RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Sema3fO88632 785 aa11.92□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Bsdc1Q80Y55 427 aa11.92□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Tulp1Q9Z273 543 aa11.92□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Brd1E9PZ26 1189 aaKnown RBP11.91□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Tex2Q6ZPJ0 1128 aaKnown RBP11.91□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Clec4gQ8BNX1 294 aa11.91□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Dph6Q9CQ28 267 aa11.91□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Armcx1Q9CX83 456 aa11.91□□□□□ -0.5
Upf3b-201ENSMUST00000076265 NrkQ9R0G8 1455 aa11.9□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Tmc2Q8R4P4 888 aa11.9□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Pbrm1Q8BSQ9 1634 aaKnown RBP11.89□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Gm17615E9Q9P2 165 aa11.89□□□□□ -0.51
Upf3b-201ENSMUST00000076265 TonslQ6NZL6 1363 aa11.89□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Top2aQ01320 1528 aaKnown RBP11.89□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Magi3Q9EQJ9 1476 aa11.88□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Tmtc2Q56A06 836 aa11.88□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Grin2aP35436 1464 aa11.88□□□□□ -0.51
Upf3b-201ENSMUST00000076265 PtprkP35822 1457 aa11.87□□□□□ -0.51
Upf3b-201ENSMUST00000076265 1700018F24RikB2RW27 314 aa11.87□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Ddx46Q569Z5 1032 aaKnown RBP11.87□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Zcchc11B2RX14 1644 aaKnown RBP11.87□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Tspan18Q80WR1 248 aa11.86□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Rrm1P07742 792 aa11.86□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Evc2Q8K1G2 1220 aa11.86□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Csrnp3P59055 597 aa11.85□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Zrsr2Q62377 462 aaKnown RBP11.85□□□□□ -0.51
Upf3b-201ENSMUST00000076265 AqrQ8CFQ3 1481 aaKnown RBP11.85□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Ccdc27Q3V036 639 aa11.85□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Fgd6Q69ZL1 1399 aa11.84□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Fkbp15Q6P9Q6 1216 aaKnown RBP11.84□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Mbl1P39039 239 aa11.83□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Gipc2Q9Z2H7 314 aa11.83□□□□□ -0.51
Upf3b-201ENSMUST00000076265 Armc3A2AU72 881 aa11.83□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Trim30cD3YVI9 513 aa11.83□□□□□ -0.52
Upf3b-201ENSMUST00000076265 U2surpQ6NV83 1029 aaKnown RBP11.83□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Shroom4Q1W617 1475 aa11.83□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Exoc5Q3TPX4 708 aa11.82□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Znf526Q8BI66 675 aa11.82□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Rps6kc1Q8BLK9 1056 aa11.82□□□□□ -0.52
Upf3b-201ENSMUST00000076265 GlmnQ8BZM1 596 aa11.81□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Commd10Q8JZY2 202 aa11.81□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Foxd1Q61345 456 aa11.81□□□□□ -0.52
Upf3b-201ENSMUST00000076265 ErfeQ6PGN1 340 aa11.81□□□□□ -0.52
Upf3b-201ENSMUST00000076265 NppbP40753 121 aa11.8□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Flt3Q00342 1000 aa11.8□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Pla2r1Q62028 1487 aa11.8□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Slc24a5Q8C261 501 aa11.8□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Gm20521D3Z5F7 333 aa11.79□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Ccar1Q8CH18 1146 aaKnown RBP11.79□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Fbln2P37889 1221 aa11.78□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Pnma2Q8BHK0 365 aa11.78□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Gm156Q58A37 223 aa11.78□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Ppp1r1bQ60829 194 aa11.78□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Nop58Q6DFW4 536 aaKnown RBP11.78□□□□□ -0.52
Upf3b-201ENSMUST00000076265 GopcQ8BH60 463 aa11.77□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Mrps9Q9D7N3 390 aaKnown RBP11.77□□□□□ -0.52
Upf3b-201ENSMUST00000076265 SynmQ70IV5 1561 aa11.77□□□□□ -0.52
Upf3b-201ENSMUST00000076265 Gapvd1Q6PAR5 1458 aa11.76□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Adgrl3Q80TS3 1537 aa11.76□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Gm21698A0A087WQP8 267 aa11.75□□□□□ -0.53
Upf3b-201ENSMUST00000076265 NeflP08551 543 aa11.75□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Rasgrp4Q8BTM9 673 aa11.75□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Apbb1ipQ8R5A3 670 aa11.75□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Srpk2O54781 681 aaKnown RBP11.75□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Rbm26Q6NZN0 1012 aaKnown RBP11.75□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Gpatch8A2A6A1 1505 aa11.74□□□□□ -0.53
Upf3b-201ENSMUST00000076265 AknaQ80VW7 1404 aa11.74□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Atl2Q6PA06 583 aa11.74□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Rmi1Q9D4G9 616 aa11.74□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Neurod6P48986 337 aa11.74□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Ppp4cP97470 307 aa11.74□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Chpf2Q3UU43 768 aa11.73□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Tbc1d12Q6A039 696 aa11.73□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Cadps2Q8BYR5 1297 aa11.73□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Tmem259Q8CIV2 574 aa11.73□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Ankrd49Q8VE42 238 aa11.73□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Gpr37l1Q99JG2 481 aa11.73□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Cep170Q6A065 1588 aa11.73□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Nrbp1Q99J45 535 aa11.72□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Ppfia1B2RXQ2 1266 aa11.72□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Scp2P32020 547 aaKnown RBP11.72□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Col4a3bpQ9EQG9 624 aa11.72□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Abcc1O35379 1528 aa11.72□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Gm21663A0A0G2JE01 267 aa11.71□□□□□ -0.53
Upf3b-201ENSMUST00000076265 5031410I06RikE9Q4E0 267 aa11.71□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Gm5862K7N5V5 267 aa11.71□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Gm10220K7N660 267 aa11.71□□□□□ -0.53
Upf3b-201ENSMUST00000076265 HalP35492 657 aa11.71□□□□□ -0.53
Upf3b-201ENSMUST00000076265 Pcdh10E9PXQ7 1057 aa11.71□□□□□ -0.54
Upf3b-201ENSMUST00000076265 MycnP03966 462 aaKnown RBP11.71□□□□□ -0.54
Upf3b-201ENSMUST00000076265 Ythdc2B2RR83 1445 aaKnown RBP11.71□□□□□ -0.54
Upf3b-201ENSMUST00000076265 Arhgap27A2AB59 869 aa11.7□□□□□ -0.54
Upf3b-201ENSMUST00000076265 SafbD3YXK2 937 aaKnown RBP11.7□□□□□ -0.54
Upf3b-201ENSMUST00000076265 Rasa4Q6PFQ7 802 aa11.7□□□□□ -0.54
Upf3b-201ENSMUST00000076265 Tor1aip2Q8BYU6 502 aa11.7□□□□□ -0.54
Upf3b-201ENSMUST00000076265 Cetn4Q8K4K1 168 aa11.7□□□□□ -0.54
Upf3b-201ENSMUST00000076265 Lman1Q9D0F3 517 aa11.7□□□□□ -0.54
Upf3b-201ENSMUST00000076265 Calr3Q9D9Q6 380 aa11.7□□□□□ -0.54
Upf3b-201ENSMUST00000076265 Mroh2bQ7M6Y6 1581 aa11.69□□□□□ -0.54
Upf3b-201ENSMUST00000076265 1700017N19RikA0A087WPJ1 469 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms