RNA–Protein interactions for RNA: ENST00000221784.8

PDCD5-201, Transcript of programmed cell death 5, humanhuman

TSL 3

Gene PDCD5, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-201ENST00000221784 SENP3Q9H4L4 574 aaPredicted RBP21.01■□□□□ 0.95
PDCD5-201ENST00000221784 ABCF1Q8NE71 845 aaKnown RBP eCLIP21■□□□□ 0.95
PDCD5-201ENST00000221784 TMEM94Q12767 1356 aa20.99■□□□□ 0.95
PDCD5-201ENST00000221784 RIMS2Q9UQ26 1411 aa20.99■□□□□ 0.95
PDCD5-201ENST00000221784 ZFYVE9O95405 1425 aa20.98■□□□□ 0.95
PDCD5-201ENST00000221784 PLEKHG1Q9ULL1 1385 aa20.97■□□□□ 0.95
PDCD5-201ENST00000221784 SOCS7O14512 581 aa20.97■□□□□ 0.95
PDCD5-201ENST00000221784 RBM33Q96EV2 1170 aaKnown RBP20.96■□□□□ 0.95
PDCD5-201ENST00000221784 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.95
PDCD5-201ENST00000221784 NUTM2DQ5VT03 806 aaPredicted RBP20.95■□□□□ 0.94
PDCD5-201ENST00000221784 TBX22Q9Y458 520 aa20.95■□□□□ 0.94
PDCD5-201ENST00000221784 GCC2Q8IWJ2 1684 aa20.95■□□□□ 0.94
PDCD5-201ENST00000221784 IQGAP3Q86VI3 1631 aa20.94■□□□□ 0.94
PDCD5-201ENST00000221784 TMEM131LA2VDJ0 1609 aa20.93■□□□□ 0.94
PDCD5-201ENST00000221784 E9PCH4 1651 aa20.92■□□□□ 0.94
PDCD5-201ENST00000221784 FAM135BQ49AJ0 1406 aa20.89■□□□□ 0.94
PDCD5-201ENST00000221784 NKTRP30414 1462 aaKnown RBP20.88■□□□□ 0.93
PDCD5-201ENST00000221784 NAIPQ13075 1403 aa20.87■□□□□ 0.93
PDCD5-201ENST00000221784 MSH6P52701 1360 aa20.86■□□□□ 0.93
PDCD5-201ENST00000221784 ADAMTS13Q76LX8 1427 aa20.86■□□□□ 0.93
PDCD5-201ENST00000221784 ZNF326Q5BKZ1 582 aaKnown RBP20.85■□□□□ 0.93
PDCD5-201ENST00000221784 PHF23Q9BUL5 403 aaPredicted RBP20.85■□□□□ 0.93
PDCD5-201ENST00000221784 XIRP1Q702N8 1843 aaKnown RBP20.85■□□□□ 0.93
PDCD5-201ENST00000221784 NWD1Q149M9 1564 aa20.85■□□□□ 0.93
PDCD5-201ENST00000221784 MED1Q15648 1581 aaPredicted RBP20.85■□□□□ 0.93
PDCD5-201ENST00000221784 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
PDCD5-201ENST00000221784 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
PDCD5-201ENST00000221784 PIK3R4Q99570 1358 aa20.83■□□□□ 0.92
PDCD5-201ENST00000221784 MYO5BQ9ULV0 1848 aa20.83■□□□□ 0.92
PDCD5-201ENST00000221784 C14orf37Q86TY3 774 aa20.82■□□□□ 0.92
PDCD5-201ENST00000221784 AMOTL2Q9Y2J4 779 aa20.81■□□□□ 0.92
PDCD5-201ENST00000221784 NCOA3Q9Y6Q9 1424 aa20.8■□□□□ 0.92
PDCD5-201ENST00000221784 HFM1A2PYH4 1435 aa20.78■□□□□ 0.92
PDCD5-201ENST00000221784 C19orf44Q9H6X5 657 aa20.78■□□□□ 0.92
PDCD5-201ENST00000221784 SLC4A1APQ9BWU0 796 aaKnown RBP20.77■□□□□ 0.92
PDCD5-201ENST00000221784 DIP2AQ14689 1571 aa20.76■□□□□ 0.91
PDCD5-201ENST00000221784 CHD2O14647 1828 aaKnown RBP20.76■□□□□ 0.91
PDCD5-201ENST00000221784 CADPS2Q86UW7 1296 aa20.75■□□□□ 0.91
PDCD5-201ENST00000221784 ATF3P18847 181 aa20.74■□□□□ 0.91
PDCD5-201ENST00000221784 SPHKAPQ2M3C7 1700 aa20.73■□□□□ 0.91
PDCD5-201ENST00000221784 PTPRUQ92729 1446 aa20.73■□□□□ 0.91
PDCD5-201ENST00000221784 TRPM2O94759 1503 aa20.73■□□□□ 0.91
PDCD5-201ENST00000221784 ROBO1Q9Y6N7 1651 aa20.7■□□□□ 0.91
PDCD5-201ENST00000221784 VGFO15240 615 aaPredicted RBP20.7■□□□□ 0.9
PDCD5-201ENST00000221784 METP08581 1390 aa20.7■□□□□ 0.9
PDCD5-201ENST00000221784 SETBP1Q9Y6X0 1596 aa20.68■□□□□ 0.9
PDCD5-201ENST00000221784 CLTCL1P53675 1640 aa20.68■□□□□ 0.9
PDCD5-201ENST00000221784 RGS17Q9UGC6 210 aaPredicted RBP20.68■□□□□ 0.9
PDCD5-201ENST00000221784 RPGRIP1LQ68CZ1 1315 aa20.67■□□□□ 0.9
PDCD5-201ENST00000221784 JCADQ9P266 1359 aa20.65■□□□□ 0.9
PDCD5-201ENST00000221784 FOXD1Q16676 465 aa20.65■□□□□ 0.9
PDCD5-201ENST00000221784 NEXMIFQ5QGS0 1516 aa20.64■□□□□ 0.9
PDCD5-201ENST00000221784 NRXN3Q9Y4C0 1643 aa20.64■□□□□ 0.89
PDCD5-201ENST00000221784 BRINP3Q76B58 766 aa20.62■□□□□ 0.89
PDCD5-201ENST00000221784 MPHOSPH9Q99550 1183 aa20.62■□□□□ 0.89
PDCD5-201ENST00000221784 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.61■□□□□ 0.89
PDCD5-201ENST00000221784 DCCP43146 1447 aa20.61■□□□□ 0.89
PDCD5-201ENST00000221784 XRN1Q8IZH2 1706 aaKnown RBP20.58■□□□□ 0.88
PDCD5-201ENST00000221784 KIF1BO60333 1816 aa20.57■□□□□ 0.88
PDCD5-201ENST00000221784 ACIN1Q9UKV3 1341 aaKnown RBP20.57■□□□□ 0.88
PDCD5-201ENST00000221784 PHLPP1O60346 1717 aa20.57■□□□□ 0.88
PDCD5-201ENST00000221784 RGL3Q3MIN7 710 aa20.57■□□□□ 0.88
PDCD5-201ENST00000221784 POTEAQ6S8J7 498 aa20.57■□□□□ 0.88
PDCD5-201ENST00000221784 SPATA31A6Q5VVP1 1343 aa20.56■□□□□ 0.88
PDCD5-201ENST00000221784 CCDC144AA2RUR9 1427 aa20.56■□□□□ 0.88
PDCD5-201ENST00000221784 MST1RQ04912 1400 aa20.54■□□□□ 0.88
PDCD5-201ENST00000221784 ADGRL3Q9HAR2 1447 aa20.54■□□□□ 0.88
PDCD5-201ENST00000221784 COL16A1Q07092 1604 aaPredicted RBP20.53■□□□□ 0.88
PDCD5-201ENST00000221784 AHDC1Q5TGY3 1603 aaPredicted RBP20.53■□□□□ 0.88
PDCD5-201ENST00000221784 ROBO2Q9HCK4 1378 aa20.52■□□□□ 0.88
PDCD5-201ENST00000221784 ADGRF5Q8IZF2 1346 aa20.52■□□□□ 0.87
PDCD5-201ENST00000221784 MEX3CQ5U5Q3 659 aaKnown RBP20.51■□□□□ 0.87
PDCD5-201ENST00000221784 PTCH1Q13635 1447 aa20.51■□□□□ 0.87
PDCD5-201ENST00000221784 SETD5Q9C0A6 1442 aa20.51■□□□□ 0.87
PDCD5-201ENST00000221784 LRRC59Q96AG4 307 aaKnown RBP20.5■□□□□ 0.87
PDCD5-201ENST00000221784 ANKRD30BQ9BXX2 1392 aa20.49■□□□□ 0.87
PDCD5-201ENST00000221784 ASXL1Q8IXJ9 1541 aa20.48■□□□□ 0.87
PDCD5-201ENST00000221784 SPATA31E1Q6ZUB1 1445 aa20.48■□□□□ 0.87
PDCD5-201ENST00000221784 DDX17Q92841 729 aaKnown RBP20.48■□□□□ 0.87
PDCD5-201ENST00000221784 NUTM2BA6NNL0 878 aaPredicted RBP20.47■□□□□ 0.87
PDCD5-201ENST00000221784 NUTM2EB1AL46 878 aaPredicted RBP20.47■□□□□ 0.87
PDCD5-201ENST00000221784 NUTM2AQ8IVF1 878 aaPredicted RBP20.47■□□□□ 0.87
PDCD5-201ENST00000221784 PRAG1Q86YV5 1406 aa20.46■□□□□ 0.87
PDCD5-201ENST00000221784 C1orf167Q5SNV9 1468 aa20.45■□□□□ 0.86
PDCD5-201ENST00000221784 ZNF772Q68DY9 489 aaPredicted RBP20.45■□□□□ 0.86
PDCD5-201ENST00000221784 ORAI2Q96SN7 254 aa20.45■□□□□ 0.86
PDCD5-201ENST00000221784 STK26Q9P289 416 aa20.45■□□□□ 0.86
PDCD5-201ENST00000221784 LRP6O75581 1613 aa20.45■□□□□ 0.86
PDCD5-201ENST00000221784 PPLO60437 1756 aa20.43■□□□□ 0.86
PDCD5-201ENST00000221784 TMEM132EQ6IEE7 984 aa20.42■□□□□ 0.86
PDCD5-201ENST00000221784 RAB3GAP2Q9H2M9 1393 aa20.42■□□□□ 0.86
PDCD5-201ENST00000221784 SETD1AO15047 1707 aaKnown RBP20.41■□□□□ 0.86
PDCD5-201ENST00000221784 WAPLQ7Z5K2 1190 aa20.41■□□□□ 0.86
PDCD5-201ENST00000221784 LRPPRCP42704 1394 aaKnown RBP20.4■□□□□ 0.86
PDCD5-201ENST00000221784 NALCNQ8IZF0 1738 aa20.4■□□□□ 0.86
PDCD5-201ENST00000221784 ABCC11Q96J66 1382 aa20.4■□□□□ 0.86
PDCD5-201ENST00000221784 SHPRHQ149N8 1683 aa20.39■□□□□ 0.86
PDCD5-201ENST00000221784 SOS2Q07890 1332 aaPredicted RBP20.38■□□□□ 0.85
PDCD5-201ENST00000221784 C14orf93Q9H972 538 aaKnown RBP20.38■□□□□ 0.85
PDCD5-201ENST00000221784 PIK3C2GO75747 1445 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms