RNA–Protein interactions for RNA: ENST00000159111.8

KDM4B-201, Transcript of lysine demethylase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4B, Length 5,593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-201ENST00000159111 CHMP4CQ96CF2 233 aa21.12■□□□□ 0.97
KDM4B-201ENST00000159111 PLEKHH2Q8IVE3 1493 aa21.12■□□□□ 0.97
KDM4B-201ENST00000159111 COG6Q9Y2V7 657 aa21.11■□□□□ 0.97
KDM4B-201ENST00000159111 CCDC9Q9Y3X0 531 aaKnown RBP21.11■□□□□ 0.97
KDM4B-201ENST00000159111 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
KDM4B-201ENST00000159111 HFM1A2PYH4 1435 aa21.09■□□□□ 0.97
KDM4B-201ENST00000159111 RIPK4P57078 832 aa21.09■□□□□ 0.97
KDM4B-201ENST00000159111 DZIP1LQ8IYY4 767 aaKnown RBP21.09■□□□□ 0.97
KDM4B-201ENST00000159111 TEFQ10587 303 aa21.09■□□□□ 0.97
KDM4B-201ENST00000159111 TIAM1Q13009 1591 aa21.08■□□□□ 0.97
KDM4B-201ENST00000159111 ELL2O00472 640 aaPredicted RBP21.08■□□□□ 0.97
KDM4B-201ENST00000159111 TOPBP1Q92547 1522 aa21.08■□□□□ 0.97
KDM4B-201ENST00000159111 FOXD4L1Q9NU39 408 aa21.06■□□□□ 0.96
KDM4B-201ENST00000159111 PRG4Q92954 1404 aaPredicted RBP21.06■□□□□ 0.96
KDM4B-201ENST00000159111 SKOR2Q2VWA4 1001 aaPredicted RBP21.05■□□□□ 0.96
KDM4B-201ENST00000159111 RILPL2Q969X0 211 aa21.05■□□□□ 0.96
KDM4B-201ENST00000159111 NOL8Q76FK4 1167 aaKnown RBP21.05■□□□□ 0.96
KDM4B-201ENST00000159111 GNAI1P63096 354 aa21.05■□□□□ 0.96
KDM4B-201ENST00000159111 DNMBPQ6XZF7 1577 aa21.04■□□□□ 0.96
KDM4B-201ENST00000159111 FANCIQ9NVI1 1328 aa21.04■□□□□ 0.96
KDM4B-201ENST00000159111 SUPT6HQ7KZ85 1726 aaKnown RBP21.04■□□□□ 0.96
KDM4B-201ENST00000159111 SCAPERQ9BY12 1400 aa21.04■□□□□ 0.96
KDM4B-201ENST00000159111 NEXNQ0ZGT2 675 aa21.04■□□□□ 0.96
KDM4B-201ENST00000159111 KIAA1107Q9UPP5 1409 aa21.04■□□□□ 0.96
KDM4B-201ENST00000159111 WASHC2AQ641Q2 1341 aa21.04■□□□□ 0.96
KDM4B-201ENST00000159111 C9orf84Q5VXU9 1444 aa21.03■□□□□ 0.96
KDM4B-201ENST00000159111 ATP6V1DQ9Y5K8 247 aa21.03■□□□□ 0.96
KDM4B-201ENST00000159111 LRRFIP1Q32MZ4 808 aaKnown RBP21.02■□□□□ 0.96
KDM4B-201ENST00000159111 TTC5Q8N0Z6 440 aa21.02■□□□□ 0.96
KDM4B-201ENST00000159111 REC8O95072 547 aa21.02■□□□□ 0.96
KDM4B-201ENST00000159111 RUFY2Q8WXA3 655 aa21.02■□□□□ 0.96
KDM4B-201ENST00000159111 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
KDM4B-201ENST00000159111 FAM69CQ0P6D2 419 aa21.01■□□□□ 0.95
KDM4B-201ENST00000159111 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
KDM4B-201ENST00000159111 TROQ12816 1431 aaPredicted RBP21.01■□□□□ 0.95
KDM4B-201ENST00000159111 CLSTN1O94985 981 aa21■□□□□ 0.95
KDM4B-201ENST00000159111 DIAPH3Q9NSV4 1193 aa20.99■□□□□ 0.95
KDM4B-201ENST00000159111 DDX58O95786 925 aaKnown RBP20.99■□□□□ 0.95
KDM4B-201ENST00000159111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.99■□□□□ 0.952e-6■■■■□ 22.4
KDM4B-201ENST00000159111 C9orf78Q9NZ63 289 aaPredicted RBP20.98■□□□□ 0.95
KDM4B-201ENST00000159111 NESP48681 1621 aa20.97■□□□□ 0.95
KDM4B-201ENST00000159111 PSME1Q06323 249 aa20.97■□□□□ 0.95
KDM4B-201ENST00000159111 EVA1CP58658 441 aa20.97■□□□□ 0.95
KDM4B-201ENST00000159111 H3BQV1 296 aa20.96■□□□□ 0.95
KDM4B-201ENST00000159111 GTF2E1P29083 439 aaPredicted RBP20.96■□□□□ 0.95
KDM4B-201ENST00000159111 IFFO2Q5TF58 517 aa20.96■□□□□ 0.95
KDM4B-201ENST00000159111 EIF2S2P20042 333 aaKnown RBP20.95■□□□□ 0.94
KDM4B-201ENST00000159111 TOMM22Q9NS69 142 aa20.95■□□□□ 0.94
KDM4B-201ENST00000159111 SF3A1Q15459 793 aaKnown RBP20.95■□□□□ 0.94
KDM4B-201ENST00000159111 G3V3G9 751 aa20.94■□□□□ 0.94
KDM4B-201ENST00000159111 FRAT2O75474 233 aaPredicted RBP20.94■□□□□ 0.94
KDM4B-201ENST00000159111 DCAF8Q5TAQ9 597 aa20.94■□□□□ 0.94
KDM4B-201ENST00000159111 DAPK1P53355 1430 aa20.94■□□□□ 0.94
KDM4B-201ENST00000159111 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
KDM4B-201ENST00000159111 FAM184AQ8NB25 1140 aa20.94■□□□□ 0.94
KDM4B-201ENST00000159111 CABP2Q9NPB3 220 aa20.94■□□□□ 0.94
KDM4B-201ENST00000159111 HSP90AB4PQ58FF6 505 aa20.93■□□□□ 0.94
KDM4B-201ENST00000159111 RASSF8Q8NHQ8 419 aa20.93■□□□□ 0.94
KDM4B-201ENST00000159111 TSPYL4Q9UJ04 414 aa20.93■□□□□ 0.94
KDM4B-201ENST00000159111 IFIT2P09913 472 aaKnown RBP20.92■□□□□ 0.94
KDM4B-201ENST00000159111 ZKSCAN1P17029 563 aaPredicted RBP20.92■□□□□ 0.94
KDM4B-201ENST00000159111 DDX49Q9Y6V7 483 aaKnown RBP20.92■□□□□ 0.94
KDM4B-201ENST00000159111 FKBP5Q13451 457 aaPredicted RBP20.91■□□□□ 0.94
KDM4B-201ENST00000159111 INTS3Q68E01 1043 aaKnown RBP20.91■□□□□ 0.94
KDM4B-201ENST00000159111 GGNBP2Q9H3C7 697 aa20.91■□□□□ 0.94
KDM4B-201ENST00000159111 PPP2R1AP30153 589 aa20.91■□□□□ 0.94
KDM4B-201ENST00000159111 AFAP1Q8N556 730 aa20.9■□□□□ 0.94
KDM4B-201ENST00000159111 AMER1Q5JTC6 1135 aaPredicted RBP20.9■□□□□ 0.94
KDM4B-201ENST00000159111 FOXD4L5Q5VV16 416 aaPredicted RBP20.9■□□□□ 0.94
KDM4B-201ENST00000159111 FOXD4L4Q8WXT5 416 aaPredicted RBP20.9■□□□□ 0.94
KDM4B-201ENST00000159111 ADAMTS8Q9UP79 889 aa20.9■□□□□ 0.94
KDM4B-201ENST00000159111 GSE1Q14687 1217 aa20.89■□□□□ 0.94
KDM4B-201ENST00000159111 CUL7Q14999 1698 aa20.88■□□□□ 0.93
KDM4B-201ENST00000159111 SLC4A3P48751 1232 aa20.88■□□□□ 0.93
KDM4B-201ENST00000159111 TMEM132EQ6IEE7 984 aa20.88■□□□□ 0.93
KDM4B-201ENST00000159111 G3BP1Q13283 466 aaKnown RBP eCLIP20.88■□□□□ 0.932e-7■□□□□ 9.3
KDM4B-201ENST00000159111 CFAP70Q5T0N1 1121 aa20.88■□□□□ 0.93
KDM4B-201ENST00000159111 CHMP5Q9NZZ3 219 aa20.88■□□□□ 0.93
KDM4B-201ENST00000159111 HMOX1P09601 288 aa20.87■□□□□ 0.93
KDM4B-201ENST00000159111 RNF20Q5VTR2 975 aa20.87■□□□□ 0.93
KDM4B-201ENST00000159111 SYNE3Q6ZMZ3 975 aa20.87■□□□□ 0.93
KDM4B-201ENST00000159111 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
KDM4B-201ENST00000159111 MTHFSP49914 203 aa20.86■□□□□ 0.93
KDM4B-201ENST00000159111 ANO2Q9NQ90 1003 aa20.86■□□□□ 0.93
KDM4B-201ENST00000159111 AKAP17AQ02040 695 aaKnown RBP20.86■□□□□ 0.93
KDM4B-201ENST00000159111 ERC2O15083 957 aa20.85■□□□□ 0.93
KDM4B-201ENST00000159111 CPLX2Q6PUV4 134 aaKnown RBP20.85■□□□□ 0.93
KDM4B-201ENST00000159111 KIAA0586Q9BVV6 1533 aa20.84■□□□□ 0.93
KDM4B-201ENST00000159111 NECTIN2Q92692 538 aa20.83■□□□□ 0.93
KDM4B-201ENST00000159111 EPRSP07814 1512 aaKnown RBP20.83■□□□□ 0.93
KDM4B-201ENST00000159111 ERBINQ96RT1 1412 aa20.83■□□□□ 0.93
KDM4B-201ENST00000159111 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
KDM4B-201ENST00000159111 TCP11L2Q8N4U5 519 aa20.82■□□□□ 0.92
KDM4B-201ENST00000159111 PANK1Q8TE04 598 aa20.82■□□□□ 0.92
KDM4B-201ENST00000159111 IQGAP2Q13576 1575 aa20.82■□□□□ 0.92
KDM4B-201ENST00000159111 NINLQ9Y2I6 1382 aa20.82■□□□□ 0.92
KDM4B-201ENST00000159111 GAS2L2Q8NHY3 880 aa20.82■□□□□ 0.92
KDM4B-201ENST00000159111 GOLGA6L19H0YKK7 550 aa20.81■□□□□ 0.92
KDM4B-201ENST00000159111 AMOTL1Q8IY63 956 aa20.81■□□□□ 0.92
KDM4B-201ENST00000159111 RPGRIP1LQ68CZ1 1315 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms