RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Iffo2Q8R2V2 512 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Ylpm1Q9R0I7 1386 aaKnown RBP6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 WrnO09053 1401 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Cspp1B2RX88 1205 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Filip1lQ6P6L0 1131 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Sf3a1Q8K4Z5 791 aaKnown RBP6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 CrebrfQ8CDG5 640 aaKnown RBP6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Usp16Q99LG0 825 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Mcm4P49717 862 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 RdxP26043 583 aaKnown RBP6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Trim30aP15533 496 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 IbspQ61711 324 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 PogkQ80TC5 607 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Psme1P97371 249 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Plekhh1Q80TI1 1356 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Fez1Q8K0X8 392 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Q9D2X8 372 aa6.37□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Nkx1-2P42580 305 aa6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Fbxo2Q80UW2 297 aa6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Tmc1Q8R4P5 757 aa6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Rbm10Q99KG3 930 aaKnown RBP6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Rnf214Q8BFU3 668 aaKnown RBP6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Kank1E9Q238 1360 aa6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Phactr2B1AVP0 632 aa6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Brpf1B2RRD7 1212 aa6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Rassf8Q8CJ96 419 aa6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Map4k4P97820 1233 aaKnown RBP6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Stk11ipQ3TAA7 1072 aa6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Sh3bp5Q9Z131 463 aa6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Kiaa0754Q69ZZ9 979 aa6.36□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Gnai1B2RSH2 354 aa6.35□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Znf692Q3U381 531 aa6.35□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Gnai3Q9DC51 354 aa6.35□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Atad2bE9Q166 1460 aaKnown RBP6.35□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Gsto1O09131 240 aa6.35□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Cyp46a1Q9WVK8 500 aa6.35□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Cc2d2bA0A286YDU8 1405 aa6.35□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Stk31Q99MW1 1018 aa6.35□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Rsph4aQ8BYM7 716 aa6.35□□□□□ -1.39
Ush2a-201ENSMUST00000060479 KinQ8K339 391 aa6.35□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Plekhh2Q8C115 1491 aa6.34□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Cavin4A2AMM0 362 aa6.34□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Ppip5k2Q6ZQB6 1129 aa6.34□□□□□ -1.39
Ush2a-201ENSMUST00000060479 PtprkP35822 1457 aa6.34□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Ccdc173A0JLY1 547 aa6.34□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Clstn1Q9EPL2 979 aa6.34□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Cc2d1aQ8K1A6 943 aa6.34□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Uspl1Q3ULM6 1089 aa6.34□□□□□ -1.4
Ush2a-201ENSMUST00000060479 PrxO55103 1391 aa6.34□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Calcoco2A2A6M5 331 aa6.34□□□□□ -1.4
Ush2a-201ENSMUST00000060479 R3hcc1Q8BSI6 488 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Terf2O35144 541 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Slc4a10Q5DTL9 1118 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Arap1Q4LDD4 1452 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Shq1Q7TMX5 569 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Ercc6F8VPZ5 1481 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Hmox1P14901 289 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Naip2Q9QUK4 1447 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Zkscan1Q8BGS3 561 aaKnown RBP6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Fchsd2Q3USJ8 740 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Kif4P33174 1231 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Txndc2Q6P902 515 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Podxl2Q8CAE9 603 aa6.33□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Polr3gQ6NXY9 223 aa6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Mink1Q9JM52 1308 aa6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Pdia4P08003 638 aaKnown RBP6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Maco1Q7TQE6 664 aaKnown RBP6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Utp3Q9JI13 469 aaKnown RBP6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Ncoa1P70365 1447 aa6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Ccdc171E9Q1U1 1324 aa6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Nol12Q8BG17 217 aa6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Rab11fip3Q8CHD8 1047 aa6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Chmp4cQ9D7F7 232 aa6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Wwc1Q5SXA9 1104 aa6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Gcc1Q9D4H2 778 aa6.32□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Fam13bQ8K2H3 851 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Tbc1d32Q3URV1 1296 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 TimelessQ9R1X4 1197 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 CadpsQ80TJ1 1355 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Hs1bp3Q3TC93 395 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 ImpactO55091 318 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Nap1l3Q794H2 544 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Babam1Q3UI43 333 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Atxn3Q9CVD2 355 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Smc3Q9CW03 1217 aaKnown RBP6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 CarsQ9ER72 831 aaKnown RBP6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 AknaQ80VW7 1404 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Duxf3A0A0N4SV92 674 aa6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 EzrP26040 586 aaKnown RBP6.31□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Tpd52l1O54818 204 aa6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 SetQ9EQU5 289 aaKnown RBP6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Kif3aP28741 701 aa6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Sox12Q04890 314 aa6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Cabp4Q8VHC5 271 aa6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Ccer1Q9CQL2 403 aa6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Plekhm2Q80TQ5 1018 aa6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Dixdc1Q80Y83 711 aa6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Sv2bQ8BG39 683 aa6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 AnlnQ8K298 1121 aaKnown RBP6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Ddx11Q6AXC6 880 aa6.3□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms