RNA–Protein interactions for RNA: ENSMUST00000102501.9

Vps39-202, Transcript of Vam6/Vps39-like protein, mousemouse

TSL 1 (best) BASIC

Gene Vps39, Length 4,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39-202ENSMUST00000102501 1700019A02RikA0A087WPV9 146 aa9.7□□□□□ -0.86
Vps39-202ENSMUST00000102501 Ylpm1Q9R0I7 1386 aaKnown RBP9.69□□□□□ -0.86
Vps39-202ENSMUST00000102501 Trim30dE9PWL0 497 aa9.69□□□□□ -0.86
Vps39-202ENSMUST00000102501 Gcc2Q8CHG3 1679 aa9.69□□□□□ -0.86
Vps39-202ENSMUST00000102501 Dbr1Q923B1 550 aa9.69□□□□□ -0.86
Vps39-202ENSMUST00000102501 Speer4f1Q9D5Q6 258 aa9.69□□□□□ -0.86
Vps39-202ENSMUST00000102501 Yeats2Q3TUF7 1407 aa9.69□□□□□ -0.86
Vps39-202ENSMUST00000102501 B4galnt3Q6L8S8 986 aa9.68□□□□□ -0.86
Vps39-202ENSMUST00000102501 CanxP35564 591 aaKnown RBP9.67□□□□□ -0.86
Vps39-202ENSMUST00000102501 Supt16hQ920B9 1047 aa9.67□□□□□ -0.86
Vps39-202ENSMUST00000102501 Cdc42bpaQ3UU96 1719 aa9.67□□□□□ -0.86
Vps39-202ENSMUST00000102501 Mapk8ip3Q9ESN9 1337 aa9.67□□□□□ -0.86
Vps39-202ENSMUST00000102501 Stard8Q8K031 1019 aa9.66□□□□□ -0.86
Vps39-202ENSMUST00000102501 Rwdd1Q9CQK7 243 aa9.66□□□□□ -0.86
Vps39-202ENSMUST00000102501 Nolc1E9Q5C9 702 aaKnown RBP9.66□□□□□ -0.86
Vps39-202ENSMUST00000102501 Cdk19Q8BWD8 501 aa9.66□□□□□ -0.86
Vps39-202ENSMUST00000102501 Fam208aQ69ZR9 1610 aaKnown RBP9.66□□□□□ -0.86
Vps39-202ENSMUST00000102501 PrxO55103 1391 aa9.66□□□□□ -0.86
Vps39-202ENSMUST00000102501 Gsto1O09131 240 aa9.66□□□□□ -0.86
Vps39-202ENSMUST00000102501 Polr3aB2RXC6 1390 aa9.65□□□□□ -0.86
Vps39-202ENSMUST00000102501 Armcx1Q9CX83 456 aa9.65□□□□□ -0.87
Vps39-202ENSMUST00000102501 Adgrl2Q8JZZ7 1487 aa9.65□□□□□ -0.87
Vps39-202ENSMUST00000102501 Gm6268A2A3U9 297 aa9.64□□□□□ -0.87
Vps39-202ENSMUST00000102501 Golga2Q921M4 999 aa9.64□□□□□ -0.87
Vps39-202ENSMUST00000102501 PtprgQ05909 1442 aa9.64□□□□□ -0.87
Vps39-202ENSMUST00000102501 Znf518aB2RRF6 1478 aaKnown RBP9.64□□□□□ -0.87
Vps39-202ENSMUST00000102501 Cabp4Q8VHC5 271 aa9.64□□□□□ -0.87
Vps39-202ENSMUST00000102501 Tsen2Q6P7W5 460 aa9.63□□□□□ -0.87
Vps39-202ENSMUST00000102501 Gli2Q0VGT2 1544 aa9.63□□□□□ -0.87
Vps39-202ENSMUST00000102501 Cdk13Q69ZA1 1511 aaKnown RBP9.63□□□□□ -0.87
Vps39-202ENSMUST00000102501 Cfap74Q3UY96 1578 aa9.63□□□□□ -0.87
Vps39-202ENSMUST00000102501 Mug2P28666 1451 aa9.63□□□□□ -0.87
Vps39-202ENSMUST00000102501 Hsp90ab1P11499 724 aaKnown RBP9.63□□□□□ -0.87
Vps39-202ENSMUST00000102501 Evi5lH3BKQ3 813 aa9.62□□□□□ -0.87
Vps39-202ENSMUST00000102501 Plekhg5Q66T02 1073 aa9.62□□□□□ -0.87
Vps39-202ENSMUST00000102501 Naip6Q9JIB6 1403 aa9.62□□□□□ -0.87
Vps39-202ENSMUST00000102501 Pibf1E9Q6K3 756 aa9.62□□□□□ -0.87
Vps39-202ENSMUST00000102501 AatkQ80YE4 1365 aa9.62□□□□□ -0.87
Vps39-202ENSMUST00000102501 Ap3b2Q9JME5 1082 aa9.62□□□□□ -0.87
Vps39-202ENSMUST00000102501 Ppp2r1aQ76MZ3 589 aa9.61□□□□□ -0.87
Vps39-202ENSMUST00000102501 Edc4Q3UJB9 1406 aaKnown RBP9.61□□□□□ -0.87
Vps39-202ENSMUST00000102501 Ncoa1P70365 1447 aa9.61□□□□□ -0.87
Vps39-202ENSMUST00000102501 U2surpQ6NV83 1029 aaKnown RBP9.61□□□□□ -0.87
Vps39-202ENSMUST00000102501 Chd1P40201 1711 aa9.6□□□□□ -0.87
Vps39-202ENSMUST00000102501 Rock1P70335 1354 aa9.6□□□□□ -0.87
Vps39-202ENSMUST00000102501 Gm21190A0A0G2JGJ6 266 aa9.6□□□□□ -0.87
Vps39-202ENSMUST00000102501 Apaf1O88879 1249 aa9.6□□□□□ -0.87
Vps39-202ENSMUST00000102501 Cfap65Q3V0B4 1847 aa9.6□□□□□ -0.87
Vps39-202ENSMUST00000102501 PnisrA2AJT4 805 aaKnown RBP9.6□□□□□ -0.87
Vps39-202ENSMUST00000102501 AU022751B1B0V2 589 aa9.59□□□□□ -0.87
Vps39-202ENSMUST00000102501 4930567H17RikQ3V0K5 233 aa9.59□□□□□ -0.87
Vps39-202ENSMUST00000102501 Fgd1P52734 960 aa9.59□□□□□ -0.87
Vps39-202ENSMUST00000102501 Slc52a2Q9D8F3 450 aa9.59□□□□□ -0.87
Vps39-202ENSMUST00000102501 Fmn2Q9JL04 1578 aa9.59□□□□□ -0.87
Vps39-202ENSMUST00000102501 Zfyve16Q80U44 1528 aa9.59□□□□□ -0.87
Vps39-202ENSMUST00000102501 Asxl1P59598 1514 aa9.58□□□□□ -0.88
Vps39-202ENSMUST00000102501 DroshaQ5HZJ0 1373 aaKnown RBP9.58□□□□□ -0.88
Vps39-202ENSMUST00000102501 Chmp5Q9D7S9 219 aa9.58□□□□□ -0.88
Vps39-202ENSMUST00000102501 Mbd3Q9Z2D8 285 aaKnown RBP9.58□□□□□ -0.88
Vps39-202ENSMUST00000102501 NpatQ8BMA5 1420 aa9.58□□□□□ -0.88
Vps39-202ENSMUST00000102501 Znf330Q922H9 316 aa9.58□□□□□ -0.88
Vps39-202ENSMUST00000102501 GsdmaQ9EST1 446 aa9.58□□□□□ -0.88
Vps39-202ENSMUST00000102501 NhsB1AV60 1647 aa9.57□□□□□ -0.88
Vps39-202ENSMUST00000102501 Usp54Q8BL06 1588 aaKnown RBP9.57□□□□□ -0.88
Vps39-202ENSMUST00000102501 GphnQ8BUV3 769 aaKnown RBP9.57□□□□□ -0.88
Vps39-202ENSMUST00000102501 Tarbp1E9Q368 1579 aa9.56□□□□□ -0.88
Vps39-202ENSMUST00000102501 Prrc2bQ7TPM1 1486 aaKnown RBP9.56□□□□□ -0.88
Vps39-202ENSMUST00000102501 Tnnt1O88346 262 aa9.56□□□□□ -0.88
Vps39-202ENSMUST00000102501 Ksr2Q3UVC0 959 aa9.56□□□□□ -0.88
Vps39-202ENSMUST00000102501 Tmco5bQ80X59 307 aa9.56□□□□□ -0.88
Vps39-202ENSMUST00000102501 Abcc6Q9R1S7 1498 aa9.56□□□□□ -0.88
Vps39-202ENSMUST00000102501 Supt6hQ62383 1726 aaKnown RBP9.55□□□□□ -0.88
Vps39-202ENSMUST00000102501 Q3UJC8 639 aa9.55□□□□□ -0.88
Vps39-202ENSMUST00000102501 Zcchc11B2RX14 1644 aaKnown RBP9.55□□□□□ -0.88
Vps39-202ENSMUST00000102501 Ak9G3UYQ4 1894 aa9.54□□□□□ -0.88
Vps39-202ENSMUST00000102501 Gm10563F6WIE4 79 aa9.54□□□□□ -0.88
Vps39-202ENSMUST00000102501 Hsp90aa1P07901 733 aaKnown RBP9.54□□□□□ -0.88
Vps39-202ENSMUST00000102501 Bcl11bQ99PV8 884 aa9.54□□□□□ -0.88
Vps39-202ENSMUST00000102501 Camsap2Q8C1B1 1461 aa9.54□□□□□ -0.88
Vps39-202ENSMUST00000102501 Cyb5rlB1AS42 316 aa9.54□□□□□ -0.88
Vps39-202ENSMUST00000102501 Nos1Q9Z0J4 1429 aa9.54□□□□□ -0.88
Vps39-202ENSMUST00000102501 Abca8bQ8K440 1620 aa9.54□□□□□ -0.88
Vps39-202ENSMUST00000102501 NudcO35685 332 aaKnown RBP9.53□□□□□ -0.88
Vps39-202ENSMUST00000102501 Dnajc5P60904 198 aa9.53□□□□□ -0.88
Vps39-202ENSMUST00000102501 Col17a1Q07563 1470 aa9.53□□□□□ -0.88
Vps39-202ENSMUST00000102501 Synj2Q9D2G5 1434 aa9.53□□□□□ -0.88
Vps39-202ENSMUST00000102501 Zfp444Q3TDV8 331 aaKnown RBP9.53□□□□□ -0.88
Vps39-202ENSMUST00000102501 Tmem94Q7TSH8 1360 aa9.53□□□□□ -0.88
Vps39-202ENSMUST00000102501 Abcc3B2RX12 1523 aa9.52□□□□□ -0.88
Vps39-202ENSMUST00000102501 Fyb1O35601 819 aa9.52□□□□□ -0.88
Vps39-202ENSMUST00000102501 GnpatP98192 678 aa9.52□□□□□ -0.88
Vps39-202ENSMUST00000102501 Ccdc27Q3V036 639 aa9.52□□□□□ -0.88
Vps39-202ENSMUST00000102501 Ggt6Q6PDE7 497 aa9.52□□□□□ -0.88
Vps39-202ENSMUST00000102501 MpripP97434 1024 aa9.52□□□□□ -0.89
Vps39-202ENSMUST00000102501 EspnQ9ET47 871 aa9.52□□□□□ -0.89
Vps39-202ENSMUST00000102501 Kif16bB1AVY7 1312 aa9.52□□□□□ -0.89
Vps39-202ENSMUST00000102501 Hfm1D3Z4R1 1434 aa9.51□□□□□ -0.89
Vps39-202ENSMUST00000102501 Rnf17Q99MV7 1640 aa9.51□□□□□ -0.89
Vps39-202ENSMUST00000102501 Ppm1gQ61074 542 aa9.51□□□□□ -0.89
Vps39-202ENSMUST00000102501 RalgapbQ8BQZ4 1484 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms