RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 NUTM2DQ5VT03 806 aaPredicted RBP17.69■□□□□ 0.42
PLOD3-201ENST00000223127 DISP3Q9P2K9 1392 aa17.69■□□□□ 0.42
PLOD3-201ENST00000223127 MLECQ14165 292 aa17.69■□□□□ 0.42
PLOD3-201ENST00000223127 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
PLOD3-201ENST00000223127 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
PLOD3-201ENST00000223127 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
PLOD3-201ENST00000223127 STAC3Q96MF2 364 aa17.68■□□□□ 0.42
PLOD3-201ENST00000223127 DEKP35659 375 aaKnown RBP17.68■□□□□ 0.42
PLOD3-201ENST00000223127 TMF1P82094 1093 aa17.67■□□□□ 0.42
PLOD3-201ENST00000223127 KIF1BO60333 1816 aa17.67■□□□□ 0.42
PLOD3-201ENST00000223127 NOS1P29475 1434 aa17.66■□□□□ 0.42
PLOD3-201ENST00000223127 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
PLOD3-201ENST00000223127 MROH2AA6NES4 1674 aa17.66■□□□□ 0.42
PLOD3-201ENST00000223127 CAMSAP1Q5T5Y3 1602 aa17.65■□□□□ 0.42
PLOD3-201ENST00000223127 COL17A1Q9UMD9 1497 aaPredicted RBP17.65■□□□□ 0.42
PLOD3-201ENST00000223127 LAMC1P11047 1609 aa17.64■□□□□ 0.41
PLOD3-201ENST00000223127 ZMYM4Q5VZL5 1548 aa17.64■□□□□ 0.41
PLOD3-201ENST00000223127 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.41
PLOD3-201ENST00000223127 IDI1Q13907 227 aa17.63■□□□□ 0.41
PLOD3-201ENST00000223127 SIGLEC1Q9BZZ2 1709 aa17.62■□□□□ 0.41
PLOD3-201ENST00000223127 SCAF11Q99590 1463 aaKnown RBP17.62■□□□□ 0.41
PLOD3-201ENST00000223127 ADGRB3O60242 1522 aa17.61■□□□□ 0.41
PLOD3-201ENST00000223127 KIF13AQ9H1H9 1805 aa17.61■□□□□ 0.41
PLOD3-201ENST00000223127 NOP58Q9Y2X3 529 aaKnown RBP17.61■□□□□ 0.41
PLOD3-201ENST00000223127 MYOM2P54296 1465 aa17.6■□□□□ 0.41
PLOD3-201ENST00000223127 PANK3Q9H999 370 aa17.6■□□□□ 0.41
PLOD3-201ENST00000223127 NEURL4Q96JN8 1562 aa17.59■□□□□ 0.41
PLOD3-201ENST00000223127 TMEM132EQ6IEE7 984 aa17.59■□□□□ 0.41
PLOD3-201ENST00000223127 SYNMO15061 1565 aa17.58■□□□□ 0.41
PLOD3-201ENST00000223127 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.4
PLOD3-201ENST00000223127 ARHGAP31Q2M1Z3 1444 aa17.57■□□□□ 0.4
PLOD3-201ENST00000223127 TRAK1Q9UPV9 953 aa17.57■□□□□ 0.4
PLOD3-201ENST00000223127 CC2D1BQ5T0F9 858 aaKnown RBP17.57■□□□□ 0.4
PLOD3-201ENST00000223127 IQGAP1P46940 1657 aa17.56■□□□□ 0.4
PLOD3-201ENST00000223127 EIF3AQ14152 1382 aaKnown RBP17.56■□□□□ 0.4
PLOD3-201ENST00000223127 SENP3-EIF4A1A0A087X0R7 540 aa17.55■□□□□ 0.4
PLOD3-201ENST00000223127 SLC52A1Q9NWF4 448 aa17.55■□□□□ 0.4
PLOD3-201ENST00000223127 PER1O15534 1290 aaPredicted RBP17.55■□□□□ 0.4
PLOD3-201ENST00000223127 TMC1Q8TDI8 760 aa17.55■□□□□ 0.4
PLOD3-201ENST00000223127 IFT172Q9UG01 1749 aa17.54■□□□□ 0.4
PLOD3-201ENST00000223127 ZC3H13Q5T200 1668 aaKnown RBP17.54■□□□□ 0.4
PLOD3-201ENST00000223127 RPGRIP1LQ68CZ1 1315 aa17.54■□□□□ 0.4
PLOD3-201ENST00000223127 STAG3Q9UJ98 1225 aa17.54■□□□□ 0.4
PLOD3-201ENST00000223127 NBR1Q14596 966 aa17.54■□□□□ 0.4
PLOD3-201ENST00000223127 NRXN1Q9ULB1 1477 aa17.53■□□□□ 0.4
PLOD3-201ENST00000223127 VGFO15240 615 aaPredicted RBP17.53■□□□□ 0.4
PLOD3-201ENST00000223127 C14orf93Q9H972 538 aaKnown RBP17.53■□□□□ 0.4
PLOD3-201ENST00000223127 SMG6Q86US8 1419 aaKnown RBP17.53■□□□□ 0.4
PLOD3-201ENST00000223127 PIK3C2GO75747 1445 aa17.53■□□□□ 0.4
PLOD3-201ENST00000223127 ESF1Q9H501 851 aaKnown RBP17.52■□□□□ 0.4
PLOD3-201ENST00000223127 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
PLOD3-201ENST00000223127 KIAA1210Q9ULL0 1709 aa17.51■□□□□ 0.39
PLOD3-201ENST00000223127 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
PLOD3-201ENST00000223127 RALBP1Q15311 655 aa17.51■□□□□ 0.39
PLOD3-201ENST00000223127 CDCA8Q53HL2 280 aa17.51■□□□□ 0.39
PLOD3-201ENST00000223127 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
PLOD3-201ENST00000223127 PPLO60437 1756 aa17.51■□□□□ 0.39
PLOD3-201ENST00000223127 MYBBP1AQ9BQG0 1328 aaKnown RBP17.5■□□□□ 0.39
PLOD3-201ENST00000223127 PREX1Q8TCU6 1659 aa17.49■□□□□ 0.39
PLOD3-201ENST00000223127 AGLP35573 1532 aa17.49■□□□□ 0.39
PLOD3-201ENST00000223127 CENPJQ9HC77 1338 aaPredicted RBP17.48■□□□□ 0.39
PLOD3-201ENST00000223127 ERVK-7P63135 1459 aa17.48■□□□□ 0.39
PLOD3-201ENST00000223127 ARHGEF40Q8TER5 1519 aa17.47■□□□□ 0.39
PLOD3-201ENST00000223127 CLTCQ00610 1675 aaKnown RBP17.47■□□□□ 0.39
PLOD3-201ENST00000223127 NEXMIFQ5QGS0 1516 aa17.47■□□□□ 0.39
PLOD3-201ENST00000223127 STK26Q9P289 416 aa17.47■□□□□ 0.39
PLOD3-201ENST00000223127 PPP6R1Q9UPN7 881 aa17.47■□□□□ 0.39
PLOD3-201ENST00000223127 REREQ9P2R6 1566 aa17.47■□□□□ 0.39
PLOD3-201ENST00000223127 SAFB2Q14151 953 aaKnown RBP eCLIP17.47■□□□□ 0.39
PLOD3-201ENST00000223127 KNSTRNQ9Y448 316 aa17.47■□□□□ 0.39
PLOD3-201ENST00000223127 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
PLOD3-201ENST00000223127 PNISRQ8TF01 805 aaKnown RBP17.46■□□□□ 0.39
PLOD3-201ENST00000223127 PARD3Q8TEW0 1356 aa17.45■□□□□ 0.38
PLOD3-201ENST00000223127 NLRP13Q86W25 1043 aa17.44■□□□□ 0.38
PLOD3-201ENST00000223127 NUDCQ9Y266 331 aa17.44■□□□□ 0.38
PLOD3-201ENST00000223127 MYO5BQ9ULV0 1848 aa17.43■□□□□ 0.38
PLOD3-201ENST00000223127 ADGRB1O14514 1584 aa17.43■□□□□ 0.38
PLOD3-201ENST00000223127 IPO9Q96P70 1041 aaKnown RBP17.43■□□□□ 0.38
PLOD3-201ENST00000223127 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
PLOD3-201ENST00000223127 ANP32AP39687 249 aaKnown RBP17.42■□□□□ 0.38
PLOD3-201ENST00000223127 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
PLOD3-201ENST00000223127 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
PLOD3-201ENST00000223127 SETBP1Q9Y6X0 1596 aa17.42■□□□□ 0.38
PLOD3-201ENST00000223127 ZMYM3Q14202 1370 aa17.42■□□□□ 0.38
PLOD3-201ENST00000223127 SLC24A1O60721 1099 aa17.41■□□□□ 0.38
PLOD3-201ENST00000223127 CCDC136Q96JN2 1154 aa17.41■□□□□ 0.38
PLOD3-201ENST00000223127 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.37
PLOD3-201ENST00000223127 KDM5AP29375 1690 aaKnown RBP17.38■□□□□ 0.37
PLOD3-201ENST00000223127 SLC12A5Q9H2X9 1139 aa17.37■□□□□ 0.37
PLOD3-201ENST00000223127 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
PLOD3-201ENST00000223127 ZFYVE9O95405 1425 aa17.36■□□□□ 0.37
PLOD3-201ENST00000223127 PRKCSHP14314 528 aaPredicted RBP17.36■□□□□ 0.37
PLOD3-201ENST00000223127 SBNO2Q9Y2G9 1366 aa17.36■□□□□ 0.37
PLOD3-201ENST00000223127 CEBPAP49715 358 aaPredicted RBP17.36■□□□□ 0.37
PLOD3-201ENST00000223127 CARD14Q9BXL6 1004 aa17.36■□□□□ 0.37
PLOD3-201ENST00000223127 RTL5Q5HYW3 569 aaPredicted RBP17.35■□□□□ 0.37
PLOD3-201ENST00000223127 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
PLOD3-201ENST00000223127 A2ML1A8K2U0 1454 aa17.35■□□□□ 0.37
PLOD3-201ENST00000223127 MYOM1P52179 1685 aa17.35■□□□□ 0.37
PLOD3-201ENST00000223127 ZBTB47Q9UFB7 747 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms