RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 C8orf34Q49A92 452 aa18.4■□□□□ 0.54
SF1-201ENST00000227503 PLCH2O75038 1416 aa18.39■□□□□ 0.53
SF1-201ENST00000227503 PDE3BQ13370 1112 aa18.39■□□□□ 0.53
SF1-201ENST00000227503 PANK3Q9H999 370 aa18.38■□□□□ 0.53
SF1-201ENST00000227503 INSRP06213 1382 aa18.37■□□□□ 0.53
SF1-201ENST00000227503 RNF17Q9BXT8 1623 aaKnown RBP18.37■□□□□ 0.53
SF1-201ENST00000227503 CC2D1BQ5T0F9 858 aaKnown RBP18.36■□□□□ 0.53
SF1-201ENST00000227503 ZMYM4Q5VZL5 1548 aa18.35■□□□□ 0.53
SF1-201ENST00000227503 BLMP54132 1417 aaPredicted RBP18.35■□□□□ 0.53
SF1-201ENST00000227503 TMF1P82094 1093 aa18.35■□□□□ 0.53
SF1-201ENST00000227503 SLKQ9H2G2 1235 aaPredicted RBP18.35■□□□□ 0.53
SF1-201ENST00000227503 ABCC1P33527 1531 aa18.34■□□□□ 0.53
SF1-201ENST00000227503 FAM161AQ3B820 660 aa18.34■□□□□ 0.53
SF1-201ENST00000227503 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
SF1-201ENST00000227503 EFCAB2Q5VUJ9 269 aa18.33■□□□□ 0.53
SF1-201ENST00000227503 VSIG10Q8N0Z9 540 aa18.33■□□□□ 0.52
SF1-201ENST00000227503 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
SF1-201ENST00000227503 ZCCHC11Q5TAX3 1644 aaKnown RBP18.32■□□□□ 0.52
SF1-201ENST00000227503 MADDQ8WXG6 1647 aa18.3■□□□□ 0.52
SF1-201ENST00000227503 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
SF1-201ENST00000227503 WDR7Q9Y4E6 1490 aa18.29■□□□□ 0.52
SF1-201ENST00000227503 NAP1L5Q96NT1 182 aaPredicted RBP18.29■□□□□ 0.52
SF1-201ENST00000227503 IQGAP1P46940 1657 aa18.27■□□□□ 0.52
SF1-201ENST00000227503 TRPM2O94759 1503 aa18.26■□□□□ 0.51
SF1-201ENST00000227503 ZMYND15Q9H091 742 aa18.26■□□□□ 0.51
SF1-201ENST00000227503 SEC24BO95487 1268 aa18.26■□□□□ 0.51
SF1-201ENST00000227503 RTEL1-TNFRSF6BF6WH68 1400 aa18.26■□□□□ 0.51
SF1-201ENST00000227503 CENPQQ7L2Z9 268 aaPredicted RBP18.25■□□□□ 0.51
SF1-201ENST00000227503 PTPRTO14522 1441 aa18.25■□□□□ 0.51
SF1-201ENST00000227503 GZF1Q9H116 711 aaPredicted RBP18.24■□□□□ 0.51
SF1-201ENST00000227503 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
SF1-201ENST00000227503 ZFYVE16Q7Z3T8 1539 aa18.24■□□□□ 0.51
SF1-201ENST00000227503 CLASP1Q7Z460 1538 aa18.24■□□□□ 0.51
SF1-201ENST00000227503 SPRYD3Q8NCJ5 442 aa18.24■□□□□ 0.51
SF1-201ENST00000227503 PANK2Q9BZ23 570 aa18.24■□□□□ 0.51
SF1-201ENST00000227503 SPHKAPQ2M3C7 1700 aa18.23■□□□□ 0.51
SF1-201ENST00000227503 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
SF1-201ENST00000227503 SCAPERQ9BY12 1400 aa18.23■□□□□ 0.51
SF1-201ENST00000227503 ADAMTS8Q9UP79 889 aa18.23■□□□□ 0.51
SF1-201ENST00000227503 CEP152O94986 1710 aa18.22■□□□□ 0.51
SF1-201ENST00000227503 ARAP3Q8WWN8 1544 aa18.22■□□□□ 0.51
SF1-201ENST00000227503 SCAF11Q99590 1463 aaKnown RBP18.22■□□□□ 0.51
SF1-201ENST00000227503 DEPDC5O75140 1603 aa18.22■□□□□ 0.51
SF1-201ENST00000227503 CLTCL1P53675 1640 aa18.22■□□□□ 0.51
SF1-201ENST00000227503 AMER1Q5JTC6 1135 aaPredicted RBP18.21■□□□□ 0.51
SF1-201ENST00000227503 PPP2R1AP30153 589 aa18.21■□□□□ 0.51
SF1-201ENST00000227503 STAC3Q96MF2 364 aa18.21■□□□□ 0.51
SF1-201ENST00000227503 KNSTRNQ9Y448 316 aa18.2■□□□□ 0.5
SF1-201ENST00000227503 SYNMO15061 1565 aa18.2■□□□□ 0.5
SF1-201ENST00000227503 USP19O94966 1318 aa18.19■□□□□ 0.5
SF1-201ENST00000227503 TET3O43151 1660 aa18.17■□□□□ 0.5
SF1-201ENST00000227503 CDCA8Q53HL2 280 aa18.17■□□□□ 0.5
SF1-201ENST00000227503 VWDEQ8N2E2 1590 aa18.17■□□□□ 0.5
SF1-201ENST00000227503 PLEKHH1Q9ULM0 1364 aa18.16■□□□□ 0.5
SF1-201ENST00000227503 XRCC6P12956 609 aaKnown RBP eCLIP18.16■□□□□ 0.51e-7■■■□□ 17.8
SF1-201ENST00000227503 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
SF1-201ENST00000227503 PNNQ9H307 717 aaKnown RBP18.15■□□□□ 0.5
SF1-201ENST00000227503 MYOM1P52179 1685 aa18.15■□□□□ 0.5
SF1-201ENST00000227503 IGHDP01880 384 aa18.15■□□□□ 0.5
SF1-201ENST00000227503 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
SF1-201ENST00000227503 HSP90AA2PQ14568 343 aaPredicted RBP18.14■□□□□ 0.49
SF1-201ENST00000227503 GLIPR1L2Q4G1C9 344 aa18.14■□□□□ 0.49
SF1-201ENST00000227503 INO80Q9ULG1 1556 aaPredicted RBP18.14■□□□□ 0.49
SF1-201ENST00000227503 DUSP27Q5VZP5 1158 aa18.14■□□□□ 0.49
SF1-201ENST00000227503 NPC1L1Q9UHC9 1359 aa18.14■□□□□ 0.49
SF1-201ENST00000227503 PIK3C2GO75747 1445 aa18.13■□□□□ 0.49
SF1-201ENST00000227503 ATP7AQ04656 1500 aa18.13■□□□□ 0.49
SF1-201ENST00000227503 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.49
SF1-201ENST00000227503 KIAA1210Q9ULL0 1709 aa18.13■□□□□ 0.49
SF1-201ENST00000227503 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
SF1-201ENST00000227503 BCAR3O75815 825 aa18.12■□□□□ 0.49
SF1-201ENST00000227503 ABCA9Q8IUA7 1624 aa18.11■□□□□ 0.49
SF1-201ENST00000227503 KANK1Q14678 1352 aa18.11■□□□□ 0.49
SF1-201ENST00000227503 EIF3AQ14152 1382 aaKnown RBP18.11■□□□□ 0.49
SF1-201ENST00000227503 L1TD1Q5T7N2 865 aaKnown RBP18.1■□□□□ 0.49
SF1-201ENST00000227503 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
SF1-201ENST00000227503 FANCAO15360 1455 aa18.1■□□□□ 0.49
SF1-201ENST00000227503 HSP90AA1P07900 732 aaKnown RBP18.1■□□□□ 0.49
SF1-201ENST00000227503 MROH1Q8NDA8 1641 aa18.09■□□□□ 0.49
SF1-201ENST00000227503 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
SF1-201ENST00000227503 KIF3BO15066 747 aa18.09■□□□□ 0.49
SF1-201ENST00000227503 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
SF1-201ENST00000227503 GOLGA2Q08379 1002 aa18.08■□□□□ 0.48
SF1-201ENST00000227503 MYOM2P54296 1465 aa18.07■□□□□ 0.48
SF1-201ENST00000227503 GOLGA6L3A6NEY3 463 aa18.07■□□□□ 0.48
SF1-201ENST00000227503 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
SF1-201ENST00000227503 UGGT1Q9NYU2 1555 aa18.07■□□□□ 0.48
SF1-201ENST00000227503 CFAP70Q5T0N1 1121 aa18.07■□□□□ 0.48
SF1-201ENST00000227503 ERVK-7P63135 1459 aa18.06■□□□□ 0.48
SF1-201ENST00000227503 ABCA6Q8N139 1617 aa18.06■□□□□ 0.48
SF1-201ENST00000227503 ANTXR1Q9H6X2 564 aa18.06■□□□□ 0.48
SF1-201ENST00000227503 ADGRF5Q8IZF2 1346 aa18.05■□□□□ 0.48
SF1-201ENST00000227503 SLFN5Q08AF3 891 aa18.05■□□□□ 0.48
SF1-201ENST00000227503 BECN1Q14457 450 aa18.05■□□□□ 0.48
SF1-201ENST00000227503 TRMT2AQ8IZ69 625 aaKnown RBP18.05■□□□□ 0.48
SF1-201ENST00000227503 ADGRL1O94910 1474 aa18.04■□□□□ 0.48
SF1-201ENST00000227503 TBC1D2Q9BYX2 928 aa18.03■□□□□ 0.48
SF1-201ENST00000227503 ERBB4Q15303 1308 aa18.03■□□□□ 0.48
SF1-201ENST00000227503 CLCN1P35523 988 aa18.02■□□□□ 0.48
SF1-201ENST00000227503 CARD14Q9BXL6 1004 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 216.2 ms