RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 SKOR2Q2VWA4 1001 aaPredicted RBP9.75□□□□□ -0.85
GGCX-201ENST00000233838 ANKRD20A12PQ8NF67 263 aa9.74□□□□□ -0.85
GGCX-201ENST00000233838 NAP1L1P55209 391 aaKnown RBP9.74□□□□□ -0.85
GGCX-201ENST00000233838 EFCAB2Q5VUJ9 269 aa9.74□□□□□ -0.85
GGCX-201ENST00000233838 LRRFIP1Q32MZ4 808 aaKnown RBP9.74□□□□□ -0.85
GGCX-201ENST00000233838 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
GGCX-201ENST00000233838 C9orf78Q9NZ63 289 aaPredicted RBP9.74□□□□□ -0.85
GGCX-201ENST00000233838 COG3Q96JB2 828 aa9.74□□□□□ -0.85
GGCX-201ENST00000233838 KANK4Q5T7N3 995 aaPredicted RBP9.74□□□□□ -0.85
GGCX-201ENST00000233838 CCDC43Q96MW1 224 aaKnown RBP9.74□□□□□ -0.85
GGCX-201ENST00000233838 CENPQQ7L2Z9 268 aaPredicted RBP9.74□□□□□ -0.85
GGCX-201ENST00000233838 HOMER1Q86YM7 354 aa9.74□□□□□ -0.85
GGCX-201ENST00000233838 SYTL4Q96C24 671 aaPredicted RBP9.74□□□□□ -0.85
GGCX-201ENST00000233838 IPO7O95373 1038 aaKnown RBP9.73□□□□□ -0.85
GGCX-201ENST00000233838 HOOK1Q9UJC3 728 aaKnown RBP9.73□□□□□ -0.85
GGCX-201ENST00000233838 RRP12Q5JTH9 1297 aaKnown RBP9.73□□□□□ -0.85
GGCX-201ENST00000233838 FAM161AQ3B820 660 aa9.73□□□□□ -0.85
GGCX-201ENST00000233838 IFIT2P09913 472 aaKnown RBP9.73□□□□□ -0.85
GGCX-201ENST00000233838 NEXNQ0ZGT2 675 aa9.73□□□□□ -0.85
GGCX-201ENST00000233838 RUFY2Q8WXA3 655 aa9.73□□□□□ -0.85
GGCX-201ENST00000233838 PHLDB1Q86UU1 1377 aa9.73□□□□□ -0.85
GGCX-201ENST00000233838 RAPGEF2Q9Y4G8 1499 aa9.73□□□□□ -0.85
GGCX-201ENST00000233838 ERICH2A1L162 156 aa9.73□□□□□ -0.85
GGCX-201ENST00000233838 KLHL34Q8N239 644 aa9.73□□□□□ -0.85
GGCX-201ENST00000233838 BICD2Q8TD16 824 aa9.73□□□□□ -0.85
GGCX-201ENST00000233838 BCL11BQ9C0K0 894 aaPredicted RBP9.73□□□□□ -0.85
GGCX-201ENST00000233838 CPLX1O14810 134 aa9.72□□□□□ -0.85
GGCX-201ENST00000233838 CRBNQ96SW2 442 aa9.72□□□□□ -0.85
GGCX-201ENST00000233838 CALRP27797 417 aaKnown RBP9.72□□□□□ -0.85
GGCX-201ENST00000233838 TEX35Q5T0J7 233 aa9.72□□□□□ -0.85
GGCX-201ENST00000233838 CPLX2Q6PUV4 134 aaKnown RBP9.72□□□□□ -0.85
GGCX-201ENST00000233838 NLRP13Q86W25 1043 aa9.72□□□□□ -0.85
GGCX-201ENST00000233838 PDE3BQ13370 1112 aa9.72□□□□□ -0.85
GGCX-201ENST00000233838 MYBBP1AQ9BQG0 1328 aaKnown RBP9.72□□□□□ -0.85
GGCX-201ENST00000233838 TEFQ10587 303 aa9.72□□□□□ -0.85
GGCX-201ENST00000233838 ZKSCAN2Q63HK3 967 aa9.72□□□□□ -0.85
GGCX-201ENST00000233838 PANK3Q9H999 370 aa9.72□□□□□ -0.85
GGCX-201ENST00000233838 ATAD2BQ9ULI0 1458 aa9.71□□□□□ -0.85
GGCX-201ENST00000233838 RSPH6AQ9H0K4 717 aa9.71□□□□□ -0.85
GGCX-201ENST00000233838 FYB1O15117 783 aa9.71□□□□□ -0.85
GGCX-201ENST00000233838 RUFY1Q96T51 708 aa9.71□□□□□ -0.85
GGCX-201ENST00000233838 CT47A1Q5JQC4 288 aaPredicted RBP9.71□□□□□ -0.86
GGCX-201ENST00000233838 AK7Q96M32 723 aa9.71□□□□□ -0.86
GGCX-201ENST00000233838 TRDNQ13061 729 aa9.7□□□□□ -0.86
GGCX-201ENST00000233838 ODF2Q5BJF6 829 aa9.7□□□□□ -0.86
GGCX-201ENST00000233838 ZKSCAN1P17029 563 aaPredicted RBP9.7□□□□□ -0.86
GGCX-201ENST00000233838 KDM4AO75164 1064 aa9.7□□□□□ -0.86
GGCX-201ENST00000233838 PDS5BQ9NTI5 1447 aa9.7□□□□□ -0.86
GGCX-201ENST00000233838 PDE4AP27815 886 aa9.69□□□□□ -0.86
GGCX-201ENST00000233838 SASS6Q6UVJ0 657 aa9.69□□□□□ -0.86
GGCX-201ENST00000233838 GSE1Q14687 1217 aa9.69□□□□□ -0.86
GGCX-201ENST00000233838 EPS15P42566 896 aa9.69□□□□□ -0.86
GGCX-201ENST00000233838 L3MBTL2Q969R5 705 aa9.69□□□□□ -0.86
GGCX-201ENST00000233838 COG6Q9Y2V7 657 aa9.69□□□□□ -0.86
GGCX-201ENST00000233838 CGNL1Q0VF96 1302 aa9.69□□□□□ -0.86
GGCX-201ENST00000233838 HSP90AB2PQ58FF8 381 aa9.69□□□□□ -0.86
GGCX-201ENST00000233838 EXOC6Q8TAG9 804 aa9.68□□□□□ -0.86
GGCX-201ENST00000233838 E9PSI1 815 aa9.68□□□□□ -0.86
GGCX-201ENST00000233838 VPS37CA5D8V6 355 aaPredicted RBP9.68□□□□□ -0.86
GGCX-201ENST00000233838 RBM33Q96EV2 1170 aaKnown RBP9.68□□□□□ -0.86
GGCX-201ENST00000233838 G3BP1Q13283 466 aaKnown RBP eCLIP9.68□□□□□ -0.861e-6■■■■□ 24.7
GGCX-201ENST00000233838 ZFYVE27Q5T4F4 411 aa9.68□□□□□ -0.86
GGCX-201ENST00000233838 VSIG10Q8N0Z9 540 aa9.68□□□□□ -0.86
GGCX-201ENST00000233838 REC8O95072 547 aa9.67□□□□□ -0.86
GGCX-201ENST00000233838 RRP1P56182 461 aaKnown RBP9.67□□□□□ -0.86
GGCX-201ENST00000233838 CCDC27Q2M243 656 aa9.67□□□□□ -0.86
GGCX-201ENST00000233838 RNF20Q5VTR2 975 aa9.67□□□□□ -0.86
GGCX-201ENST00000233838 MTMR7Q9Y216 660 aa9.67□□□□□ -0.86
GGCX-201ENST00000233838 EVC2Q86UK5 1308 aa9.67□□□□□ -0.86
GGCX-201ENST00000233838 SMC3Q9UQE7 1217 aa9.67□□□□□ -0.86
GGCX-201ENST00000233838 MINK1Q8N4C8 1332 aaPredicted RBP9.67□□□□□ -0.86
GGCX-201ENST00000233838 UACAQ9BZF9 1416 aa9.67□□□□□ -0.86
GGCX-201ENST00000233838 DDX58O95786 925 aaKnown RBP9.66□□□□□ -0.86
GGCX-201ENST00000233838 PDILTQ8N807 584 aa9.66□□□□□ -0.86
GGCX-201ENST00000233838 FAM13BQ9NYF5 915 aa9.66□□□□□ -0.86
GGCX-201ENST00000233838 SKIDA1Q1XH10 827 aa9.66□□□□□ -0.86
GGCX-201ENST00000233838 IFT57Q9NWB7 429 aa9.66□□□□□ -0.86
GGCX-201ENST00000233838 ROCK1Q13464 1354 aa9.66□□□□□ -0.86
GGCX-201ENST00000233838 CDR1P51861 262 aa9.66□□□□□ -0.86
GGCX-201ENST00000233838 CCDC18Q5T9S5 1454 aa9.66□□□□□ -0.86
GGCX-201ENST00000233838 CCDC144AA2RUR9 1427 aa9.66□□□□□ -0.86
GGCX-201ENST00000233838 CAGE1Q8TC20 777 aa9.65□□□□□ -0.86
GGCX-201ENST00000233838 SAFBQ15424 915 aaKnown RBP eCLIP9.65□□□□□ -0.86
GGCX-201ENST00000233838 PSME1Q06323 249 aa9.65□□□□□ -0.86
GGCX-201ENST00000233838 TTLL5Q6EMB2 1281 aa9.65□□□□□ -0.86
GGCX-201ENST00000233838 MNS1Q8NEH6 495 aa9.65□□□□□ -0.86
GGCX-201ENST00000233838 OLFM4Q6UX06 510 aa9.65□□□□□ -0.86
GGCX-201ENST00000233838 CADPSQ9ULU8 1353 aa9.65□□□□□ -0.87
GGCX-201ENST00000233838 DDX19BQ9UMR2 479 aa9.65□□□□□ -0.87
GGCX-201ENST00000233838 KIF21BO75037 1637 aa9.64□□□□□ -0.87
GGCX-201ENST00000233838 TMEM132AQ24JP5 1023 aa9.64□□□□□ -0.87
GGCX-201ENST00000233838 BRMS1Q9HCU9 246 aa9.64□□□□□ -0.87
GGCX-201ENST00000233838 R3HCC1Q9Y3T6 440 aaKnown RBP9.64□□□□□ -0.87
GGCX-201ENST00000233838 RUSC2Q8N2Y8 1516 aa9.64□□□□□ -0.87
GGCX-201ENST00000233838 RIPK4P57078 832 aa9.64□□□□□ -0.87
GGCX-201ENST00000233838 FKBP5Q13451 457 aaPredicted RBP9.64□□□□□ -0.87
GGCX-201ENST00000233838 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.64□□□□□ -0.87
GGCX-201ENST00000233838 ST20-MTHFSA0A0A6YYL1 179 aa9.64□□□□□ -0.87
GGCX-201ENST00000233838 WASHC4Q2M389 1173 aa9.64□□□□□ -0.87
GGCX-201ENST00000233838 ACBD3Q9H3P7 528 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms