RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 MYOM2P54296 1465 aa20.21■□□□□ 0.83
SEC61B-201ENST00000223641 ZFYVE9O95405 1425 aa20.2■□□□□ 0.82
SEC61B-201ENST00000223641 ARHGAP23Q9P227 1491 aa20.2■□□□□ 0.82
SEC61B-201ENST00000223641 SLIT1O75093 1534 aa20.2■□□□□ 0.82
SEC61B-201ENST00000223641 NRXN1Q9ULB1 1477 aa20.19■□□□□ 0.82
SEC61B-201ENST00000223641 ZNF326Q5BKZ1 582 aaKnown RBP20.19■□□□□ 0.82
SEC61B-201ENST00000223641 THEMISQ8N1K5 641 aaPredicted RBP20.19■□□□□ 0.82
SEC61B-201ENST00000223641 TMEM2Q9UHN6 1383 aa20.19■□□□□ 0.82
SEC61B-201ENST00000223641 RIMS2Q9UQ26 1411 aa20.17■□□□□ 0.82
SEC61B-201ENST00000223641 PRAG1Q86YV5 1406 aa20.16■□□□□ 0.82
SEC61B-201ENST00000223641 NBPF8Q3BBV2 869 aa20.15■□□□□ 0.82
SEC61B-201ENST00000223641 KDM2AQ9Y2K7 1162 aa20.15■□□□□ 0.82
SEC61B-201ENST00000223641 VGFO15240 615 aaPredicted RBP20.14■□□□□ 0.81
SEC61B-201ENST00000223641 ADGRF5Q8IZF2 1346 aa20.13■□□□□ 0.81
SEC61B-201ENST00000223641 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.13■□□□□ 0.81
SEC61B-201ENST00000223641 HDGFP51858 240 aaKnown RBP20.12■□□□□ 0.81
SEC61B-201ENST00000223641 PIK3C2GO75747 1445 aa20.11■□□□□ 0.81
SEC61B-201ENST00000223641 KIAA1210Q9ULL0 1709 aa20.11■□□□□ 0.81
SEC61B-201ENST00000223641 TRPM1Q7Z4N2 1603 aa20.11■□□□□ 0.81
SEC61B-201ENST00000223641 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
SEC61B-201ENST00000223641 LTKP29376 864 aa20.09■□□□□ 0.81
SEC61B-201ENST00000223641 RALGAPBQ86X10 1494 aa20.07■□□□□ 0.8
SEC61B-201ENST00000223641 SCAF11Q99590 1463 aaKnown RBP20.07■□□□□ 0.8
SEC61B-201ENST00000223641 NUTM2DQ5VT03 806 aaPredicted RBP20.07■□□□□ 0.8
SEC61B-201ENST00000223641 SETBP1Q9Y6X0 1596 aa20.07■□□□□ 0.8
SEC61B-201ENST00000223641 NRXN3Q9Y4C0 1643 aa20.06■□□□□ 0.8
SEC61B-201ENST00000223641 TXNDC2Q86VQ3 553 aa20.06■□□□□ 0.8
SEC61B-201ENST00000223641 EID1Q9Y6B2 187 aa20.06■□□□□ 0.8
SEC61B-201ENST00000223641 LAMC1P11047 1609 aa20.05■□□□□ 0.8
SEC61B-201ENST00000223641 C14orf93Q9H972 538 aaKnown RBP20.05■□□□□ 0.8
SEC61B-201ENST00000223641 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
SEC61B-201ENST00000223641 SETD1AO15047 1707 aaKnown RBP20.04■□□□□ 0.8
SEC61B-201ENST00000223641 POLR1AO95602 1720 aaPredicted RBP20.04■□□□□ 0.8
SEC61B-201ENST00000223641 ANKLE2Q86XL3 938 aa20.03■□□□□ 0.8
SEC61B-201ENST00000223641 GPRASP1Q5JY77 1395 aa20.03■□□□□ 0.8
SEC61B-201ENST00000223641 MED14O60244 1454 aa20.03■□□□□ 0.8
SEC61B-201ENST00000223641 ALKQ9UM73 1620 aa20.02■□□□□ 0.8
SEC61B-201ENST00000223641 IQGAP1P46940 1657 aa20.02■□□□□ 0.8
SEC61B-201ENST00000223641 CFAP70Q5T0N1 1121 aa20.01■□□□□ 0.79
SEC61B-201ENST00000223641 NBPF1Q3BBV0 1214 aa20■□□□□ 0.79
SEC61B-201ENST00000223641 ADAMTS13Q76LX8 1427 aa20■□□□□ 0.79
SEC61B-201ENST00000223641 ADGRB1O14514 1584 aa20■□□□□ 0.79
SEC61B-201ENST00000223641 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
SEC61B-201ENST00000223641 ROCK2O75116 1388 aaKnown RBP19.97■□□□□ 0.79
SEC61B-201ENST00000223641 DIP2AQ14689 1571 aa19.97■□□□□ 0.79
SEC61B-201ENST00000223641 HSPA2P54652 639 aa19.97■□□□□ 0.79
SEC61B-201ENST00000223641 STRCQ7RTU9 1775 aa19.97■□□□□ 0.79
SEC61B-201ENST00000223641 TBX22Q9Y458 520 aa19.95■□□□□ 0.78
SEC61B-201ENST00000223641 NPHP4O75161 1426 aaPredicted RBP19.94■□□□□ 0.78
SEC61B-201ENST00000223641 NCKAP5LQ9HCH0 1330 aa19.94■□□□□ 0.78
SEC61B-201ENST00000223641 CARD11Q9BXL7 1154 aa19.92■□□□□ 0.78
SEC61B-201ENST00000223641 METP08581 1390 aa19.91■□□□□ 0.78
SEC61B-201ENST00000223641 TMEM132EQ6IEE7 984 aa19.9■□□□□ 0.78
SEC61B-201ENST00000223641 SLC26A8Q96RN1 970 aa19.89■□□□□ 0.77
SEC61B-201ENST00000223641 PIK3R4Q99570 1358 aa19.89■□□□□ 0.77
SEC61B-201ENST00000223641 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
SEC61B-201ENST00000223641 YTHDC2Q9H6S0 1430 aaKnown RBP19.88■□□□□ 0.77
SEC61B-201ENST00000223641 BCANQ96GW7 911 aa19.88■□□□□ 0.77
SEC61B-201ENST00000223641 LRPPRCP42704 1394 aaKnown RBP19.87■□□□□ 0.77
SEC61B-201ENST00000223641 KNDC1Q76NI1 1749 aa19.87■□□□□ 0.77
SEC61B-201ENST00000223641 ABCC11Q96J66 1382 aa19.86■□□□□ 0.77
SEC61B-201ENST00000223641 USP47Q96K76 1375 aa19.86■□□□□ 0.77
SEC61B-201ENST00000223641 CHD2O14647 1828 aaKnown RBP19.86■□□□□ 0.77
SEC61B-201ENST00000223641 EIF4G2P78344 907 aaKnown RBP eCLIP19.86■□□□□ 0.77
SEC61B-201ENST00000223641 TECPR2O15040 1411 aa19.85■□□□□ 0.77
SEC61B-201ENST00000223641 ARHGEF28Q8N1W1 1705 aaKnown RBP19.85■□□□□ 0.77
SEC61B-201ENST00000223641 DLC1Q96QB1 1528 aa19.85■□□□□ 0.77
SEC61B-201ENST00000223641 PTPRUQ92729 1446 aa19.85■□□□□ 0.77
SEC61B-201ENST00000223641 XRN1Q8IZH2 1706 aaKnown RBP19.83■□□□□ 0.77
SEC61B-201ENST00000223641 HSPA5P11021 654 aaKnown RBP19.82■□□□□ 0.76
SEC61B-201ENST00000223641 SIRT1Q96EB6 747 aa19.82■□□□□ 0.76
SEC61B-201ENST00000223641 CPS1P31327 1500 aa19.81■□□□□ 0.76
SEC61B-201ENST00000223641 AEBP2Q6ZN18 517 aaPredicted RBP19.81■□□□□ 0.76
SEC61B-201ENST00000223641 TRAK1Q9UPV9 953 aa19.81■□□□□ 0.76
SEC61B-201ENST00000223641 NWD1Q149M9 1564 aa19.8■□□□□ 0.76
SEC61B-201ENST00000223641 EIF3AQ14152 1382 aaKnown RBP19.8■□□□□ 0.76
SEC61B-201ENST00000223641 FAM135BQ49AJ0 1406 aa19.79■□□□□ 0.76
SEC61B-201ENST00000223641 ST20-MTHFSA0A0A6YYL1 179 aa19.79■□□□□ 0.76
SEC61B-201ENST00000223641 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
SEC61B-201ENST00000223641 STK26Q9P289 416 aa19.78■□□□□ 0.76
SEC61B-201ENST00000223641 AMOTL2Q9Y2J4 779 aa19.78■□□□□ 0.76
SEC61B-201ENST00000223641 PTCH1Q13635 1447 aa19.77■□□□□ 0.76
SEC61B-201ENST00000223641 SBNO2Q9Y2G9 1366 aa19.77■□□□□ 0.76
SEC61B-201ENST00000223641 KCNA6P17658 529 aa19.76■□□□□ 0.75
SEC61B-201ENST00000223641 TESK2Q96S53 571 aa19.76■□□□□ 0.75
SEC61B-201ENST00000223641 STRCP1A6NGW2 1772 aa19.75■□□□□ 0.75
SEC61B-201ENST00000223641 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
SEC61B-201ENST00000223641 QRICH2Q9H0J4 1663 aa19.75■□□□□ 0.75
SEC61B-201ENST00000223641 ROBO2Q9HCK4 1378 aa19.74■□□□□ 0.75
SEC61B-201ENST00000223641 HIRIP3Q9BW71 556 aaPredicted RBP19.74■□□□□ 0.75
SEC61B-201ENST00000223641 PRAM1Q96QH2 718 aa19.72■□□□□ 0.75
SEC61B-201ENST00000223641 NKTRP30414 1462 aaKnown RBP19.72■□□□□ 0.75
SEC61B-201ENST00000223641 PLEKHH1Q9ULM0 1364 aa19.71■□□□□ 0.75
SEC61B-201ENST00000223641 ZNF316A6NFI3 1004 aaPredicted RBP19.71■□□□□ 0.75
SEC61B-201ENST00000223641 SLC24A1O60721 1099 aa19.71■□□□□ 0.75
SEC61B-201ENST00000223641 WAPLQ7Z5K2 1190 aa19.7■□□□□ 0.74
SEC61B-201ENST00000223641 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.69■□□□□ 0.74
SEC61B-201ENST00000223641 POGKQ9P215 609 aa19.68■□□□□ 0.74
SEC61B-201ENST00000223641 C11orf95C9JLR9 678 aaPredicted RBP19.67■□□□□ 0.74
SEC61B-201ENST00000223641 ADGRB2O60241 1585 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms