RNA–Protein interactions for RNA: ENSMUST00000055006.11

Trim16-201, Transcript of Tripartite motif-containing protein 16, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim16, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16-201ENSMUST00000055006 Mlh3A0A1Y7VMP7 1443 aa10.01□□□□□ -0.81
Trim16-201ENSMUST00000055006 Sall3Q62255 1320 aa10.01□□□□□ -0.81
Trim16-201ENSMUST00000055006 Abca16E9PWJ7 1678 aa10.01□□□□□ -0.81
Trim16-201ENSMUST00000055006 Srpk2O54781 681 aaKnown RBP10.01□□□□□ -0.81
Trim16-201ENSMUST00000055006 Fan1Q69ZT1 1020 aa10.01□□□□□ -0.81
Trim16-201ENSMUST00000055006 Cluap1Q8R3P7 413 aa10.01□□□□□ -0.81
Trim16-201ENSMUST00000055006 KarsQ99MN1 595 aaKnown RBP10.01□□□□□ -0.81
Trim16-201ENSMUST00000055006 Gtf2e1Q9D0D5 440 aa10.01□□□□□ -0.81
Trim16-201ENSMUST00000055006 Kiaa1551Q5DTW7 1521 aa10□□□□□ -0.81
Trim16-201ENSMUST00000055006 Gas2l2Q5SSG4 860 aa10□□□□□ -0.81
Trim16-201ENSMUST00000055006 Htatsf1Q8BGC0 757 aa10□□□□□ -0.81
Trim16-201ENSMUST00000055006 Map3k5O35099 1380 aa10□□□□□ -0.81
Trim16-201ENSMUST00000055006 Ipo4Q8VI75 1082 aa10□□□□□ -0.81
Trim16-201ENSMUST00000055006 Fgd1P52734 960 aa9.99□□□□□ -0.81
Trim16-201ENSMUST00000055006 Dot1lQ6XZL8 1540 aa9.99□□□□□ -0.81
Trim16-201ENSMUST00000055006 Kdm5cP41230 1554 aa9.99□□□□□ -0.81
Trim16-201ENSMUST00000055006 Trappc8E9PWG2 1437 aa9.98□□□□□ -0.81
Trim16-201ENSMUST00000055006 PtprgQ05909 1442 aa9.98□□□□□ -0.81
Trim16-201ENSMUST00000055006 Dnttip2Q8R2M2 758 aaKnown RBP9.98□□□□□ -0.81
Trim16-201ENSMUST00000055006 Arhgap5P97393 1501 aa9.98□□□□□ -0.81
Trim16-201ENSMUST00000055006 Atxn3Q9CVD2 355 aa9.98□□□□□ -0.81
Trim16-201ENSMUST00000055006 Caskin1Q6P9K8 1431 aa9.98□□□□□ -0.81
Trim16-201ENSMUST00000055006 Usp40Q8BWR4 1235 aa9.97□□□□□ -0.81
Trim16-201ENSMUST00000055006 Mapkbp1Q6NS57 1503 aa9.97□□□□□ -0.81
Trim16-201ENSMUST00000055006 Ksr2Q3UVC0 959 aa9.97□□□□□ -0.81
Trim16-201ENSMUST00000055006 Tex14Q7M6U3 1450 aa9.96□□□□□ -0.81
Trim16-201ENSMUST00000055006 Neo1P97798 1493 aa9.96□□□□□ -0.82
Trim16-201ENSMUST00000055006 Trpm2Q91YD4 1506 aa9.96□□□□□ -0.82
Trim16-201ENSMUST00000055006 Mfap1aC0HKD8 439 aaKnown RBP9.96□□□□□ -0.82
Trim16-201ENSMUST00000055006 Mfap1bC0HKD9 439 aaKnown RBP9.96□□□□□ -0.82
Trim16-201ENSMUST00000055006 Nup160Q9Z0W3 1402 aaKnown RBP9.95□□□□□ -0.82
Trim16-201ENSMUST00000055006 Kif3bQ61771 747 aa9.95□□□□□ -0.82
Trim16-201ENSMUST00000055006 Ralbp1Q62172 648 aa9.95□□□□□ -0.82
Trim16-201ENSMUST00000055006 Tnpo1Q8BFY9 898 aaKnown RBP9.95□□□□□ -0.82
Trim16-201ENSMUST00000055006 Trim58Q5NCC9 485 aa9.95□□□□□ -0.82
Trim16-201ENSMUST00000055006 Ppp1r9bQ6R891 817 aaKnown RBP9.95□□□□□ -0.82
Trim16-201ENSMUST00000055006 Znf330Q922H9 316 aa9.95□□□□□ -0.82
Trim16-201ENSMUST00000055006 Lrrc9Q8CDN9 1456 aa9.95□□□□□ -0.82
Trim16-201ENSMUST00000055006 AU015836B2RUM3 263 aa9.94□□□□□ -0.82
Trim16-201ENSMUST00000055006 Tarbp1E9Q368 1579 aa9.94□□□□□ -0.82
Trim16-201ENSMUST00000055006 U2af1Q9D883 239 aaKnown RBP9.94□□□□□ -0.82
Trim16-201ENSMUST00000055006 Vsig10D3YX43 558 aa9.93□□□□□ -0.82
Trim16-201ENSMUST00000055006 Apaf1O88879 1249 aa9.93□□□□□ -0.82
Trim16-201ENSMUST00000055006 Abcc2Q8VI47 1543 aa9.93□□□□□ -0.82
Trim16-201ENSMUST00000055006 Setd1bQ8CFT2 1985 aa9.93□□□□□ -0.82
Trim16-201ENSMUST00000055006 Mroh2aD3Z750 1679 aa9.93□□□□□ -0.82
Trim16-201ENSMUST00000055006 Plch2A2AP18 1501 aa9.93□□□□□ -0.82
Trim16-201ENSMUST00000055006 Plcb2A3KGF7 1181 aa9.93□□□□□ -0.82
Trim16-201ENSMUST00000055006 Rlbp1Q9Z275 317 aa9.93□□□□□ -0.82
Trim16-201ENSMUST00000055006 Stag3O70576 1240 aa9.92□□□□□ -0.82
Trim16-201ENSMUST00000055006 Duxf3A0A0N4SV92 674 aa9.92□□□□□ -0.82
Trim16-201ENSMUST00000055006 Znf692Q3U381 531 aa9.92□□□□□ -0.82
Trim16-201ENSMUST00000055006 Gm16486A0A1D5RMD1 1434 aa9.92□□□□□ -0.82
Trim16-201ENSMUST00000055006 GsdmaQ9EST1 446 aa9.91□□□□□ -0.82
Trim16-201ENSMUST00000055006 Iqgap1Q9JKF1 1657 aaKnown RBP9.91□□□□□ -0.82
Trim16-201ENSMUST00000055006 Gapvd1Q6PAR5 1458 aa9.91□□□□□ -0.82
Trim16-201ENSMUST00000055006 Atp1b4Q99ME6 356 aa9.91□□□□□ -0.82
Trim16-201ENSMUST00000055006 Senp3Q9EP97 568 aaKnown RBP9.91□□□□□ -0.82
Trim16-201ENSMUST00000055006 Ppp2r3aB2RXC8 1150 aa9.91□□□□□ -0.82
Trim16-201ENSMUST00000055006 DekQ7TNV0 380 aaKnown RBP9.91□□□□□ -0.82
Trim16-201ENSMUST00000055006 Pknox2Q8BG99 474 aa9.91□□□□□ -0.82
Trim16-201ENSMUST00000055006 Fmn2Q9JL04 1578 aa9.91□□□□□ -0.82
Trim16-201ENSMUST00000055006 Ttc41Q692V3 1318 aa9.9□□□□□ -0.82
Trim16-201ENSMUST00000055006 Atf7ipQ7TT18 1306 aa9.9□□□□□ -0.82
Trim16-201ENSMUST00000055006 Sptbn5F6UCX4 1208 aa9.9□□□□□ -0.82
Trim16-201ENSMUST00000055006 Uspl1Q3ULM6 1089 aa9.9□□□□□ -0.82
Trim16-201ENSMUST00000055006 Eif4g3Q80XI3 1579 aaKnown RBP9.9□□□□□ -0.82
Trim16-201ENSMUST00000055006 Usp19Q3UJD6 1360 aa9.9□□□□□ -0.82
Trim16-201ENSMUST00000055006 Adgrl2Q8JZZ7 1487 aa9.9□□□□□ -0.83
Trim16-201ENSMUST00000055006 Pnmal2G3X9N3 661 aa9.89□□□□□ -0.83
Trim16-201ENSMUST00000055006 Ylpm1Q9R0I7 1386 aaKnown RBP9.89□□□□□ -0.83
Trim16-201ENSMUST00000055006 Fancd2Q80V62 1450 aa9.89□□□□□ -0.83
Trim16-201ENSMUST00000055006 Sbno1Q689Z5 1390 aa9.89□□□□□ -0.83
Trim16-201ENSMUST00000055006 Nsd2Q8BVE8 1365 aa9.89□□□□□ -0.83
Trim16-201ENSMUST00000055006 Rabep1O35551 862 aa9.88□□□□□ -0.83
Trim16-201ENSMUST00000055006 Tsen2Q6P7W5 460 aa9.88□□□□□ -0.83
Trim16-201ENSMUST00000055006 Prdm16A2A935 1275 aa9.88□□□□□ -0.83
Trim16-201ENSMUST00000055006 Edc4Q3UJB9 1406 aaKnown RBP9.87□□□□□ -0.83
Trim16-201ENSMUST00000055006 Setd1aE9PYH6 1716 aa9.87□□□□□ -0.83
Trim16-201ENSMUST00000055006 Rfx1P48377 963 aa9.87□□□□□ -0.83
Trim16-201ENSMUST00000055006 Ccar1Q8CH18 1146 aaKnown RBP9.87□□□□□ -0.83
Trim16-201ENSMUST00000055006 Exosc9Q9JHI7 438 aaKnown RBP9.87□□□□□ -0.83
Trim16-201ENSMUST00000055006 Nutm1Q8BHP2 1126 aa9.86□□□□□ -0.83
Trim16-201ENSMUST00000055006 Pdcl3Q8BVF2 240 aa9.86□□□□□ -0.83
Trim16-201ENSMUST00000055006 Ppp1r3fQ9JIG4 799 aa9.86□□□□□ -0.83
Trim16-201ENSMUST00000055006 Arid3cA6PWV5 409 aa9.86□□□□□ -0.83
Trim16-201ENSMUST00000055006 Puf60Q3UEB3 564 aaKnown RBP9.86□□□□□ -0.83
Trim16-201ENSMUST00000055006 Tmco5bQ80X59 307 aa9.86□□□□□ -0.83
Trim16-201ENSMUST00000055006 Stk26Q99JT2 416 aa9.86□□□□□ -0.83
Trim16-201ENSMUST00000055006 ErbinQ80TH2 1402 aa9.85□□□□□ -0.83
Trim16-201ENSMUST00000055006 Adamts13Q769J6 1426 aa9.85□□□□□ -0.83
Trim16-201ENSMUST00000055006 Kiaa1107Q80TK0 1369 aa9.85□□□□□ -0.83
Trim16-201ENSMUST00000055006 GorabQ8BRM2 368 aa9.85□□□□□ -0.83
Trim16-201ENSMUST00000055006 Lrriq1Q0P5X1 1673 aa9.84□□□□□ -0.83
Trim16-201ENSMUST00000055006 AI481877A2ALV5 1481 aa9.84□□□□□ -0.83
Trim16-201ENSMUST00000055006 Fam208aQ69ZR9 1610 aaKnown RBP9.84□□□□□ -0.83
Trim16-201ENSMUST00000055006 Map7O88735 730 aa9.84□□□□□ -0.83
Trim16-201ENSMUST00000055006 Ccdc60Q8C4J0 545 aa9.84□□□□□ -0.83
Trim16-201ENSMUST00000055006 IqubQ8CDK3 788 aa9.84□□□□□ -0.83
Trim16-201ENSMUST00000055006 SlkO54988 1233 aa9.84□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms