RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Myom2Q14BI5 1463 aa15.57■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Pola1P33609 1465 aa15.56■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Sipa1l1Q8C0T5 1782 aa15.56■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Zmym4A2A791 1549 aaKnown RBP15.56■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Erich6D3Z6S9 713 aa15.56■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Ppp1r18Q8BQ30 594 aa15.55■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Knl1Q66JQ7 1612 aa15.54■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Itsn2Q9Z0R6 1659 aa15.54■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Arid4bA2CG63 1314 aaKnown RBP15.54■□□□□ 0.08
Vamp1-202ENSMUST00000063588 AatkQ80YE4 1365 aa15.54■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Yeats2Q3TUF7 1407 aa15.54■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Plxnc1Q9QZC2 1574 aa15.54■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Rsph4aQ8BYM7 716 aa15.53■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Stard8Q8K031 1019 aa15.53■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Aplp2Q06335 707 aa15.52■□□□□ 0.08
Vamp1-202ENSMUST00000063588 Sall3Q62255 1320 aa15.51■□□□□ 0.07
Vamp1-202ENSMUST00000063588 Mroh1E0CZ22 1640 aa15.5■□□□□ 0.07
Vamp1-202ENSMUST00000063588 Myo3aQ8K3H5 1613 aa15.5■□□□□ 0.07
Vamp1-202ENSMUST00000063588 DnmbpQ6TXD4 1580 aa15.5■□□□□ 0.07
Vamp1-202ENSMUST00000063588 Sbno1Q689Z5 1390 aa15.5■□□□□ 0.07
Vamp1-202ENSMUST00000063588 Tnnt3Q9QZ47 272 aa15.5■□□□□ 0.07
Vamp1-202ENSMUST00000063588 Stk24Q99KH8 431 aa15.49■□□□□ 0.07
Vamp1-202ENSMUST00000063588 Srcin1Q9QWI6 1250 aa15.47■□□□□ 0.07
Vamp1-202ENSMUST00000063588 Nphp4P59240 1425 aa15.47■□□□□ 0.07
Vamp1-202ENSMUST00000063588 PnisrA2AJT4 805 aaKnown RBP15.46■□□□□ 0.07
Vamp1-202ENSMUST00000063588 Myom1Q62234 1667 aaKnown RBP15.46■□□□□ 0.07
Vamp1-202ENSMUST00000063588 Ift172Q6VH22 1749 aa15.46■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Znf710Q3U288 666 aa15.45■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Gm20521D3Z5F7 333 aa15.44■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Mrs2Q5NCE8 434 aa15.44■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Qser1A2BIE1 1698 aa15.44■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Ttbk1Q6PCN3 1308 aa15.44■□□□□ 0.06
Vamp1-202ENSMUST00000063588 RictorQ6QI06 1708 aa15.44■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Srpk2O54781 681 aaKnown RBP15.43■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Kdm2aP59997 1161 aa15.43■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Exoc6Q8R313 802 aa15.43■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Skint5A7XUY5 1461 aa15.43■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Ahdc1Q6PAL7 1594 aaKnown RBP15.43■□□□□ 0.06
Vamp1-202ENSMUST00000063588 NpatQ8BMA5 1420 aa15.43■□□□□ 0.06
Vamp1-202ENSMUST00000063588 CltcQ68FD5 1675 aaKnown RBP15.42■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Hfm1D3Z4R1 1434 aa15.42■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Wwc2Q6NXJ0 1187 aa15.42■□□□□ 0.06
Vamp1-202ENSMUST00000063588 NrdcQ8BHG1 1161 aa15.41■□□□□ 0.06
Vamp1-202ENSMUST00000063588 PrxO55103 1391 aa15.4■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Slc4a2P13808 1237 aaKnown RBP15.4■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Gtf2e1Q9D0D5 440 aa15.4■□□□□ 0.06
Vamp1-202ENSMUST00000063588 Kdm5aQ3UXZ9 1690 aa15.39■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Arhgap23Q69ZH9 1483 aa15.39■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Os9Q8K2C7 672 aa15.39■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Slc52a2Q9D8F3 450 aa15.39■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Kif13aQ9EQW7 1749 aa15.38■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Anp32bQ9EST5 272 aaKnown RBP15.38■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Tmf1B9EKI3 1091 aa15.37■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Usp40Q8BWR4 1235 aa15.36■□□□□ 0.05
Vamp1-202ENSMUST00000063588 AU022751B1B0V2 589 aa15.35■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Puf60Q3UEB3 564 aaKnown RBP15.35■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Fan1Q69ZT1 1020 aa15.35■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Pank3Q8R2W9 370 aa15.35■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Slc24a1Q91WD8 1130 aa15.35■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Itsn1Q9Z0R4 1714 aa15.35■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Gm16486A0A1D5RMD1 1434 aa15.35■□□□□ 0.05
Vamp1-202ENSMUST00000063588 PalldQ9ET54 1408 aa15.35■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Zc3h13E9Q784 1729 aaKnown RBP15.34■□□□□ 0.05
Vamp1-202ENSMUST00000063588 MaddQ80U28 1577 aa15.34■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Lrrc7Q80TE7 1490 aa15.34■□□□□ 0.05
Vamp1-202ENSMUST00000063588 Zscan10Q3URR7 782 aa15.33■□□□□ 0.04
Vamp1-202ENSMUST00000063588 1700123L14RikQ3V2K7 440 aa15.33■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Prrc2bQ7TPM1 1486 aaKnown RBP15.32■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Fam184bQ0KK56 942 aa15.32■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Arhgef28P97433 1693 aa15.31■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Zbtb4Q5F293 982 aa15.31■□□□□ 0.04
Vamp1-202ENSMUST00000063588 PtprmP28828 1452 aa15.31■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Eif2ak4Q9QZ05 1648 aa15.3■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Adamtsl3G3UXC7 1706 aa15.3■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Afap1Q80YS6 731 aa15.3■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Inpp5dQ9ES52 1191 aa15.3■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Tex14Q7M6U3 1450 aa15.28■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Slc4a1apE9PX68 744 aa15.28■□□□□ 0.04
Vamp1-202ENSMUST00000063588 PplQ9R269 1755 aa15.28■□□□□ 0.04
Vamp1-202ENSMUST00000063588 IqubQ8CDK3 788 aa15.27■□□□□ 0.04
Vamp1-202ENSMUST00000063588 Med14A2ABV5 1459 aaKnown RBP15.27■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Naip7Q9JIB3 1402 aa15.27■□□□□ 0.03
Vamp1-202ENSMUST00000063588 InsrP15208 1372 aa15.27■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Pcdh10E9PXQ7 1057 aa15.25■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Csrnp3P59055 597 aa15.25■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Chd2E9PZM4 1827 aaKnown RBP15.25■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Zscan21Q07231 555 aa15.24■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Rpgrip1lQ8CG73 1264 aa15.24■□□□□ 0.03
Vamp1-202ENSMUST00000063588 CenpjQ569L8 1344 aa15.23■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Gprasp1Q5U4C1 1347 aa15.23■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Stag3O70576 1240 aa15.23■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Rab3gap2Q8BMG7 1366 aa15.22■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Plekhg1F6S200 1446 aa15.21■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Gemin5Q8BX17 1502 aaKnown RBP15.21■□□□□ 0.03
Vamp1-202ENSMUST00000063588 Ercc6l2Q9JIM3 1537 aa15.2■□□□□ 0.02
Vamp1-202ENSMUST00000063588 KdrP35918 1367 aa15.2■□□□□ 0.02
Vamp1-202ENSMUST00000063588 Atf7ipQ7TT18 1306 aa15.2■□□□□ 0.02
Vamp1-202ENSMUST00000063588 Dip2aQ8BWT5 1523 aa15.19■□□□□ 0.02
Vamp1-202ENSMUST00000063588 Ppp2r1aQ76MZ3 589 aa15.18■□□□□ 0.02
Vamp1-202ENSMUST00000063588 Shq1Q7TMX5 569 aa15.17■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms