ 0.61
UBE4B-201ENST00000253251 AAMPQ13685 434 aa18.85■□□□□ 0.61
UBE4B-201ENST00000253251 PRAM1Q96QH2 718 aa18.85■□□□□ 0.61
UBE4B-201ENST00000253251 NUP160Q12769 1436 aa18.85■□□□□ 0.61
UBE4B-201ENST00000253251 GPRASP1Q5JY77 1395 aa18.84■□□□□ 0.61
UBE4B-201ENST00000253251 EIF4G3O43432 1585 aaKnown RBP18.84■□□□□ 0.61
UBE4B-201ENST00000253251 KIAA1211Q6ZU35 1233 aa18.84■□□□□ 0.61
UBE4B-201ENST00000253251 GNAI1P63096 354 aa18.83■□□□□ 0.6
UBE4B-201ENST00000253251 CENPQQ7L2Z9 268 aaPredicted RBP18.83■□□□□ 0.6
UBE4B-201ENST00000253251 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.6
UBE4B-201ENST00000253251 RIPK4P57078 832 aa18.82■□□□□ 0.6
UBE4B-201ENST00000253251 API5Q9BZZ5 524 aaKnown RBP18.82■□□□□ 0.6
UBE4B-201ENST00000253251 GGNBP2Q9H3C7 697 aa18.81■□□□□ 0.6
UBE4B-201ENST00000253251 ANKLE2Q86XL3 938 aa18.81■□□□□ 0.6
UBE4B-201ENST00000253251 CLUAP1Q96AJ1 413 aa18.81■□□□□ 0.6
UBE4B-201ENST00000253251 ZRSR1Q15695 479 aaKnown RBP18.81■□□□□ 0.6
UBE4B-201ENST00000253251 PPP2R1AP30153 589 aa18.8■□□□□ 0.6
UBE4B-201ENST00000253251 RPRD2Q5VT52 1461 aaKnown RBP18.8■□□□□ 0.6
UBE4B-201ENST00000253251 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
UBE4B-201ENST00000253251 EVA1CP58658 441 aa18.8■□□□□ 0.6
UBE4B-201ENST00000253251 SLC4A10Q6U841 1118 aa18.79■□□□□ 0.6
UBE4B-201ENST00000253251 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
UBE4B-201ENST00000253251 TEX14Q8IWB6 1497 aa18.79■□□□□ 0.6
UBE4B-201ENST00000253251 RTEL1-TNFRSF6BF6WH68 1400 aa18.78■□□□□ 0.6
UBE4B-201ENST00000253251 KIF16BQ96L93 1317 aa18.78■□□□□ 0.6
UBE4B-201ENST00000253251 DDX19BQ9UMR2 479 aa18.78■□□□□ 0.6
UBE4B-201ENST00000253251 WDR7Q9Y4E6 1490 aa18.78■□□□□ 0.6
UBE4B-201ENST00000253251 DUOX2Q9NRD8 1548 aa18.77■□□□□ 0.6
UBE4B-201ENST00000253251 MTHFSP49914 203 aa18.77■□□□□ 0.6
UBE4B-201ENST00000253251 ASXL2Q76L83 1435 aa18.77■□□□□ 0.6
UBE4B-201ENST00000253251 CFAP43Q8NDM7 1665 aa18.77■□□□□ 0.59
UBE4B-201ENST00000253251 CDK19Q9BWU1 502 aa18.77■□□□□ 0.59
UBE4B-201ENST00000253251 NLRP6P59044 892 aa18.76■□□□□ 0.59
UBE4B-201ENST00000253251 FAM135AQ9P2D6 1515 aa18.75■□□□□ 0.59
UBE4B-201ENST00000253251 TTC5Q8N0Z6 440 aa18.75■□□□□ 0.59
UBE4B-201ENST00000253251 ZNF330Q9Y3S2 320 aaPredicted RBP18.75■□□□□ 0.59
UBE4B-201ENST00000253251 APBB1O00213 710 aa18.75■□□□□ 0.59
UBE4B-201ENST00000253251 PROSER2Q86WR7 435 aaPredicted RBP18.75■□□□□ 0.59
UBE4B-201ENST00000253251 RBM19Q9Y4C8 960 aaKnown RBP18.75■□□□□ 0.59
UBE4B-201ENST00000253251 TAF7LQ5H9L4 462 aa18.73■□□□□ 0.59
UBE4B-201ENST00000253251 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
UBE4B-201ENST00000253251 PTMSP20962 102 aa18.73■□□□□ 0.59
UBE4B-201ENST00000253251 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
UBE4B-201ENST00000253251 SHANK2Q9UPX8 1470 aa18.72■□□□□ 0.59
UBE4B-201ENST00000253251 GAS2L2Q8NHY3 880 aa18.72■□□□□ 0.59
UBE4B-201ENST00000253251 SLC12A5Q9H2X9 1139 aa18.72■□□□□ 0.59
UBE4B-201ENST00000253251 ADAMTS8Q9UP79 889 aa18.72■□□□□ 0.59
UBE4B-201ENST00000253251 ZNF518AQ6AHZ1 1483 aa18.72■□□□□ 0.59
UBE4B-201ENST00000253251 NEXNQ0ZGT2 675 aa18.72■□□□□ 0.59
UBE4B-201ENST00000253251 DZIP1LQ8IYY4 767 aaKnown RBP18.72■□□□□ 0.59
UBE4B-201ENST00000253251 KDM5BQ9UGL1 1544 aa18.71■□□□□ 0.59
UBE4B-201ENST00000253251 DDX58O95786 925 aaKnown RBP18.71■□□□□ 0.59
UBE4B-201ENST00000253251 GORABQ5T7V8 394 aa18.71■□□□□ 0.59
UBE4B-201ENST00000253251 TRIM44Q96DX7 344 aaPredicted RBP18.71■□□□□ 0.59
UBE4B-201ENST00000253251 TMX4Q9H1E5 349 aaPredicted RBP18.7■□□□□ 0.58
UBE4B-201ENST00000253251 ABCC2Q92887 1545 aa18.69■□□□□ 0.58
UBE4B-201ENST00000253251 CABP1Q9NZU7 370 aa18.69■□□□□ 0.58
UBE4B-201ENST00000253251 ELL2O00472 640 aaPredicted RBP18.69■□□□□ 0.58
UBE4B-201ENST00000253251 ABTB2Q8N961 1025 aa18.68■□□□□ 0.58
UBE4B-201ENST00000253251 CRBNQ96SW2 442 aa18.68■□□□□ 0.58
UBE4B-201ENST00000253251 TCP11L2Q8N4U5 519 aa18.68■□□□□ 0.58
UBE4B-201ENST00000253251 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
UBE4B-201ENST00000253251 SMG6Q86US8 1419 aaKnown RBP18.67■□□□□ 0.58
UBE4B-201ENST00000253251 DISP1Q96F81 1524 aa18.67■□□□□ 0.58
UBE4B-201ENST00000253251 CCDC61Q9Y6R9 512 aa18.67■□□□□ 0.58
UBE4B-201ENST00000253251 ABCC10Q5T3U5 1492 aa18.67■□□□□ 0.58
UBE4B-201ENST00000253251 EXOC6Q8TAG9 804 aa18.67■□□□□ 0.58
UBE4B-201ENST00000253251 CT47B1P0C2W7 299 aaPredicted RBP18.66■□□□□ 0.58
UBE4B-201ENST00000253251 ESCO1Q5FWF5 840 aa18.66■□□□□ 0.58
UBE4B-201ENST00000253251 BCL2L13Q9BXK5 485 aa18.66■□□□□ 0.58
UBE4B-201ENST00000253251 A2MP01023 1474 aa18.66■□□□□ 0.58
UBE4B-201ENST00000253251 TSPYL4Q9UJ04 414 aa18.66■□□□□ 0.58
UBE4B-201ENST00000253251 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
UBE4B-201ENST00000253251 PNISRQ8TF01 805 aaKnown RBP18.65■□□□□ 0.58
UBE4B-201ENST00000253251 COG6Q9Y2V7 657 aa18.65■□□□□ 0.58
UBE4B-201ENST00000253251 HMOX1P09601 288 aa18.65■□□□□ 0.58
UBE4B-201ENST00000253251 NAP1L2Q9ULW6 460 aaPredicted RBP18.65■□□□□ 0.58
UBE4B-201ENST00000253251 SYCP2Q9BX26 1530 aa18.65■□□□□ 0.58
UBE4B-201ENST00000253251 TRIM6-TRIM34B2RNG4 842 aa18.64■□□□□ 0.57
UBE4B-201ENST00000253251 GOLGA6L4A6NEF3 574 aa18.64■□□□□ 0.57
UBE4B-201ENST00000253251 IDI1Q13907 227 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms