RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 Rab3gap2Q8BMG7 1366 aa28.11■■■□□ 2.09
Trim9-208ENSMUST00000221370 Usp54Q8BL06 1588 aaKnown RBP28.11■■■□□ 2.09
Trim9-208ENSMUST00000221370 Ppp2r1aQ76MZ3 589 aa28.1■■■□□ 2.09
Trim9-208ENSMUST00000221370 Abca17E9PX95 1733 aa28.1■■■□□ 2.09
Trim9-208ENSMUST00000221370 Esx1O88933 382 aa28.09■■■□□ 2.09
Trim9-208ENSMUST00000221370 Uggt2E9Q4X2 1504 aa28.08■■■□□ 2.09
Trim9-208ENSMUST00000221370 Fam184bQ0KK56 942 aa28.07■■■□□ 2.08
Trim9-208ENSMUST00000221370 Abcc6Q9R1S7 1498 aa28.07■■■□□ 2.08
Trim9-208ENSMUST00000221370 Slc4a1apE9PX68 744 aa28.06■■■□□ 2.08
Trim9-208ENSMUST00000221370 Ak9G3UYQ4 1894 aa28.05■■■□□ 2.08
Trim9-208ENSMUST00000221370 Zmym3Q9JLM4 1370 aa28.05■■■□□ 2.08
Trim9-208ENSMUST00000221370 Ttll13A4Q9F6 804 aa28.04■■■□□ 2.08
Trim9-208ENSMUST00000221370 Ccdc9Q8VC31 543 aaKnown RBP28.04■■■□□ 2.08
Trim9-208ENSMUST00000221370 Map3k5O35099 1380 aa28.03■■■□□ 2.08
Trim9-208ENSMUST00000221370 Plekhh1Q80TI1 1356 aa28.03■■■□□ 2.08
Trim9-208ENSMUST00000221370 Ylpm1Q9R0I7 1386 aaKnown RBP28.03■■■□□ 2.08
Trim9-208ENSMUST00000221370 Atp10dQ8K2X1 1416 aa28.02■■■□□ 2.08
Trim9-208ENSMUST00000221370 Itsn2Q9Z0R6 1659 aa28.01■■■□□ 2.07
Trim9-208ENSMUST00000221370 Kidins220E9Q9B7 1793 aa28■■■□□ 2.07
Trim9-208ENSMUST00000221370 Kdm2bQ6P1G2 1309 aa27.99■■■□□ 2.07
Trim9-208ENSMUST00000221370 Rwdd1Q9CQK7 243 aa27.99■■■□□ 2.07
Trim9-208ENSMUST00000221370 CrbnQ8C7D2 445 aa27.97■■■□□ 2.07
Trim9-208ENSMUST00000221370 Abcc1O35379 1528 aa27.96■■■□□ 2.07
Trim9-208ENSMUST00000221370 Col17a1Q07563 1470 aa27.95■■■□□ 2.06
Trim9-208ENSMUST00000221370 Stard8Q8K031 1019 aa27.95■■■□□ 2.06
Trim9-208ENSMUST00000221370 Iqcf3Q9D498 203 aa27.95■■■□□ 2.06
Trim9-208ENSMUST00000221370 Xrn1P97789 1719 aaKnown RBP27.93■■■□□ 2.06
Trim9-208ENSMUST00000221370 Chd1P40201 1711 aa27.92■■■□□ 2.06
Trim9-208ENSMUST00000221370 Cep152A2AUM9 1736 aaKnown RBP27.91■■■□□ 2.06
Trim9-208ENSMUST00000221370 Kdm2aP59997 1161 aa27.91■■■□□ 2.06
Trim9-208ENSMUST00000221370 Hsp90aa1P07901 733 aaKnown RBP27.9■■■□□ 2.06
Trim9-208ENSMUST00000221370 EspnQ9ET47 871 aa27.88■■■□□ 2.05
Trim9-208ENSMUST00000221370 Myo5cE9Q1F5 1742 aa27.88■■■□□ 2.05
Trim9-208ENSMUST00000221370 Kdm5aQ3UXZ9 1690 aa27.88■■■□□ 2.05
Trim9-208ENSMUST00000221370 Erich6D3Z6S9 713 aa27.87■■■□□ 2.05
Trim9-208ENSMUST00000221370 Igf1rQ60751 1373 aa27.86■■■□□ 2.05
Trim9-208ENSMUST00000221370 ChgaP26339 463 aaKnown RBP27.85■■■□□ 2.05
Trim9-208ENSMUST00000221370 Zfyve16Q80U44 1528 aa27.85■■■□□ 2.05
Trim9-208ENSMUST00000221370 Sall3Q62255 1320 aa27.85■■■□□ 2.05
Trim9-208ENSMUST00000221370 Usp19Q3UJD6 1360 aa27.85■■■□□ 2.05
Trim9-208ENSMUST00000221370 Gm20521D3Z5F7 333 aa27.85■■■□□ 2.05
Trim9-208ENSMUST00000221370 Kif7B7ZNG0 1348 aa27.84■■■□□ 2.05
Trim9-208ENSMUST00000221370 Nos1Q9Z0J4 1429 aa27.84■■■□□ 2.05
Trim9-208ENSMUST00000221370 Nkx1-2P42580 305 aa27.84■■■□□ 2.05
Trim9-208ENSMUST00000221370 Gtf2e1Q9D0D5 440 aa27.84■■■□□ 2.05
Trim9-208ENSMUST00000221370 Tmem131lQ3U3D7 1597 aa27.83■■■□□ 2.05
Trim9-208ENSMUST00000221370 Nphp4P59240 1425 aa27.82■■■□□ 2.04
Trim9-208ENSMUST00000221370 Speer4f1Q9D5Q6 258 aa27.81■■■□□ 2.04
Trim9-208ENSMUST00000221370 Gprasp1Q5U4C1 1347 aa27.81■■■□□ 2.04
Trim9-208ENSMUST00000221370 ErbinQ80TH2 1402 aa27.81■■■□□ 2.04
Trim9-208ENSMUST00000221370 Ccdc30Q8BVF4 654 aa27.8■■■□□ 2.04
Trim9-208ENSMUST00000221370 Ttc21bQ0HA38 1315 aa27.8■■■□□ 2.04
Trim9-208ENSMUST00000221370 Rims1Q99NE5 1463 aa27.8■■■□□ 2.04
Trim9-208ENSMUST00000221370 Iqgap3F8VQ29 1632 aa27.79■■■□□ 2.04
Trim9-208ENSMUST00000221370 Smc5Q8CG46 1101 aaKnown RBP27.79■■■□□ 2.04
Trim9-208ENSMUST00000221370 Fndc1E9Q043 1732 aa27.78■■■□□ 2.04
Trim9-208ENSMUST00000221370 Mapk8ip3Q9ESN9 1337 aa27.78■■■□□ 2.04
Trim9-208ENSMUST00000221370 Chmp5Q9D7S9 219 aa27.78■■■□□ 2.04
Trim9-208ENSMUST00000221370 Os9Q8K2C7 672 aa27.78■■■□□ 2.04
Trim9-208ENSMUST00000221370 B4galnt3Q6L8S8 986 aa27.77■■■□□ 2.04
Trim9-208ENSMUST00000221370 Nlrp6Q91WS2 869 aa27.77■■■□□ 2.04
Trim9-208ENSMUST00000221370 Kif3bQ61771 747 aa27.76■■■□□ 2.03
Trim9-208ENSMUST00000221370 Abca8aQ8K442 1620 aa27.76■■■□□ 2.03
Trim9-208ENSMUST00000221370 Usp40Q8BWR4 1235 aa27.75■■■□□ 2.03
Trim9-208ENSMUST00000221370 Znf608Q56A10 1511 aa27.74■■■□□ 2.03
Trim9-208ENSMUST00000221370 Srpk2O54781 681 aaKnown RBP27.74■■■□□ 2.03
Trim9-208ENSMUST00000221370 Ralbp1Q62172 648 aa27.74■■■□□ 2.03
Trim9-208ENSMUST00000221370 Znf518aB2RRF6 1478 aaKnown RBP27.74■■■□□ 2.03
Trim9-208ENSMUST00000221370 NudcO35685 332 aaKnown RBP27.73■■■□□ 2.03
Trim9-208ENSMUST00000221370 Dcaf11Q91VU6 549 aa27.73■■■□□ 2.03
Trim9-208ENSMUST00000221370 Myo3aQ8K3H5 1613 aa27.73■■■□□ 2.03
Trim9-208ENSMUST00000221370 Talpid3E9PV87 1520 aa27.73■■■□□ 2.03
Trim9-208ENSMUST00000221370 DnmbpQ6TXD4 1580 aa27.72■■■□□ 2.03
Trim9-208ENSMUST00000221370 CanxP35564 591 aaKnown RBP27.72■■■□□ 2.03
Trim9-208ENSMUST00000221370 Golga2Q921M4 999 aa27.72■■■□□ 2.03
Trim9-208ENSMUST00000221370 Abca6Q8K441 1624 aa27.71■■■□□ 2.03
Trim9-208ENSMUST00000221370 Uspl1Q3ULM6 1089 aa27.69■■■□□ 2.02
Trim9-208ENSMUST00000221370 Cdk5rap2Q8K389 1822 aa27.69■■■□□ 2.02
Trim9-208ENSMUST00000221370 Myom1Q62234 1667 aaKnown RBP27.69■■■□□ 2.02
Trim9-208ENSMUST00000221370 KdrP35918 1367 aa27.69■■■□□ 2.02
Trim9-208ENSMUST00000221370 Kiaa1107Q80TK0 1369 aa27.69■■■□□ 2.02
Trim9-208ENSMUST00000221370 Trpm1Q2TV84 1622 aa27.69■■■□□ 2.02
Trim9-208ENSMUST00000221370 AatkQ80YE4 1365 aa27.67■■■□□ 2.02
Trim9-208ENSMUST00000221370 Myom2Q14BI5 1463 aa27.67■■■□□ 2.02
Trim9-208ENSMUST00000221370 Abca9Q8K449 1623 aa27.67■■■□□ 2.02
Trim9-208ENSMUST00000221370 Ppm1gQ61074 542 aa27.67■■■□□ 2.02
Trim9-208ENSMUST00000221370 Fan1Q69ZT1 1020 aa27.67■■■□□ 2.02
Trim9-208ENSMUST00000221370 Dnai1Q8C0M8 701 aa27.66■■■□□ 2.02
Trim9-208ENSMUST00000221370 Adgrb3Q80ZF8 1522 aa27.66■■■□□ 2.02
Trim9-208ENSMUST00000221370 Uggt1Q6P5E4 1551 aa27.65■■■□□ 2.02
Trim9-208ENSMUST00000221370 Map4k4P97820 1233 aaKnown RBP27.65■■■□□ 2.02
Trim9-208ENSMUST00000221370 Neurod2Q62414 383 aa27.64■■■□□ 2.02
Trim9-208ENSMUST00000221370 Stk24Q99KH8 431 aa27.64■■■□□ 2.02
Trim9-208ENSMUST00000221370 Mre11Q61216 706 aa27.64■■■□□ 2.01
Trim9-208ENSMUST00000221370 Dbr1Q923B1 550 aa27.64■■■□□ 2.01
Trim9-208ENSMUST00000221370 AampJ3QN89 436 aa27.63■■■□□ 2.01
Trim9-208ENSMUST00000221370 Apbb1Q9QXJ1 710 aa27.63■■■□□ 2.01
Trim9-208ENSMUST00000221370 Lemd3Q9WU40 921 aa27.63■■■□□ 2.01
Trim9-208ENSMUST00000221370 Tmc1Q8R4P5 757 aa27.62■■■□□ 2.01
Trim9-208ENSMUST00000221370 Topbp1Q6ZQF0 1515 aa27.61■■■□□ 2.01
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms