RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Baz1bQ9Z277 1479 aa12.5□□□□□ -0.41
Col6a3-201ENSMUST00000056925 NcapgE9PWG6 1004 aa12.5□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Kiaa1211Q5PR69 1207 aa12.5□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Ubxn4Q8VCH8 506 aa12.5□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Rock2P70336 1388 aa12.5□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Kcnj4P52189 445 aa12.49□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Sin3aQ60520 1274 aaKnown RBP12.49□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Ccdc181Q80ZU5 509 aa12.49□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Stk24Q99KH8 431 aa12.49□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Trim30cD3YVI9 513 aa12.49□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Kri1Q8VDQ9 704 aaKnown RBP12.49□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Otud6bQ8K2H2 294 aa12.49□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Pkd2O35245 966 aa12.49□□□□□ -0.41
Col6a3-201ENSMUST00000056925 PdcQ9QW08 244 aa12.49□□□□□ -0.41
Col6a3-201ENSMUST00000056925 AampJ3QN89 436 aa12.48□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Paip2Q9D6V8 124 aa12.48□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Dhx8A2A4P0 1244 aaKnown RBP12.48□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Trap1aP19473 224 aa12.48□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Plcd3Q8K2J0 785 aa12.48□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Plin1Q8CGN5 517 aa12.48□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Krt82Q99M74 516 aa12.48□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Baz1aO88379 1555 aa12.48□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Frmd3Q8BHD4 595 aa12.47□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Sept6Q9R1T4 434 aa12.47□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Map9Q3TRR0 646 aa12.47□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Vps53Q8CCB4 832 aa12.47□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Evc2Q8K1G2 1220 aa12.47□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Rrp7aQ9D1C9 280 aaKnown RBP12.47□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Ccdc102aQ3TMW1 549 aa12.46□□□□□ -0.41
Col6a3-201ENSMUST00000056925 ClasrpQ8CFC7 668 aa12.46□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Rsf1E9PWW9 1441 aaKnown RBP12.46□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Chmp3Q9CQ10 224 aa12.46□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Rnf187Q8BFX1 236 aa12.46□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Ift57Q8BXG3 429 aa12.46□□□□□ -0.42
Col6a3-201ENSMUST00000056925 ItpripQ3TNL8 555 aa12.45□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Nap1l1P28656 391 aaKnown RBP12.45□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Rock1P70335 1354 aa12.45□□□□□ -0.42
Col6a3-201ENSMUST00000056925 MicalclQ9D5U9 680 aa12.45□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Fez2Q6TYB5 348 aa12.44□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Erlin2Q8BFZ9 340 aa12.44□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Hnrnpul1Q8VDM6 859 aaKnown RBP12.44□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Cplx1P63040 134 aa12.43□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Ifit1bl1D3Z6F0 470 aa12.43□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Bag1Q60739 355 aa12.43□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Ccdc39Q9D5Y1 937 aa12.43□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Odf2A3KGV1 830 aaKnown RBP12.43□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Gtf2e1Q9D0D5 440 aa12.43□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Nf2P46662 596 aa12.43□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Necab1Q8BG18 352 aa12.42□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Wdr78E9PYY5 807 aa12.42□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Ppfibp2O35711 882 aa12.42□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Spata24Q6P926 205 aa12.42□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Smc3Q9CW03 1217 aaKnown RBP12.42□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Ncbp3Q8BZR9 615 aaKnown RBP12.42□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Ccdc183A2AJB1 534 aa12.42□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Tmx4Q8C0L0 335 aa12.42□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Dcaf11Q91VU6 549 aa12.42□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Ccdc43Q9CR29 222 aaKnown RBP12.41□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Phactr2B1AVP0 632 aa12.41□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Erich4Q3UNU4 136 aa12.41□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Olfml1Q8BSH2 233 aa12.41□□□□□ -0.42
Col6a3-201ENSMUST00000056925 NmiO35309 314 aa12.41□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Pak3Q61036 559 aa12.41□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Slc4a10Q5DTL9 1118 aa12.4□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Jakmip2D3YXK0 820 aa12.4□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Mad1l1Q9WTX8 717 aaKnown RBP12.4□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Acbd3Q8BMP6 525 aa12.4□□□□□ -0.42
Col6a3-201ENSMUST00000056925 IncenpQ9WU62 880 aa12.4□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Cplx2P84086 134 aa12.4□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Scaf1Q5U4C3 1256 aaKnown RBP12.4□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Gse1Q3U3C9 1213 aa12.4□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Gprasp1Q5U4C1 1347 aa12.4□□□□□ -0.42
Col6a3-201ENSMUST00000056925 Mnat1P51949 309 aa12.39□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Plagl1Q9JLQ4 704 aa12.39□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Ctr9Q62018 1173 aaKnown RBP12.39□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Prkrip1Q9CWV6 186 aaKnown RBP12.39□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Fbxo3Q9DC63 480 aa12.39□□□□□ -0.43
Col6a3-201ENSMUST00000056925 PogkQ80TC5 607 aa12.39□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Ubl4bQ9CQ84 188 aa12.39□□□□□ -0.43
Col6a3-201ENSMUST00000056925 NefhP19246 1090 aa12.38□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Ddx11Q6AXC6 880 aa12.38□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Chmp4cQ9D7F7 232 aa12.38□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Smc2Q8CG48 1191 aaKnown RBP12.38□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Kiaa0753Q6A000 959 aa12.38□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Exoc8Q6PGF7 716 aa12.38□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Brd2Q7JJ13 798 aaKnown RBP12.38□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Phldb2Q8K1N2 1249 aa12.38□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Trerf1Q8BXJ2 1205 aa12.38□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Senp3Q9EP97 568 aaKnown RBP12.38□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Nat10Q8K224 1024 aaKnown RBP12.37□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Dnajc2P54103 621 aaKnown RBP12.37□□□□□ -0.43
Col6a3-201ENSMUST00000056925 1700010I14RikQ7TPG0 532 aa12.37□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Ccdc60Q8C4J0 545 aa12.37□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Fmnl2A2APV2 1086 aa12.37□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Hdgfl1Q2VPR5 283 aa12.37□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Cfap58B2RW38 873 aa12.37□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Pibf1E9Q6K3 756 aa12.37□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Tceal9Q9DD24 104 aa12.37□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Ankrd24Q80VM7 985 aa12.36□□□□□ -0.43
Col6a3-201ENSMUST00000056925 SelenooQ9DBC0 667 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms