RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Vgll3P85442 326 aa14.93□□□□□ -0.02
Trim61-201ENSMUST00000078409 Usp54Q8BL06 1588 aaKnown RBP14.9□□□□□ -0.02
Trim61-201ENSMUST00000078409 Cdk13Q69ZA1 1511 aaKnown RBP14.9□□□□□ -0.02
Trim61-201ENSMUST00000078409 Med1Q925J9 1575 aa14.89□□□□□ -0.03
Trim61-201ENSMUST00000078409 Robo2Q7TPD3 1470 aa14.89□□□□□ -0.03
Trim61-201ENSMUST00000078409 Prex1Q69ZK0 1650 aa14.88□□□□□ -0.03
Trim61-201ENSMUST00000078409 NeflP08551 543 aa14.88□□□□□ -0.03
Trim61-201ENSMUST00000078409 Kcnn1Q9EQR3 537 aa14.88□□□□□ -0.03
Trim61-201ENSMUST00000078409 Dnttip2Q8R2M2 758 aaKnown RBP14.87□□□□□ -0.03
Trim61-201ENSMUST00000078409 Arid4bA2CG63 1314 aaKnown RBP14.87□□□□□ -0.03
Trim61-201ENSMUST00000078409 NgefQ8CHT1 710 aa14.87□□□□□ -0.03
Trim61-201ENSMUST00000078409 Spag9Q58A65 1321 aaKnown RBP14.87□□□□□ -0.03
Trim61-201ENSMUST00000078409 Adgrb3Q80ZF8 1522 aa14.86□□□□□ -0.03
Trim61-201ENSMUST00000078409 Arid3aQ62431 601 aa14.85□□□□□ -0.03
Trim61-201ENSMUST00000078409 Adgrl2Q8JZZ7 1487 aa14.85□□□□□ -0.03
Trim61-201ENSMUST00000078409 Slit2Q9R1B9 1521 aa14.85□□□□□ -0.03
Trim61-201ENSMUST00000078409 Mtus2Q3UHD3 1353 aa14.85□□□□□ -0.03
Trim61-201ENSMUST00000078409 ShprhQ7TPQ3 1674 aa14.83□□□□□ -0.04
Trim61-201ENSMUST00000078409 Akap12Q9WTQ5 1684 aa14.83□□□□□ -0.04
Trim61-201ENSMUST00000078409 Setd1aE9PYH6 1716 aa14.83□□□□□ -0.04
Trim61-201ENSMUST00000078409 Abcc5Q9R1X5 1436 aa14.83□□□□□ -0.04
Trim61-201ENSMUST00000078409 Pik3c2aQ61194 1686 aa14.83□□□□□ -0.04
Trim61-201ENSMUST00000078409 Tom1O88746 492 aa14.82□□□□□ -0.04
Trim61-201ENSMUST00000078409 Vps8Q0P5W1 1427 aa14.82□□□□□ -0.04
Trim61-201ENSMUST00000078409 Kif21bQ9QXL1 1668 aa14.81□□□□□ -0.04
Trim61-201ENSMUST00000078409 Plekhh2Q8C115 1491 aa14.8□□□□□ -0.04
Trim61-201ENSMUST00000078409 DmtnQ9WV69 405 aa14.79□□□□□ -0.04
Trim61-201ENSMUST00000078409 Kif1bQ60575 1816 aaKnown RBP14.79□□□□□ -0.04
Trim61-201ENSMUST00000078409 Eif2ak4Q9QZ05 1648 aa14.79□□□□□ -0.04
Trim61-201ENSMUST00000078409 Brd2Q7JJ13 798 aaKnown RBP14.78□□□□□ -0.04
Trim61-201ENSMUST00000078409 Kif13aQ9EQW7 1749 aa14.78□□□□□ -0.04
Trim61-201ENSMUST00000078409 Lmtk3Q5XJV6 1424 aa14.78□□□□□ -0.04
Trim61-201ENSMUST00000078409 Thsd7aQ69ZU6 1645 aa14.78□□□□□ -0.04
Trim61-201ENSMUST00000078409 Ssh2Q5SW75 1423 aa14.78□□□□□ -0.04
Trim61-201ENSMUST00000078409 Mbd5B1AYB6 1498 aa14.77□□□□□ -0.04
Trim61-201ENSMUST00000078409 Fhad1A6PWD2 1420 aa14.77□□□□□ -0.05
Trim61-201ENSMUST00000078409 Amigo3Q8C2S7 508 aa14.76□□□□□ -0.05
Trim61-201ENSMUST00000078409 Itsn1Q9Z0R4 1714 aa14.76□□□□□ -0.05
Trim61-201ENSMUST00000078409 DekQ7TNV0 380 aaKnown RBP14.76□□□□□ -0.05
Trim61-201ENSMUST00000078409 Irx6Q9ER75 438 aa14.76□□□□□ -0.05
Trim61-201ENSMUST00000078409 Lamc1P02468 1607 aaKnown RBP14.76□□□□□ -0.05
Trim61-201ENSMUST00000078409 Nyap1Q6PFX7 833 aa14.75□□□□□ -0.05
Trim61-201ENSMUST00000078409 Pdcl3Q8BVF2 240 aa14.75□□□□□ -0.05
Trim61-201ENSMUST00000078409 Col18a1P39061 1774 aa14.75□□□□□ -0.05
Trim61-201ENSMUST00000078409 NinlQ6ZQ12 1394 aa14.75□□□□□ -0.05
Trim61-201ENSMUST00000078409 Anp32aO35381 247 aa14.74□□□□□ -0.05
Trim61-201ENSMUST00000078409 Zbtb7cQ8VCZ7 619 aa14.73□□□□□ -0.05
Trim61-201ENSMUST00000078409 Adgrl1Q80TR1 1466 aa14.72□□□□□ -0.05
Trim61-201ENSMUST00000078409 Rtn4Q99P72 1162 aaKnown RBP14.72□□□□□ -0.05
Trim61-201ENSMUST00000078409 3425401B19RikD3Z1D3 1412 aa14.72□□□□□ -0.05
Trim61-201ENSMUST00000078409 Cypt2Q6P924 180 aa14.71□□□□□ -0.05
Trim61-201ENSMUST00000078409 Brinp3Q499E0 766 aa14.71□□□□□ -0.06
Trim61-201ENSMUST00000078409 Arap3Q8R5G7 1538 aa14.7□□□□□ -0.06
Trim61-201ENSMUST00000078409 Gimap5Q8BWF2 308 aa14.7□□□□□ -0.06
Trim61-201ENSMUST00000078409 Myo3aQ8K3H5 1613 aa14.69□□□□□ -0.06
Trim61-201ENSMUST00000078409 BbxQ8VBW5 907 aa14.69□□□□□ -0.06
Trim61-201ENSMUST00000078409 Il16O54824 1322 aa14.69□□□□□ -0.06
Trim61-201ENSMUST00000078409 Tmem131lQ3U3D7 1597 aa14.69□□□□□ -0.06
Trim61-201ENSMUST00000078409 Txndc2Q6P902 515 aa14.69□□□□□ -0.06
Trim61-201ENSMUST00000078409 Fnbp4Q6ZQ03 1031 aa14.69□□□□□ -0.06
Trim61-201ENSMUST00000078409 Skint5A7XUY5 1461 aa14.68□□□□□ -0.06
Trim61-201ENSMUST00000078409 Rangap1P46061 589 aaKnown RBP14.67□□□□□ -0.06
Trim61-201ENSMUST00000078409 Cabp1Q9JLK7 227 aa14.67□□□□□ -0.06
Trim61-201ENSMUST00000078409 Hnrnpul2Q00PI9 745 aaKnown RBP14.67□□□□□ -0.06
Trim61-201ENSMUST00000078409 Pde4cQ3UEI1 686 aa14.67□□□□□ -0.06
Trim61-201ENSMUST00000078409 Taok2Q6ZQ29 1240 aa14.67□□□□□ -0.06
Trim61-201ENSMUST00000078409 Sall2Q9QX96 1004 aa14.67□□□□□ -0.06
Trim61-201ENSMUST00000078409 Sox12Q04890 314 aa14.66□□□□□ -0.06
Trim61-201ENSMUST00000078409 Ccdc27Q3V036 639 aa14.66□□□□□ -0.06
Trim61-201ENSMUST00000078409 Gtf2a1Q99PM3 378 aa14.66□□□□□ -0.06
Trim61-201ENSMUST00000078409 Naip7Q9JIB3 1402 aa14.66□□□□□ -0.06
Trim61-201ENSMUST00000078409 Kcna4Q61423 654 aa14.65□□□□□ -0.06
Trim61-201ENSMUST00000078409 Ino80Q6ZPV2 1559 aa14.65□□□□□ -0.06
Trim61-201ENSMUST00000078409 PtprvP70289 1705 aa14.65□□□□□ -0.06
Trim61-201ENSMUST00000078409 Nhsl1Q8CAF4 1587 aa14.65□□□□□ -0.06
Trim61-201ENSMUST00000078409 Slc5a4bQ91ZP4 660 aa14.65□□□□□ -0.06
Trim61-201ENSMUST00000078409 4933402E13RikQ9D4D2 429 aa14.65□□□□□ -0.06
Trim61-201ENSMUST00000078409 Ehbp1l1Q99MS7 1716 aa14.64□□□□□ -0.07
Trim61-201ENSMUST00000078409 Ankrd36D3Z4K0 1415 aa14.64□□□□□ -0.07
Trim61-201ENSMUST00000078409 Prdm2A2A7B5 1709 aaKnown RBP14.64□□□□□ -0.07
Trim61-201ENSMUST00000078409 PplQ9R269 1755 aa14.63□□□□□ -0.07
Trim61-201ENSMUST00000078409 PalldQ9ET54 1408 aa14.63□□□□□ -0.07
Trim61-201ENSMUST00000078409 Zranb1Q7M760 708 aa14.62□□□□□ -0.07
Trim61-201ENSMUST00000078409 AnkarA2RT91 1465 aa14.62□□□□□ -0.07
Trim61-201ENSMUST00000078409 Fam43aQ8BUP8 424 aa14.62□□□□□ -0.07
Trim61-201ENSMUST00000078409 Podxl2Q8CAE9 603 aa14.62□□□□□ -0.07
Trim61-201ENSMUST00000078409 Tnnt3Q9QZ47 272 aa14.62□□□□□ -0.07
Trim61-201ENSMUST00000078409 Ttc21bQ0HA38 1315 aa14.6□□□□□ -0.07
Trim61-201ENSMUST00000078409 Wdr66E9Q743 1299 aa14.6□□□□□ -0.07
Trim61-201ENSMUST00000078409 Nop58Q6DFW4 536 aaKnown RBP14.6□□□□□ -0.07
Trim61-201ENSMUST00000078409 Gm13695A2AK44 830 aa14.59□□□□□ -0.07
Trim61-201ENSMUST00000078409 Siglec1Q62230 1695 aa14.59□□□□□ -0.07
Trim61-201ENSMUST00000078409 Cntnap1O54991 1385 aa14.59□□□□□ -0.07
Trim61-201ENSMUST00000078409 Efcab6Q6P1E8 1516 aa14.58□□□□□ -0.07
Trim61-201ENSMUST00000078409 Tns3Q5SSZ5 1440 aa14.58□□□□□ -0.08
Trim61-201ENSMUST00000078409 Ttll13A4Q9F6 804 aa14.58□□□□□ -0.08
Trim61-201ENSMUST00000078409 Ylpm1Q9R0I7 1386 aaKnown RBP14.58□□□□□ -0.08
Trim61-201ENSMUST00000078409 Sema6bO54951 886 aa14.57□□□□□ -0.08
Trim61-201ENSMUST00000078409 Rrp9Q91WM3 475 aaKnown RBP14.57□□□□□ -0.08
Trim61-201ENSMUST00000078409 Uggt1Q6P5E4 1551 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms