RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Naip6Q9JIB6 1403 aa13.62□□□□□ -0.23
Trim9-205ENSMUST00000221041 Ipo9Q91YE6 1041 aa13.61□□□□□ -0.23
Trim9-205ENSMUST00000221041 Q9D9H8 365 aa13.61□□□□□ -0.23
Trim9-205ENSMUST00000221041 Mapkbp1Q6NS57 1503 aa13.61□□□□□ -0.23
Trim9-205ENSMUST00000221041 Tmco5bQ80X59 307 aa13.61□□□□□ -0.23
Trim9-205ENSMUST00000221041 Arhgef12Q8R4H2 1543 aaKnown RBP13.61□□□□□ -0.23
Trim9-205ENSMUST00000221041 GsdmaQ9EST1 446 aa13.6□□□□□ -0.23
Trim9-205ENSMUST00000221041 Ccdc27Q3V036 639 aa13.6□□□□□ -0.23
Trim9-205ENSMUST00000221041 EspnQ9ET47 871 aa13.59□□□□□ -0.23
Trim9-205ENSMUST00000221041 Ythdc2B2RR83 1445 aaKnown RBP13.59□□□□□ -0.23
Trim9-205ENSMUST00000221041 Erbb3Q61526 1339 aa13.59□□□□□ -0.23
Trim9-205ENSMUST00000221041 Atxn3Q9CVD2 355 aa13.58□□□□□ -0.23
Trim9-205ENSMUST00000221041 Lrriq1Q0P5X1 1673 aa13.58□□□□□ -0.24
Trim9-205ENSMUST00000221041 RalgapbQ8BQZ4 1484 aa13.58□□□□□ -0.24
Trim9-205ENSMUST00000221041 Rab3gap2Q8BMG7 1366 aa13.58□□□□□ -0.24
Trim9-205ENSMUST00000221041 Prkrip1Q9CWV6 186 aaKnown RBP13.57□□□□□ -0.24
Trim9-205ENSMUST00000221041 Kiaa1551Q5DTW7 1521 aa13.57□□□□□ -0.24
Trim9-205ENSMUST00000221041 Txndc2Q6P902 515 aa13.57□□□□□ -0.24
Trim9-205ENSMUST00000221041 Tspyl2Q7TQI8 677 aa13.57□□□□□ -0.24
Trim9-205ENSMUST00000221041 Bcl11aQ9QYE3 773 aa13.57□□□□□ -0.24
Trim9-205ENSMUST00000221041 U2surpQ6NV83 1029 aaKnown RBP13.56□□□□□ -0.24
Trim9-205ENSMUST00000221041 Kif14L0N7N1 1674 aaKnown RBP13.56□□□□□ -0.24
Trim9-205ENSMUST00000221041 AI481877A2ALV5 1481 aa13.56□□□□□ -0.24
Trim9-205ENSMUST00000221041 Stard8Q8K031 1019 aa13.55□□□□□ -0.24
Trim9-205ENSMUST00000221041 Afap1Q80YS6 731 aa13.55□□□□□ -0.24
Trim9-205ENSMUST00000221041 PtprgQ05909 1442 aa13.55□□□□□ -0.24
Trim9-205ENSMUST00000221041 Hsp90aa1P07901 733 aaKnown RBP13.54□□□□□ -0.24
Trim9-205ENSMUST00000221041 CenpjQ569L8 1344 aa13.54□□□□□ -0.24
Trim9-205ENSMUST00000221041 Spryd3E9Q9B3 442 aa13.54□□□□□ -0.24
Trim9-205ENSMUST00000221041 Sox12Q04890 314 aa13.54□□□□□ -0.24
Trim9-205ENSMUST00000221041 Pibf1E9Q6K3 756 aa13.54□□□□□ -0.24
Trim9-205ENSMUST00000221041 Psme1P97371 249 aa13.53□□□□□ -0.24
Trim9-205ENSMUST00000221041 Mbd3Q9Z2D8 285 aaKnown RBP13.53□□□□□ -0.24
Trim9-205ENSMUST00000221041 Mroh2aD3Z750 1679 aa13.53□□□□□ -0.24
Trim9-205ENSMUST00000221041 Znf608Q56A10 1511 aa13.53□□□□□ -0.24
Trim9-205ENSMUST00000221041 Pprc1Q6NZN1 1644 aa13.53□□□□□ -0.24
Trim9-205ENSMUST00000221041 Supt6hQ62383 1726 aaKnown RBP13.53□□□□□ -0.24
Trim9-205ENSMUST00000221041 Gas2l2Q5SSG4 860 aa13.53□□□□□ -0.24
Trim9-205ENSMUST00000221041 Nutm1Q8BHP2 1126 aa13.52□□□□□ -0.24
Trim9-205ENSMUST00000221041 Igf1rQ60751 1373 aa13.52□□□□□ -0.24
Trim9-205ENSMUST00000221041 Cul7Q8VE73 1689 aa13.52□□□□□ -0.25
Trim9-205ENSMUST00000221041 Atp2b2Q9R0K7 1198 aa13.52□□□□□ -0.25
Trim9-205ENSMUST00000221041 Lrrc9Q8CDN9 1456 aa13.52□□□□□ -0.25
Trim9-205ENSMUST00000221041 Cpsf1Q9EPU4 1441 aaKnown RBP13.52□□□□□ -0.25
Trim9-205ENSMUST00000221041 Nectin2P32507 530 aa13.51□□□□□ -0.25
Trim9-205ENSMUST00000221041 Abcc1O35379 1528 aa13.51□□□□□ -0.25
Trim9-205ENSMUST00000221041 Rusc2Q80U22 1514 aa13.5□□□□□ -0.25
Trim9-205ENSMUST00000221041 Ralbp1Q62172 648 aa13.5□□□□□ -0.25
Trim9-205ENSMUST00000221041 Dnai1Q8C0M8 701 aa13.5□□□□□ -0.25
Trim9-205ENSMUST00000221041 Vsig10D3YX43 558 aa13.49□□□□□ -0.25
Trim9-205ENSMUST00000221041 Ccdc60Q8C4J0 545 aa13.49□□□□□ -0.25
Trim9-205ENSMUST00000221041 Eif2s2Q99L45 331 aaKnown RBP13.49□□□□□ -0.25
Trim9-205ENSMUST00000221041 Cdc42bpaQ3UU96 1719 aa13.49□□□□□ -0.25
Trim9-205ENSMUST00000221041 Egfem1Q8C088 590 aa13.49□□□□□ -0.25
Trim9-205ENSMUST00000221041 Sart3Q9JLI8 962 aaKnown RBP13.49□□□□□ -0.25
Trim9-205ENSMUST00000221041 Kank1E9Q238 1360 aa13.49□□□□□ -0.25
Trim9-205ENSMUST00000221041 DroshaQ5HZJ0 1373 aaKnown RBP13.48□□□□□ -0.25
Trim9-205ENSMUST00000221041 Setd1bQ8CFT2 1985 aa13.48□□□□□ -0.25
Trim9-205ENSMUST00000221041 MyclP10166 368 aa13.48□□□□□ -0.25
Trim9-205ENSMUST00000221041 Ak7Q9D2H2 614 aa13.47□□□□□ -0.25
Trim9-205ENSMUST00000221041 Ppm1gQ61074 542 aa13.47□□□□□ -0.25
Trim9-205ENSMUST00000221041 Edc4Q3UJB9 1406 aaKnown RBP13.47□□□□□ -0.25
Trim9-205ENSMUST00000221041 Map3k4O08648 1597 aa13.47□□□□□ -0.25
Trim9-205ENSMUST00000221041 Fhod3Q76LL6 1578 aa13.46□□□□□ -0.25
Trim9-205ENSMUST00000221041 Plekhh1Q80TI1 1356 aa13.46□□□□□ -0.25
Trim9-205ENSMUST00000221041 Adgrl2Q8JZZ7 1487 aa13.46□□□□□ -0.25
Trim9-205ENSMUST00000221041 Tarbp1E9Q368 1579 aa13.46□□□□□ -0.26
Trim9-205ENSMUST00000221041 Ccar1Q8CH18 1146 aaKnown RBP13.46□□□□□ -0.26
Trim9-205ENSMUST00000221041 KarsQ99MN1 595 aaKnown RBP13.46□□□□□ -0.26
Trim9-205ENSMUST00000221041 Ylpm1Q9R0I7 1386 aaKnown RBP13.45□□□□□ -0.26
Trim9-205ENSMUST00000221041 Cald1E9QA15 768 aaKnown RBP13.45□□□□□ -0.26
Trim9-205ENSMUST00000221041 Fgd1P52734 960 aa13.45□□□□□ -0.26
Trim9-205ENSMUST00000221041 Setbp1Q9Z180 1582 aa13.45□□□□□ -0.26
Trim9-205ENSMUST00000221041 Gsto1O09131 240 aa13.45□□□□□ -0.26
Trim9-205ENSMUST00000221041 NudcO35685 332 aaKnown RBP13.45□□□□□ -0.26
Trim9-205ENSMUST00000221041 Dusp27Q148W8 1138 aa13.45□□□□□ -0.26
Trim9-205ENSMUST00000221041 Mfap1aC0HKD8 439 aaKnown RBP13.44□□□□□ -0.26
Trim9-205ENSMUST00000221041 Mfap1bC0HKD9 439 aaKnown RBP13.44□□□□□ -0.26
Trim9-205ENSMUST00000221041 Ipo8Q7TMY7 1010 aa13.44□□□□□ -0.26
Trim9-205ENSMUST00000221041 Gm156Q58A37 223 aa13.43□□□□□ -0.26
Trim9-205ENSMUST00000221041 Trim58Q5NCC9 485 aa13.43□□□□□ -0.26
Trim9-205ENSMUST00000221041 Cdk19Q8BWD8 501 aa13.43□□□□□ -0.26
Trim9-205ENSMUST00000221041 Fam208aQ69ZR9 1610 aaKnown RBP13.41□□□□□ -0.26
Trim9-205ENSMUST00000221041 Pbrm1Q8BSQ9 1634 aaKnown RBP13.41□□□□□ -0.26
Trim9-205ENSMUST00000221041 Mbd5B1AYB6 1498 aa13.41□□□□□ -0.26
Trim9-205ENSMUST00000221041 Dot1lQ6XZL8 1540 aa13.4□□□□□ -0.26
Trim9-205ENSMUST00000221041 Fmn2Q9JL04 1578 aa13.4□□□□□ -0.26
Trim9-205ENSMUST00000221041 AatkQ80YE4 1365 aa13.39□□□□□ -0.27
Trim9-205ENSMUST00000221041 GorabQ8BRM2 368 aa13.39□□□□□ -0.27
Trim9-205ENSMUST00000221041 Abcc6Q9R1S7 1498 aa13.39□□□□□ -0.27
Trim9-205ENSMUST00000221041 G3bp1P97855 465 aaKnown RBP13.39□□□□□ -0.27
Trim9-205ENSMUST00000221041 Tnnt1O88346 262 aa13.39□□□□□ -0.27
Trim9-205ENSMUST00000221041 Uspl1Q3ULM6 1089 aa13.38□□□□□ -0.27
Trim9-205ENSMUST00000221041 Zmym4A2A791 1549 aaKnown RBP13.38□□□□□ -0.27
Trim9-205ENSMUST00000221041 Rbm25B2RY56 838 aaKnown RBP13.38□□□□□ -0.27
Trim9-205ENSMUST00000221041 DekQ7TNV0 380 aaKnown RBP13.37□□□□□ -0.27
Trim9-205ENSMUST00000221041 Dnmt1P13864 1620 aaKnown RBP13.37□□□□□ -0.27
Trim9-205ENSMUST00000221041 Asxl2Q8BZ32 1370 aa13.37□□□□□ -0.27
Trim9-205ENSMUST00000221041 Ptch1Q61115 1434 aa13.36□□□□□ -0.27
Trim9-205ENSMUST00000221041 OvosQ3UU35 1456 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms