RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Myom3A2ABU4 1439 aa13.98□□□□□ -0.17
Tro-201ENSMUST00000087253 Map4P27546 1125 aaKnown RBP13.98□□□□□ -0.17
Tro-201ENSMUST00000087253 Ehbp1l1Q99MS7 1716 aa13.97□□□□□ -0.17
Tro-201ENSMUST00000087253 Ino80Q6ZPV2 1559 aa13.97□□□□□ -0.17
Tro-201ENSMUST00000087253 Upf2A2AT37 1269 aaKnown RBP13.97□□□□□ -0.17
Tro-201ENSMUST00000087253 Dip2cE9PWR4 1557 aa13.97□□□□□ -0.17
Tro-201ENSMUST00000087253 Tecpr2Q3UH45 1423 aa13.97□□□□□ -0.17
Tro-201ENSMUST00000087253 Col17a1Q07563 1470 aa13.96□□□□□ -0.18
Tro-201ENSMUST00000087253 Rpgrip1lQ8CG73 1264 aa13.96□□□□□ -0.18
Tro-201ENSMUST00000087253 Spag9Q58A65 1321 aaKnown RBP13.95□□□□□ -0.18
Tro-201ENSMUST00000087253 Tulp4Q9JIL5 1547 aa13.95□□□□□ -0.18
Tro-201ENSMUST00000087253 Adamts7Q68SA9 1657 aa13.95□□□□□ -0.18
Tro-201ENSMUST00000087253 Clstn2Q9ER65 966 aa13.95□□□□□ -0.18
Tro-201ENSMUST00000087253 ChgaP26339 463 aaKnown RBP13.94□□□□□ -0.18
Tro-201ENSMUST00000087253 OvosQ3UU35 1456 aa13.94□□□□□ -0.18
Tro-201ENSMUST00000087253 Sipa1l1Q8C0T5 1782 aa13.94□□□□□ -0.18
Tro-201ENSMUST00000087253 Ylpm1Q9R0I7 1386 aaKnown RBP13.93□□□□□ -0.18
Tro-201ENSMUST00000087253 Gm156Q58A37 223 aa13.93□□□□□ -0.18
Tro-201ENSMUST00000087253 Anp32bQ9EST5 272 aaKnown RBP13.93□□□□□ -0.18
Tro-201ENSMUST00000087253 Cep152A2AUM9 1736 aaKnown RBP13.93□□□□□ -0.18
Tro-201ENSMUST00000087253 Rrp7aQ9D1C9 280 aaKnown RBP13.92□□□□□ -0.18
Tro-201ENSMUST00000087253 Map3k5O35099 1380 aa13.91□□□□□ -0.18
Tro-201ENSMUST00000087253 Nsd2Q8BVE8 1365 aa13.91□□□□□ -0.18
Tro-201ENSMUST00000087253 Erbb3Q61526 1339 aa13.91□□□□□ -0.18
Tro-201ENSMUST00000087253 Hecw2Q6I6G8 1578 aa13.91□□□□□ -0.18
Tro-201ENSMUST00000087253 Adgrb3Q80ZF8 1522 aa13.91□□□□□ -0.18
Tro-201ENSMUST00000087253 Hdac5Q9Z2V6 1113 aa13.91□□□□□ -0.18
Tro-201ENSMUST00000087253 Q7TT23 1179 aa13.91□□□□□ -0.18
Tro-201ENSMUST00000087253 Zfp444Q3TDV8 331 aaKnown RBP13.9□□□□□ -0.18
Tro-201ENSMUST00000087253 Pde4cQ3UEI1 686 aa13.9□□□□□ -0.18
Tro-201ENSMUST00000087253 Pola1P33609 1465 aa13.9□□□□□ -0.19
Tro-201ENSMUST00000087253 Zmym4A2A791 1549 aaKnown RBP13.89□□□□□ -0.19
Tro-201ENSMUST00000087253 Efcab6Q6P1E8 1516 aa13.89□□□□□ -0.19
Tro-201ENSMUST00000087253 Hsp90aa1P07901 733 aaKnown RBP13.88□□□□□ -0.19
Tro-201ENSMUST00000087253 Zscan21Q07231 555 aa13.88□□□□□ -0.19
Tro-201ENSMUST00000087253 Uggt1Q6P5E4 1551 aa13.88□□□□□ -0.19
Tro-201ENSMUST00000087253 Cdk5rap2Q8K389 1822 aa13.88□□□□□ -0.19
Tro-201ENSMUST00000087253 DaxxO35613 739 aa13.88□□□□□ -0.19
Tro-201ENSMUST00000087253 4933416C03RikQ3V063 378 aa13.88□□□□□ -0.19
Tro-201ENSMUST00000087253 B4galnt3Q6L8S8 986 aa13.88□□□□□ -0.19
Tro-201ENSMUST00000087253 Gli2Q0VGT2 1544 aa13.87□□□□□ -0.19
Tro-201ENSMUST00000087253 Abcc6Q9R1S7 1498 aa13.87□□□□□ -0.19
Tro-201ENSMUST00000087253 Mak16Q8BGS0 296 aaKnown RBP13.86□□□□□ -0.19
Tro-201ENSMUST00000087253 Rims1Q99NE5 1463 aa13.86□□□□□ -0.19
Tro-201ENSMUST00000087253 Ift172Q6VH22 1749 aa13.86□□□□□ -0.19
Tro-201ENSMUST00000087253 Myom1Q62234 1667 aaKnown RBP13.86□□□□□ -0.19
Tro-201ENSMUST00000087253 DnmbpQ6TXD4 1580 aa13.86□□□□□ -0.19
Tro-201ENSMUST00000087253 Plxnc1Q9QZC2 1574 aa13.85□□□□□ -0.19
Tro-201ENSMUST00000087253 Myom2Q14BI5 1463 aa13.84□□□□□ -0.19
Tro-201ENSMUST00000087253 Dbr1Q923B1 550 aa13.84□□□□□ -0.19
Tro-201ENSMUST00000087253 Ptch1Q61115 1434 aa13.83□□□□□ -0.2
Tro-201ENSMUST00000087253 Itsn2Q9Z0R6 1659 aa13.83□□□□□ -0.2
Tro-201ENSMUST00000087253 Kank1E9Q238 1360 aa13.82□□□□□ -0.2
Tro-201ENSMUST00000087253 Iqcf3Q9D498 203 aa13.82□□□□□ -0.2
Tro-201ENSMUST00000087253 Apbb1Q9QXJ1 710 aa13.81□□□□□ -0.2
Tro-201ENSMUST00000087253 Synj2Q9D2G5 1434 aa13.81□□□□□ -0.2
Tro-201ENSMUST00000087253 Rock2P70336 1388 aa13.81□□□□□ -0.2
Tro-201ENSMUST00000087253 Lemd3Q9WU40 921 aa13.8□□□□□ -0.2
Tro-201ENSMUST00000087253 CanxP35564 591 aaKnown RBP13.8□□□□□ -0.2
Tro-201ENSMUST00000087253 Pank3Q8R2W9 370 aa13.8□□□□□ -0.2
Tro-201ENSMUST00000087253 Ttll13A4Q9F6 804 aa13.79□□□□□ -0.2
Tro-201ENSMUST00000087253 Prkrip1Q9CWV6 186 aaKnown RBP13.79□□□□□ -0.2
Tro-201ENSMUST00000087253 Inpp5dQ9ES52 1191 aa13.79□□□□□ -0.2
Tro-201ENSMUST00000087253 Mroh1E0CZ22 1640 aa13.79□□□□□ -0.2
Tro-201ENSMUST00000087253 Esx1O88933 382 aa13.79□□□□□ -0.2
Tro-201ENSMUST00000087253 CrbnQ8C7D2 445 aa13.79□□□□□ -0.2
Tro-201ENSMUST00000087253 Arhgap23Q69ZH9 1483 aa13.78□□□□□ -0.2
Tro-201ENSMUST00000087253 Ttc21bQ0HA38 1315 aa13.78□□□□□ -0.2
Tro-201ENSMUST00000087253 Ifit1bl1D3Z6F0 470 aa13.77□□□□□ -0.21
Tro-201ENSMUST00000087253 RictorQ6QI06 1708 aa13.77□□□□□ -0.21
Tro-201ENSMUST00000087253 Talpid3E9PV87 1520 aa13.77□□□□□ -0.21
Tro-201ENSMUST00000087253 Knl1Q66JQ7 1612 aa13.76□□□□□ -0.21
Tro-201ENSMUST00000087253 Amer1Q7TS75 1132 aa13.76□□□□□ -0.21
Tro-201ENSMUST00000087253 Arid3cA6PWV5 409 aa13.75□□□□□ -0.21
Tro-201ENSMUST00000087253 Gtf3c3Q3TMP1 882 aa13.75□□□□□ -0.21
Tro-201ENSMUST00000087253 Yeats2Q3TUF7 1407 aa13.74□□□□□ -0.21
Tro-201ENSMUST00000087253 Kdm5aQ3UXZ9 1690 aa13.74□□□□□ -0.21
Tro-201ENSMUST00000087253 MaddQ80U28 1577 aa13.74□□□□□ -0.21
Tro-201ENSMUST00000087253 Myo3aQ8K3H5 1613 aa13.74□□□□□ -0.21
Tro-201ENSMUST00000087253 Qser1A2BIE1 1698 aa13.73□□□□□ -0.21
Tro-201ENSMUST00000087253 Irx3P81067 507 aa13.73□□□□□ -0.21
Tro-201ENSMUST00000087253 Itsn1Q9Z0R4 1714 aa13.73□□□□□ -0.21
Tro-201ENSMUST00000087253 Prdm10Q3UTQ7 1184 aa13.73□□□□□ -0.21
Tro-201ENSMUST00000087253 Erich6D3Z6S9 713 aa13.73□□□□□ -0.21
Tro-201ENSMUST00000087253 AatkQ80YE4 1365 aa13.73□□□□□ -0.21
Tro-201ENSMUST00000087253 Ccdc9Q8VC31 543 aaKnown RBP13.72□□□□□ -0.21
Tro-201ENSMUST00000087253 Sbno1Q689Z5 1390 aa13.71□□□□□ -0.21
Tro-201ENSMUST00000087253 Cfap65Q3V0B4 1847 aa13.71□□□□□ -0.21
Tro-201ENSMUST00000087253 Sart3Q9JLI8 962 aaKnown RBP13.71□□□□□ -0.21
Tro-201ENSMUST00000087253 Neurod2Q62414 383 aa13.71□□□□□ -0.22
Tro-201ENSMUST00000087253 PrxO55103 1391 aa13.7□□□□□ -0.22
Tro-201ENSMUST00000087253 ArxO35085 564 aa13.7□□□□□ -0.22
Tro-201ENSMUST00000087253 Kdm2aP59997 1161 aa13.7□□□□□ -0.22
Tro-201ENSMUST00000087253 Adamtsl3G3UXC7 1706 aa13.7□□□□□ -0.22
Tro-201ENSMUST00000087253 Zscan10Q3URR7 782 aa13.69□□□□□ -0.22
Tro-201ENSMUST00000087253 Chmp5Q9D7S9 219 aa13.69□□□□□ -0.22
Tro-201ENSMUST00000087253 Kif13aQ9EQW7 1749 aa13.69□□□□□ -0.22
Tro-201ENSMUST00000087253 Kif3bQ61771 747 aa13.69□□□□□ -0.22
Tro-201ENSMUST00000087253 Slc4a1apE9PX68 744 aa13.68□□□□□ -0.22
Tro-201ENSMUST00000087253 Os9Q8K2C7 672 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 92.8 ms