RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 ZFYVE9O95405 1425 aa17.45■□□□□ 0.38
NME1-201ENST00000013034 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
NME1-201ENST00000013034 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
NME1-201ENST00000013034 POTEAQ6S8J7 498 aa17.42■□□□□ 0.38
NME1-201ENST00000013034 ANKRD50Q9ULJ7 1429 aa17.41■□□□□ 0.38
NME1-201ENST00000013034 PHLPP1O60346 1717 aa17.41■□□□□ 0.38
NME1-201ENST00000013034 JCADQ9P266 1359 aa17.4■□□□□ 0.38
NME1-201ENST00000013034 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
NME1-201ENST00000013034 GCC2Q8IWJ2 1684 aa17.4■□□□□ 0.38
NME1-201ENST00000013034 RBM33Q96EV2 1170 aaKnown RBP17.4■□□□□ 0.38
NME1-201ENST00000013034 RIMS2Q9UQ26 1411 aa17.39■□□□□ 0.38
NME1-201ENST00000013034 BCANQ96GW7 911 aa17.39■□□□□ 0.37
NME1-201ENST00000013034 DIP2AQ14689 1571 aa17.38■□□□□ 0.37
NME1-201ENST00000013034 TMEM131LA2VDJ0 1609 aa17.38■□□□□ 0.37
NME1-201ENST00000013034 COL16A1Q07092 1604 aaPredicted RBP17.38■□□□□ 0.37
NME1-201ENST00000013034 UNC13BO14795 1591 aa17.37■□□□□ 0.37
NME1-201ENST00000013034 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
NME1-201ENST00000013034 HDGFP51858 240 aaKnown RBP17.37■□□□□ 0.37
NME1-201ENST00000013034 SLAIN2Q9P270 581 aa17.37■□□□□ 0.37
NME1-201ENST00000013034 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
NME1-201ENST00000013034 AHDC1Q5TGY3 1603 aaPredicted RBP17.34■□□□□ 0.37
NME1-201ENST00000013034 PIK3R4Q99570 1358 aa17.34■□□□□ 0.37
NME1-201ENST00000013034 MYO5BQ9ULV0 1848 aa17.33■□□□□ 0.37
NME1-201ENST00000013034 SETD1AO15047 1707 aaKnown RBP17.33■□□□□ 0.37
NME1-201ENST00000013034 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.33■□□□□ 0.36
NME1-201ENST00000013034 TBX22Q9Y458 520 aa17.33■□□□□ 0.36
NME1-201ENST00000013034 ADAMTS13Q76LX8 1427 aa17.32■□□□□ 0.36
NME1-201ENST00000013034 SPATA31A6Q5VVP1 1343 aa17.32■□□□□ 0.36
NME1-201ENST00000013034 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
NME1-201ENST00000013034 LRP6O75581 1613 aa17.31■□□□□ 0.36
NME1-201ENST00000013034 TRPM2O94759 1503 aa17.3■□□□□ 0.36
NME1-201ENST00000013034 E9PCH4 1651 aa17.29■□□□□ 0.36
NME1-201ENST00000013034 SHPRHQ149N8 1683 aa17.29■□□□□ 0.36
NME1-201ENST00000013034 IQGAP3Q86VI3 1631 aa17.29■□□□□ 0.36
NME1-201ENST00000013034 CADPS2Q86UW7 1296 aa17.29■□□□□ 0.36
NME1-201ENST00000013034 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.28■□□□□ 0.36
NME1-201ENST00000013034 C14orf37Q86TY3 774 aa17.28■□□□□ 0.36
NME1-201ENST00000013034 DCCP43146 1447 aa17.28■□□□□ 0.36
NME1-201ENST00000013034 ROCK1Q13464 1354 aa17.27■□□□□ 0.35
NME1-201ENST00000013034 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
NME1-201ENST00000013034 C19orf44Q9H6X5 657 aa17.26■□□□□ 0.35
NME1-201ENST00000013034 ATF3P18847 181 aa17.25■□□□□ 0.35
NME1-201ENST00000013034 MEX3CQ5U5Q3 659 aaKnown RBP17.25■□□□□ 0.35
NME1-201ENST00000013034 ZNF772Q68DY9 489 aaPredicted RBP17.25■□□□□ 0.35
NME1-201ENST00000013034 PTPRUQ92729 1446 aa17.22■□□□□ 0.35
NME1-201ENST00000013034 XRN1Q8IZH2 1706 aaKnown RBP17.22■□□□□ 0.35
NME1-201ENST00000013034 SETBP1Q9Y6X0 1596 aa17.22■□□□□ 0.35
NME1-201ENST00000013034 ASXL1Q8IXJ9 1541 aa17.21■□□□□ 0.35
NME1-201ENST00000013034 CDK12Q9NYV4 1490 aaPredicted RBP17.2■□□□□ 0.34
NME1-201ENST00000013034 NUTM2DQ5VT03 806 aaPredicted RBP17.2■□□□□ 0.34
NME1-201ENST00000013034 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
NME1-201ENST00000013034 NRXN3Q9Y4C0 1643 aa17.2■□□□□ 0.34
NME1-201ENST00000013034 AMOTL2Q9Y2J4 779 aa17.19■□□□□ 0.34
NME1-201ENST00000013034 NUP155O75694 1391 aa17.18■□□□□ 0.34
NME1-201ENST00000013034 SETD5Q9C0A6 1442 aa17.18■□□□□ 0.34
NME1-201ENST00000013034 MST1RQ04912 1400 aa17.17■□□□□ 0.34
NME1-201ENST00000013034 NHSL1Q5SYE7 1610 aa17.17■□□□□ 0.34
NME1-201ENST00000013034 UPF1Q92900 1129 aaKnown RBP eCLIP17.16■□□□□ 0.34
NME1-201ENST00000013034 TRIM52Q96A61 297 aa17.15■□□□□ 0.34
NME1-201ENST00000013034 SPHKAPQ2M3C7 1700 aa17.15■□□□□ 0.34
NME1-201ENST00000013034 ADGRL3Q9HAR2 1447 aa17.14■□□□□ 0.33
NME1-201ENST00000013034 RXRBP28702 533 aa17.14■□□□□ 0.33
NME1-201ENST00000013034 AFF2P51816 1311 aa17.12■□□□□ 0.33
NME1-201ENST00000013034 NUTM2BA6NNL0 878 aaPredicted RBP17.11■□□□□ 0.33
NME1-201ENST00000013034 NUTM2EB1AL46 878 aaPredicted RBP17.11■□□□□ 0.33
NME1-201ENST00000013034 NUTM2AQ8IVF1 878 aaPredicted RBP17.11■□□□□ 0.33
NME1-201ENST00000013034 METP08581 1390 aa17.11■□□□□ 0.33
NME1-201ENST00000013034 NEXMIFQ5QGS0 1516 aa17.1■□□□□ 0.33
NME1-201ENST00000013034 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
NME1-201ENST00000013034 LRRC59Q96AG4 307 aaKnown RBP17.09■□□□□ 0.33
NME1-201ENST00000013034 PNPLA6Q8IY17 1366 aa17.09■□□□□ 0.33
NME1-201ENST00000013034 RGS12O14924 1447 aa17.08■□□□□ 0.32
NME1-201ENST00000013034 PTCH1Q13635 1447 aa17.08■□□□□ 0.32
NME1-201ENST00000013034 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.32
NME1-201ENST00000013034 CLTCL1P53675 1640 aa17.07■□□□□ 0.32
NME1-201ENST00000013034 LAMC1P11047 1609 aa17.07■□□□□ 0.32
NME1-201ENST00000013034 PRAG1Q86YV5 1406 aa17.05■□□□□ 0.32
NME1-201ENST00000013034 C1orf167Q5SNV9 1468 aa17.05■□□□□ 0.32
NME1-201ENST00000013034 ITGAEP38570 1179 aa17.03■□□□□ 0.32
NME1-201ENST00000013034 RBM6P78332 1123 aaKnown RBP17.03■□□□□ 0.32
NME1-201ENST00000013034 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
NME1-201ENST00000013034 DDX17Q92841 729 aaKnown RBP17.01■□□□□ 0.31
NME1-201ENST00000013034 QTRT2Q9H974 415 aaKnown RBP16.99■□□□□ 0.31
NME1-201ENST00000013034 KIF1BO60333 1816 aa16.98■□□□□ 0.31
NME1-201ENST00000013034 SOS2Q07890 1332 aaPredicted RBP16.97■□□□□ 0.31
NME1-201ENST00000013034 HFM1A2PYH4 1435 aa16.97■□□□□ 0.31
NME1-201ENST00000013034 NGLY1Q96IV0 654 aa16.97■□□□□ 0.31
NME1-201ENST00000013034 ATAD2Q6PL18 1390 aa16.97■□□□□ 0.31
NME1-201ENST00000013034 ROBO2Q9HCK4 1378 aa16.97■□□□□ 0.31
NME1-201ENST00000013034 COL22A1Q8NFW1 1626 aaPredicted RBP16.96■□□□□ 0.31
NME1-201ENST00000013034 CDC42BPGQ6DT37 1551 aa16.96■□□□□ 0.31
NME1-201ENST00000013034 NAIPQ13075 1403 aa16.96■□□□□ 0.3
NME1-201ENST00000013034 VGFO15240 615 aaPredicted RBP16.95■□□□□ 0.3
NME1-201ENST00000013034 ADAMTS2O95450 1211 aa16.95■□□□□ 0.3
NME1-201ENST00000013034 RRBP1Q9P2E9 1410 aaKnown RBP16.94■□□□□ 0.3
NME1-201ENST00000013034 MYOM2P54296 1465 aa16.93■□□□□ 0.3
NME1-201ENST00000013034 RPGRIP1LQ68CZ1 1315 aa16.93■□□□□ 0.3
NME1-201ENST00000013034 ORAI2Q96SN7 254 aa16.92■□□□□ 0.3
NME1-201ENST00000013034 USP21Q9UK80 565 aa16.92■□□□□ 0.3
NME1-201ENST00000013034 TRPC5Q9UL62 973 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms