RNA–Protein interactions for RNA: ENSMUST00000172159.7

Traf1-207, Transcript of TNF receptor-associated factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1-207ENSMUST00000172159 Nsd2Q8BVE8 1365 aa13.43□□□□□ -0.26
Traf1-207ENSMUST00000172159 Ncbp3Q8BZR9 615 aaKnown RBP13.42□□□□□ -0.26
Traf1-207ENSMUST00000172159 Adamts7Q68SA9 1657 aa13.42□□□□□ -0.26
Traf1-207ENSMUST00000172159 Yeats2Q3TUF7 1407 aa13.42□□□□□ -0.26
Traf1-207ENSMUST00000172159 Ino80Q6ZPV2 1559 aa13.42□□□□□ -0.26
Traf1-207ENSMUST00000172159 Ppargc1bQ8VHJ7 1014 aa13.41□□□□□ -0.26
Traf1-207ENSMUST00000172159 Mug2P28666 1451 aa13.41□□□□□ -0.26
Traf1-207ENSMUST00000172159 Qser1A2BIE1 1698 aa13.41□□□□□ -0.26
Traf1-207ENSMUST00000172159 Adamts13Q769J6 1426 aa13.41□□□□□ -0.26
Traf1-207ENSMUST00000172159 Cpsf1Q9EPU4 1441 aaKnown RBP13.41□□□□□ -0.26
Traf1-207ENSMUST00000172159 Ehbp1l1Q99MS7 1716 aa13.4□□□□□ -0.26
Traf1-207ENSMUST00000172159 Samd1D3YXK1 519 aa13.4□□□□□ -0.26
Traf1-207ENSMUST00000172159 Dnttip2Q8R2M2 758 aaKnown RBP13.4□□□□□ -0.26
Traf1-207ENSMUST00000172159 Q8BT18 775 aa13.39□□□□□ -0.27
Traf1-207ENSMUST00000172159 Tecpr2Q3UH45 1423 aa13.39□□□□□ -0.27
Traf1-207ENSMUST00000172159 Gm13697A2AK42 830 aa13.38□□□□□ -0.27
Traf1-207ENSMUST00000172159 Ppp1r18Q8BQ30 594 aa13.38□□□□□ -0.27
Traf1-207ENSMUST00000172159 Ccdc27Q3V036 639 aa13.38□□□□□ -0.27
Traf1-207ENSMUST00000172159 Fbxo3Q9DC63 480 aa13.38□□□□□ -0.27
Traf1-207ENSMUST00000172159 DmtnQ9WV69 405 aa13.38□□□□□ -0.27
Traf1-207ENSMUST00000172159 Cdk13Q69ZA1 1511 aaKnown RBP13.37□□□□□ -0.27
Traf1-207ENSMUST00000172159 NeflP08551 543 aa13.37□□□□□ -0.27
Traf1-207ENSMUST00000172159 Kif3bQ61771 747 aa13.37□□□□□ -0.27
Traf1-207ENSMUST00000172159 Tnnt3Q9QZ47 272 aa13.37□□□□□ -0.27
Traf1-207ENSMUST00000172159 Adgrb3Q80ZF8 1522 aa13.36□□□□□ -0.27
Traf1-207ENSMUST00000172159 Tulp4Q9JIL5 1547 aa13.36□□□□□ -0.27
Traf1-207ENSMUST00000172159 Cfap65Q3V0B4 1847 aa13.36□□□□□ -0.27
Traf1-207ENSMUST00000172159 Washc2Q6PGL7 1334 aa13.36□□□□□ -0.27
Traf1-207ENSMUST00000172159 Polr3aB2RXC6 1390 aa13.35□□□□□ -0.27
Traf1-207ENSMUST00000172159 Armcx1Q9CX83 456 aa13.35□□□□□ -0.27
Traf1-207ENSMUST00000172159 Efcab6Q6P1E8 1516 aa13.34□□□□□ -0.27
Traf1-207ENSMUST00000172159 RalgapbQ8BQZ4 1484 aa13.34□□□□□ -0.27
Traf1-207ENSMUST00000172159 Ttc21bQ0HA38 1315 aa13.33□□□□□ -0.28
Traf1-207ENSMUST00000172159 Abcc6Q9R1S7 1498 aa13.33□□□□□ -0.28
Traf1-207ENSMUST00000172159 RictorQ6QI06 1708 aa13.33□□□□□ -0.28
Traf1-207ENSMUST00000172159 Uggt1Q6P5E4 1551 aa13.33□□□□□ -0.28
Traf1-207ENSMUST00000172159 Adamtsl3G3UXC7 1706 aa13.32□□□□□ -0.28
Traf1-207ENSMUST00000172159 Talpid3E9PV87 1520 aa13.32□□□□□ -0.28
Traf1-207ENSMUST00000172159 Cep152A2AUM9 1736 aaKnown RBP13.31□□□□□ -0.28
Traf1-207ENSMUST00000172159 Knl1Q66JQ7 1612 aa13.31□□□□□ -0.28
Traf1-207ENSMUST00000172159 Zbtb7cQ8VCZ7 619 aa13.31□□□□□ -0.28
Traf1-207ENSMUST00000172159 Arhgap23Q69ZH9 1483 aa13.31□□□□□ -0.28
Traf1-207ENSMUST00000172159 Ncoa1P70365 1447 aa13.3□□□□□ -0.28
Traf1-207ENSMUST00000172159 DekQ7TNV0 380 aaKnown RBP13.3□□□□□ -0.28
Traf1-207ENSMUST00000172159 Setd1aE9PYH6 1716 aa13.3□□□□□ -0.28
Traf1-207ENSMUST00000172159 Znf692Q3U381 531 aa13.29□□□□□ -0.28
Traf1-207ENSMUST00000172159 Rgl3Q3UYI5 709 aa13.29□□□□□ -0.28
Traf1-207ENSMUST00000172159 Dapk1Q80YE7 1442 aa13.29□□□□□ -0.28
Traf1-207ENSMUST00000172159 CltcQ68FD5 1675 aaKnown RBP13.28□□□□□ -0.28
Traf1-207ENSMUST00000172159 Myom2Q14BI5 1463 aa13.28□□□□□ -0.28
Traf1-207ENSMUST00000172159 Myom1Q62234 1667 aaKnown RBP13.28□□□□□ -0.28
Traf1-207ENSMUST00000172159 Rims1Q99NE5 1463 aa13.28□□□□□ -0.28
Traf1-207ENSMUST00000172159 NpatQ8BMA5 1420 aa13.28□□□□□ -0.28
Traf1-207ENSMUST00000172159 Sipa1l1Q8C0T5 1782 aa13.28□□□□□ -0.28
Traf1-207ENSMUST00000172159 Plxnc1Q9QZC2 1574 aa13.27□□□□□ -0.28
Traf1-207ENSMUST00000172159 Pdcl3Q8BVF2 240 aa13.27□□□□□ -0.28
Traf1-207ENSMUST00000172159 Cdk5rap2Q8K389 1822 aa13.27□□□□□ -0.29
Traf1-207ENSMUST00000172159 Mroh1E0CZ22 1640 aa13.26□□□□□ -0.29
Traf1-207ENSMUST00000172159 Hsp90aa1P07901 733 aaKnown RBP13.26□□□□□ -0.29
Traf1-207ENSMUST00000172159 Supt16hQ920B9 1047 aa13.25□□□□□ -0.29
Traf1-207ENSMUST00000172159 Tubgcp6G5E8P0 1769 aa13.24□□□□□ -0.29
Traf1-207ENSMUST00000172159 Ythdc1E9Q5K9 736 aaKnown RBP13.24□□□□□ -0.29
Traf1-207ENSMUST00000172159 Znf326O88291 580 aa13.24□□□□□ -0.29
Traf1-207ENSMUST00000172159 Podxl2Q8CAE9 603 aa13.24□□□□□ -0.29
Traf1-207ENSMUST00000172159 Itsn1Q9Z0R4 1714 aa13.23□□□□□ -0.29
Traf1-207ENSMUST00000172159 Zfp91Q62511 572 aa13.23□□□□□ -0.29
Traf1-207ENSMUST00000172159 Ahdc1Q6PAL7 1594 aaKnown RBP13.23□□□□□ -0.29
Traf1-207ENSMUST00000172159 Kif13aQ9EQW7 1749 aa13.23□□□□□ -0.29
Traf1-207ENSMUST00000172159 AatkQ80YE4 1365 aa13.22□□□□□ -0.29
Traf1-207ENSMUST00000172159 ErbinQ80TH2 1402 aa13.22□□□□□ -0.29
Traf1-207ENSMUST00000172159 Dnajc5P60904 198 aa13.21□□□□□ -0.29
Traf1-207ENSMUST00000172159 Sin3aQ60520 1274 aaKnown RBP13.21□□□□□ -0.29
Traf1-207ENSMUST00000172159 Kdm5aQ3UXZ9 1690 aa13.21□□□□□ -0.29
Traf1-207ENSMUST00000172159 Ift172Q6VH22 1749 aa13.2□□□□□ -0.3
Traf1-207ENSMUST00000172159 Pola1P33609 1465 aa13.2□□□□□ -0.3
Traf1-207ENSMUST00000172159 DnmbpQ6TXD4 1580 aa13.2□□□□□ -0.3
Traf1-207ENSMUST00000172159 Sall3Q62255 1320 aa13.2□□□□□ -0.3
Traf1-207ENSMUST00000172159 Zbtb4Q5F293 982 aa13.2□□□□□ -0.3
Traf1-207ENSMUST00000172159 Hfm1D3Z4R1 1434 aa13.2□□□□□ -0.3
Traf1-207ENSMUST00000172159 Myo3aQ8K3H5 1613 aa13.2□□□□□ -0.3
Traf1-207ENSMUST00000172159 Skint5A7XUY5 1461 aa13.19□□□□□ -0.3
Traf1-207ENSMUST00000172159 Slc4a1apE9PX68 744 aa13.19□□□□□ -0.3
Traf1-207ENSMUST00000172159 Rundc1Q0VDN7 615 aa13.18□□□□□ -0.3
Traf1-207ENSMUST00000172159 Med14A2ABV5 1459 aaKnown RBP13.18□□□□□ -0.3
Traf1-207ENSMUST00000172159 Itsn2Q9Z0R6 1659 aa13.17□□□□□ -0.3
Traf1-207ENSMUST00000172159 4933416C03RikQ3V063 378 aa13.17□□□□□ -0.3
Traf1-207ENSMUST00000172159 Grwd1Q810D6 446 aaKnown RBP13.17□□□□□ -0.3
Traf1-207ENSMUST00000172159 PtprmP28828 1452 aa13.16□□□□□ -0.3
Traf1-207ENSMUST00000172159 Dnajc5gQ8C632 165 aa13.16□□□□□ -0.3
Traf1-207ENSMUST00000172159 Gtf2a1Q99PM3 378 aa13.16□□□□□ -0.3
Traf1-207ENSMUST00000172159 Cwc22Q8C5N3 908 aaKnown RBP13.15□□□□□ -0.3
Traf1-207ENSMUST00000172159 Mroh3A0A1D5RM54 893 aa13.15□□□□□ -0.3
Traf1-207ENSMUST00000172159 AcrbpQ3V140 540 aa13.15□□□□□ -0.3
Traf1-207ENSMUST00000172159 MaddQ80U28 1577 aa13.15□□□□□ -0.31
Traf1-207ENSMUST00000172159 Card11Q8CIS0 1159 aa13.14□□□□□ -0.31
Traf1-207ENSMUST00000172159 Chmp4bQ9D8B3 224 aaKnown RBP13.14□□□□□ -0.31
Traf1-207ENSMUST00000172159 Chd2E9PZM4 1827 aaKnown RBP13.14□□□□□ -0.31
Traf1-207ENSMUST00000172159 Rock2P70336 1388 aa13.14□□□□□ -0.31
Traf1-207ENSMUST00000172159 Ifit1bl1D3Z6F0 470 aa13.14□□□□□ -0.31
Traf1-207ENSMUST00000172159 Plekhg5Q66T02 1073 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 101.1 ms