RNA–Protein interactions for RNA: ENSMUST00000115578.9

Ufd1-202, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ufd1, Length 2,078 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-202ENSMUST00000115578 Dapk1Q80YE7 1442 aa15.67■□□□□ 0.1
Ufd1-202ENSMUST00000115578 RalgapbQ8BQZ4 1484 aa15.67■□□□□ 0.1
Ufd1-202ENSMUST00000115578 Myom2Q14BI5 1463 aa15.66■□□□□ 0.1
Ufd1-202ENSMUST00000115578 Sin3aQ60520 1274 aaKnown RBP15.66■□□□□ 0.1
Ufd1-202ENSMUST00000115578 Grwd1Q810D6 446 aaKnown RBP15.66■□□□□ 0.1
Ufd1-202ENSMUST00000115578 ErbinQ80TH2 1402 aa15.65■□□□□ 0.1
Ufd1-202ENSMUST00000115578 Uggt1Q6P5E4 1551 aa15.64■□□□□ 0.09
Ufd1-202ENSMUST00000115578 AatkQ80YE4 1365 aa15.64■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Erich6D3Z6S9 713 aa15.63■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Anp32aO35381 247 aa15.63■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Afap1Q80YS6 731 aa15.63■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Ahdc1Q6PAL7 1594 aaKnown RBP15.62■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Rims1Q99NE5 1463 aa15.62■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Mroh1E0CZ22 1640 aa15.62■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Fam71e1A1L3C1 212 aa15.62■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Hfm1D3Z4R1 1434 aa15.62■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Ncoa1P70365 1447 aa15.61■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Hdac5Q9Z2V6 1113 aa15.61■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Skint5A7XUY5 1461 aa15.61■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Cep152A2AUM9 1736 aaKnown RBP15.61■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Myom1Q62234 1667 aaKnown RBP15.6■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Mroh3A0A1D5RM54 893 aa15.6■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Kif13aQ9EQW7 1749 aa15.6■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Itsn1Q9Z0R4 1714 aa15.59■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Cdk5rap2Q8K389 1822 aa15.59■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Ifit1bl1D3Z6F0 470 aa15.59■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Rundc1Q0VDN7 615 aa15.59■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Stk24Q99KH8 431 aa15.58■□□□□ 0.09
Ufd1-202ENSMUST00000115578 Plxnc1Q9QZC2 1574 aa15.58■□□□□ 0.08
Ufd1-202ENSMUST00000115578 Myo3aQ8K3H5 1613 aa15.57■□□□□ 0.08
Ufd1-202ENSMUST00000115578 Sipa1l1Q8C0T5 1782 aa15.55■□□□□ 0.08
Ufd1-202ENSMUST00000115578 PtprmP28828 1452 aa15.55■□□□□ 0.08
Ufd1-202ENSMUST00000115578 Card11Q8CIS0 1159 aa15.55■□□□□ 0.08
Ufd1-202ENSMUST00000115578 Med14A2ABV5 1459 aaKnown RBP15.54■□□□□ 0.08
Ufd1-202ENSMUST00000115578 Setd1aE9PYH6 1716 aa15.54■□□□□ 0.08
Ufd1-202ENSMUST00000115578 Rsph4aQ8BYM7 716 aa15.53■□□□□ 0.08
Ufd1-202ENSMUST00000115578 Ercc6l2Q9JIM3 1537 aa15.53■□□□□ 0.08
Ufd1-202ENSMUST00000115578 AU022751B1B0V2 589 aa15.52■□□□□ 0.08
Ufd1-202ENSMUST00000115578 Mapk8ip2Q9ERE9 830 aa15.5■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Chd2E9PZM4 1827 aaKnown RBP15.49■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Plppr3Q7TPB0 716 aa15.48■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Pola1P33609 1465 aa15.48■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Prrc2bQ7TPM1 1486 aaKnown RBP15.48■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Dip2bQ3UH60 1574 aa15.48■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Naip7Q9JIB3 1402 aa15.48■□□□□ 0.07
Ufd1-202ENSMUST00000115578 DnmbpQ6TXD4 1580 aa15.47■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Tubgcp6G5E8P0 1769 aa15.47■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Kdm5aQ3UXZ9 1690 aa15.47■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Gm38655A0A286YDK6 273 aa15.47■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Cwc22Q8C5N3 908 aaKnown RBP15.47■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Ift172Q6VH22 1749 aa15.46■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Znf710Q3U288 666 aa15.46■□□□□ 0.07
Ufd1-202ENSMUST00000115578 Alpk3Q924C5 1678 aa15.45■□□□□ 0.06
Ufd1-202ENSMUST00000115578 Zc3h13E9Q784 1729 aaKnown RBP15.45■□□□□ 0.06
Ufd1-202ENSMUST00000115578 Kdm2aP59997 1161 aa15.44■□□□□ 0.06
Ufd1-202ENSMUST00000115578 Arhgef28P97433 1693 aa15.43■□□□□ 0.06
Ufd1-202ENSMUST00000115578 Itsn2Q9Z0R6 1659 aa15.43■□□□□ 0.06
Ufd1-202ENSMUST00000115578 Rock2P70336 1388 aa15.42■□□□□ 0.06
Ufd1-202ENSMUST00000115578 Plekhg5Q66T02 1073 aa15.42■□□□□ 0.06
Ufd1-202ENSMUST00000115578 PplQ9R269 1755 aa15.41■□□□□ 0.06
Ufd1-202ENSMUST00000115578 Nphp4P59240 1425 aa15.41■□□□□ 0.06
Ufd1-202ENSMUST00000115578 MaddQ80U28 1577 aa15.41■□□□□ 0.06
Ufd1-202ENSMUST00000115578 Fan1Q69ZT1 1020 aa15.4■□□□□ 0.06
Ufd1-202ENSMUST00000115578 Fgd1P52734 960 aa15.39■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Eif2ak4Q9QZ05 1648 aa15.38■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Lrrc7Q80TE7 1490 aa15.38■□□□□ 0.05
Ufd1-202ENSMUST00000115578 CatipB9EKE5 520 aa15.38■□□□□ 0.05
Ufd1-202ENSMUST00000115578 SafbD3YXK2 937 aaKnown RBP15.38■□□□□ 0.05
Ufd1-202ENSMUST00000115578 NrdcQ8BHG1 1161 aa15.38■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Gm20521D3Z5F7 333 aa15.37■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Srpk2O54781 681 aaKnown RBP15.37■□□□□ 0.05
Ufd1-202ENSMUST00000115578 4930407I10RikD3Z5T8 1512 aa15.37■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Puf60Q3UEB3 564 aaKnown RBP15.36■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Srcin1Q9QWI6 1250 aa15.36■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Gemin5Q8BX17 1502 aaKnown RBP15.36■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Slc52a2Q9D8F3 450 aa15.35■□□□□ 0.05
Ufd1-202ENSMUST00000115578 PalldQ9ET54 1408 aa15.34■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Zbtb4Q5F293 982 aa15.34■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Usp40Q8BWR4 1235 aa15.34■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Smg6P61406 1418 aaKnown RBP15.33■□□□□ 0.05
Ufd1-202ENSMUST00000115578 Safb2Q80YR5 991 aaKnown RBP15.33■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Pknox2Q8BG99 474 aa15.32■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Os9Q8K2C7 672 aa15.32■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Dip2aQ8BWT5 1523 aa15.32■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Bcl9Q9D219 1425 aa15.32■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Cep170bQ80U49 1574 aa15.31■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Calr4Q3TQS0 420 aa15.31■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Sbno1Q689Z5 1390 aa15.3■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Stard8Q8K031 1019 aa15.3■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Topaz1E5FYH1 1653 aa15.29■□□□□ 0.04
Ufd1-202ENSMUST00000115578 IghaA0A0A6YXW6 389 aa15.29■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Gtf2e1Q9D0D5 440 aa15.29■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Shq1Q7TMX5 569 aa15.28■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Abca14E9Q8F8 1683 aa15.27■□□□□ 0.04
Ufd1-202ENSMUST00000115578 Slit3Q9WVB4 1523 aa15.27■□□□□ 0.03
Ufd1-202ENSMUST00000115578 PrxO55103 1391 aa15.26■□□□□ 0.03
Ufd1-202ENSMUST00000115578 Q9D9H8 365 aa15.26■□□□□ 0.03
Ufd1-202ENSMUST00000115578 Asxl2Q8BZ32 1370 aa15.25■□□□□ 0.03
Ufd1-202ENSMUST00000115578 Ccdc9Q8VC31 543 aaKnown RBP15.24■□□□□ 0.03
Ufd1-202ENSMUST00000115578 Nwd1A6H603 1563 aa15.23■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms