RNA–Protein interactions for RNA: ENSMUST00000226039.1

Trim38-203, Transcript of Tripartite motif-containing 38, mousemouse

APPRIS P1 BASIC

Gene Trim38, Length 1,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38-203ENSMUST00000226039 Clstn2Q9ER65 966 aa10.77□□□□□ -0.68
Trim38-203ENSMUST00000226039 Mbd3Q9Z2D8 285 aaKnown RBP10.77□□□□□ -0.68
Trim38-203ENSMUST00000226039 Cd109Q8R422 1442 aa10.77□□□□□ -0.68
Trim38-203ENSMUST00000226039 Fancd2Q80V62 1450 aa10.77□□□□□ -0.69
Trim38-203ENSMUST00000226039 Pdcd11Q6NS46 1862 aaKnown RBP10.77□□□□□ -0.69
Trim38-203ENSMUST00000226039 Ttll13A4Q9F6 804 aa10.77□□□□□ -0.69
Trim38-203ENSMUST00000226039 Sbno1Q689Z5 1390 aa10.76□□□□□ -0.69
Trim38-203ENSMUST00000226039 Pank3Q8R2W9 370 aa10.76□□□□□ -0.69
Trim38-203ENSMUST00000226039 Zmym3Q9JLM4 1370 aa10.75□□□□□ -0.69
Trim38-203ENSMUST00000226039 ChgaP26339 463 aaKnown RBP10.75□□□□□ -0.69
Trim38-203ENSMUST00000226039 Zbtb22Q9Z0G7 638 aa10.75□□□□□ -0.69
Trim38-203ENSMUST00000226039 Rnf17Q99MV7 1640 aa10.74□□□□□ -0.69
Trim38-203ENSMUST00000226039 Nkx1-2P42580 305 aa10.74□□□□□ -0.69
Trim38-203ENSMUST00000226039 Kdm2bQ6P1G2 1309 aa10.74□□□□□ -0.69
Trim38-203ENSMUST00000226039 Robo2Q7TPD3 1470 aa10.74□□□□□ -0.69
Trim38-203ENSMUST00000226039 Zscan10Q3URR7 782 aa10.74□□□□□ -0.69
Trim38-203ENSMUST00000226039 Rad21Q61550 635 aaKnown RBP10.74□□□□□ -0.69
Trim38-203ENSMUST00000226039 Inpp5dQ9ES52 1191 aa10.73□□□□□ -0.69
Trim38-203ENSMUST00000226039 Kif16bB1AVY7 1312 aa10.73□□□□□ -0.69
Trim38-203ENSMUST00000226039 Hecw1Q8K4P8 1604 aa10.73□□□□□ -0.69
Trim38-203ENSMUST00000226039 Gm14025A2AP89 1413 aa10.73□□□□□ -0.69
Trim38-203ENSMUST00000226039 Cep170Q6A065 1588 aa10.72□□□□□ -0.69
Trim38-203ENSMUST00000226039 Trappc8E9PWG2 1437 aa10.72□□□□□ -0.69
Trim38-203ENSMUST00000226039 Lrriq1Q0P5X1 1673 aa10.72□□□□□ -0.69
Trim38-203ENSMUST00000226039 Gm16486A0A1D5RMD1 1434 aa10.71□□□□□ -0.69
Trim38-203ENSMUST00000226039 Cfap74Q3UY96 1578 aa10.71□□□□□ -0.69
Trim38-203ENSMUST00000226039 Atf7ipQ7TT18 1306 aa10.71□□□□□ -0.7
Trim38-203ENSMUST00000226039 Pola1P33609 1465 aa10.71□□□□□ -0.7
Trim38-203ENSMUST00000226039 Neo1P97798 1493 aa10.71□□□□□ -0.7
Trim38-203ENSMUST00000226039 Arhgap5P97393 1501 aa10.71□□□□□ -0.7
Trim38-203ENSMUST00000226039 Tmf1B9EKI3 1091 aa10.7□□□□□ -0.7
Trim38-203ENSMUST00000226039 Ifit1bl1D3Z6F0 470 aa10.7□□□□□ -0.7
Trim38-203ENSMUST00000226039 Esx1O88933 382 aa10.7□□□□□ -0.7
Trim38-203ENSMUST00000226039 Jph4Q80WT0 628 aa10.7□□□□□ -0.7
Trim38-203ENSMUST00000226039 Rrp7aQ9D1C9 280 aaKnown RBP10.7□□□□□ -0.7
Trim38-203ENSMUST00000226039 Tulp4Q9JIL5 1547 aa10.7□□□□□ -0.7
Trim38-203ENSMUST00000226039 Gtf3c3Q3TMP1 882 aa10.7□□□□□ -0.7
Trim38-203ENSMUST00000226039 Spock2Q9ER58 423 aa10.7□□□□□ -0.7
Trim38-203ENSMUST00000226039 Rusc2Q80U22 1514 aa10.69□□□□□ -0.7
Trim38-203ENSMUST00000226039 Edc4Q3UJB9 1406 aaKnown RBP10.69□□□□□ -0.7
Trim38-203ENSMUST00000226039 Plekhh1Q80TI1 1356 aa10.69□□□□□ -0.7
Trim38-203ENSMUST00000226039 Irx3P81067 507 aa10.69□□□□□ -0.7
Trim38-203ENSMUST00000226039 Rab3gap2Q8BMG7 1366 aa10.69□□□□□ -0.7
Trim38-203ENSMUST00000226039 Ppp2r1aQ76MZ3 589 aa10.68□□□□□ -0.7
Trim38-203ENSMUST00000226039 Cdc42bpbQ7TT50 1713 aa10.68□□□□□ -0.7
Trim38-203ENSMUST00000226039 Zbtb4Q5F293 982 aa10.68□□□□□ -0.7
Trim38-203ENSMUST00000226039 EspnQ9ET47 871 aa10.68□□□□□ -0.7
Trim38-203ENSMUST00000226039 Zbtb12Q9Z150 459 aa10.68□□□□□ -0.7
Trim38-203ENSMUST00000226039 Rwdd1Q9CQK7 243 aa10.67□□□□□ -0.7
Trim38-203ENSMUST00000226039 Abcc3B2RX12 1523 aa10.67□□□□□ -0.7
Trim38-203ENSMUST00000226039 AnkarA2RT91 1465 aa10.67□□□□□ -0.7
Trim38-203ENSMUST00000226039 CrbnQ8C7D2 445 aa10.66□□□□□ -0.7
Trim38-203ENSMUST00000226039 Sart1Q9Z315 806 aaKnown RBP10.66□□□□□ -0.7
Trim38-203ENSMUST00000226039 Itsn2Q9Z0R6 1659 aa10.66□□□□□ -0.7
Trim38-203ENSMUST00000226039 CanxP35564 591 aaKnown RBP10.66□□□□□ -0.7
Trim38-203ENSMUST00000226039 B4galnt3Q6L8S8 986 aa10.66□□□□□ -0.7
Trim38-203ENSMUST00000226039 AI481877A2ALV5 1481 aa10.65□□□□□ -0.7
Trim38-203ENSMUST00000226039 Kiaa1210E9Q0C6 1637 aa10.65□□□□□ -0.7
Trim38-203ENSMUST00000226039 NudcO35685 332 aaKnown RBP10.65□□□□□ -0.7
Trim38-203ENSMUST00000226039 Zbtb7cQ8VCZ7 619 aa10.65□□□□□ -0.7
Trim38-203ENSMUST00000226039 Mkrn3Q60764 544 aa10.65□□□□□ -0.71
Trim38-203ENSMUST00000226039 Smc5Q8CG46 1101 aaKnown RBP10.65□□□□□ -0.71
Trim38-203ENSMUST00000226039 Sart3Q9JLI8 962 aaKnown RBP10.65□□□□□ -0.71
Trim38-203ENSMUST00000226039 Col17a1Q07563 1470 aa10.64□□□□□ -0.71
Trim38-203ENSMUST00000226039 Kif1bQ60575 1816 aaKnown RBP10.64□□□□□ -0.71
Trim38-203ENSMUST00000226039 Mre11Q61216 706 aa10.64□□□□□ -0.71
Trim38-203ENSMUST00000226039 Chmp5Q9D7S9 219 aa10.64□□□□□ -0.71
Trim38-203ENSMUST00000226039 ShprhQ7TPQ3 1674 aa10.64□□□□□ -0.71
Trim38-203ENSMUST00000226039 Uggt2E9Q4X2 1504 aa10.64□□□□□ -0.71
Trim38-203ENSMUST00000226039 Abca17E9PX95 1733 aa10.64□□□□□ -0.71
Trim38-203ENSMUST00000226039 Spag9Q58A65 1321 aaKnown RBP10.64□□□□□ -0.71
Trim38-203ENSMUST00000226039 Fam184bQ0KK56 942 aa10.63□□□□□ -0.71
Trim38-203ENSMUST00000226039 Abcb7Q61102 752 aaKnown RBP10.63□□□□□ -0.71
Trim38-203ENSMUST00000226039 Dnai1Q8C0M8 701 aa10.63□□□□□ -0.71
Trim38-203ENSMUST00000226039 Srcin1Q9QWI6 1250 aa10.63□□□□□ -0.71
Trim38-203ENSMUST00000226039 Usp19Q3UJD6 1360 aa10.63□□□□□ -0.71
Trim38-203ENSMUST00000226039 Mroh3A0A1D5RM54 893 aa10.63□□□□□ -0.71
Trim38-203ENSMUST00000226039 Fkbp15Q6P9Q6 1216 aaKnown RBP10.63□□□□□ -0.71
Trim38-203ENSMUST00000226039 DaxxO35613 739 aa10.62□□□□□ -0.71
Trim38-203ENSMUST00000226039 Nsd2Q8BVE8 1365 aa10.62□□□□□ -0.71
Trim38-203ENSMUST00000226039 Abcc6Q9R1S7 1498 aa10.62□□□□□ -0.71
Trim38-203ENSMUST00000226039 Usp54Q8BL06 1588 aaKnown RBP10.62□□□□□ -0.71
Trim38-203ENSMUST00000226039 Kdm5aQ3UXZ9 1690 aa10.62□□□□□ -0.71
Trim38-203ENSMUST00000226039 Mapk8ip3Q9ESN9 1337 aa10.62□□□□□ -0.71
Trim38-203ENSMUST00000226039 Gtpbp6Q3U6U5 514 aa10.61□□□□□ -0.71
Trim38-203ENSMUST00000226039 NhsB1AV60 1647 aa10.61□□□□□ -0.71
Trim38-203ENSMUST00000226039 Ppm1gQ61074 542 aa10.61□□□□□ -0.71
Trim38-203ENSMUST00000226039 Pdlim2Q8R1G6 349 aa10.61□□□□□ -0.71
Trim38-203ENSMUST00000226039 Abcc1O35379 1528 aa10.61□□□□□ -0.71
Trim38-203ENSMUST00000226039 Dbr1Q923B1 550 aa10.6□□□□□ -0.71
Trim38-203ENSMUST00000226039 AknaQ80VW7 1404 aa10.6□□□□□ -0.71
Trim38-203ENSMUST00000226039 Vsig10D3YX43 558 aa10.59□□□□□ -0.71
Trim38-203ENSMUST00000226039 Tmc1Q8R4P5 757 aa10.59□□□□□ -0.71
Trim38-203ENSMUST00000226039 Ccdc30Q8BVF4 654 aa10.59□□□□□ -0.71
Trim38-203ENSMUST00000226039 Cep152A2AUM9 1736 aaKnown RBP10.58□□□□□ -0.72
Trim38-203ENSMUST00000226039 4933416C03RikQ3V063 378 aa10.58□□□□□ -0.72
Trim38-203ENSMUST00000226039 Speer4f1Q9D5Q6 258 aa10.58□□□□□ -0.72
Trim38-203ENSMUST00000226039 Abca8bQ8K440 1620 aa10.58□□□□□ -0.72
Trim38-203ENSMUST00000226039 Fgd6Q69ZL1 1399 aa10.57□□□□□ -0.72
Trim38-203ENSMUST00000226039 Myom1Q62234 1667 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 95 ms