RNA–Protein interactions for RNA: ENSMUST00000048065.5

Trem3-201, Transcript of TREM-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trem3, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3-201ENSMUST00000048065 Prdm2A2A7B5 1709 aaKnown RBP18.79■□□□□ 0.6
Trem3-201ENSMUST00000048065 ErbinQ80TH2 1402 aa18.78■□□□□ 0.6
Trem3-201ENSMUST00000048065 Dhx9O70133 1380 aaKnown RBP18.78■□□□□ 0.6
Trem3-201ENSMUST00000048065 Tarbp1E9Q368 1579 aa18.77■□□□□ 0.6
Trem3-201ENSMUST00000048065 Atp1b4Q99ME6 356 aa18.77■□□□□ 0.6
Trem3-201ENSMUST00000048065 Eif2ak4Q9QZ05 1648 aa18.77■□□□□ 0.6
Trem3-201ENSMUST00000048065 Tubgcp6G5E8P0 1769 aa18.76■□□□□ 0.59
Trem3-201ENSMUST00000048065 Edc4Q3UJB9 1406 aaKnown RBP18.75■□□□□ 0.59
Trem3-201ENSMUST00000048065 Med1Q925J9 1575 aa18.75■□□□□ 0.59
Trem3-201ENSMUST00000048065 Myo3aQ8K3H5 1613 aa18.74■□□□□ 0.59
Trem3-201ENSMUST00000048065 Amigo3Q8C2S7 508 aa18.74■□□□□ 0.59
Trem3-201ENSMUST00000048065 Gemin5Q8BX17 1502 aaKnown RBP18.74■□□□□ 0.59
Trem3-201ENSMUST00000048065 AatkQ80YE4 1365 aa18.73■□□□□ 0.59
Trem3-201ENSMUST00000048065 Uggt1Q6P5E4 1551 aa18.72■□□□□ 0.59
Trem3-201ENSMUST00000048065 Zc3h13E9Q784 1729 aaKnown RBP18.71■□□□□ 0.59
Trem3-201ENSMUST00000048065 Iqsec2Q5DU25 1478 aa18.71■□□□□ 0.59
Trem3-201ENSMUST00000048065 Pik3c2gO70167 1506 aa18.71■□□□□ 0.59
Trem3-201ENSMUST00000048065 Mroh1E0CZ22 1640 aa18.71■□□□□ 0.58
Trem3-201ENSMUST00000048065 Lmtk3Q5XJV6 1424 aa18.69■□□□□ 0.58
Trem3-201ENSMUST00000048065 AU022751B1B0V2 589 aa18.68■□□□□ 0.58
Trem3-201ENSMUST00000048065 Pkd2O35245 966 aa18.68■□□□□ 0.58
Trem3-201ENSMUST00000048065 Hdac5Q9Z2V6 1113 aa18.68■□□□□ 0.58
Trem3-201ENSMUST00000048065 PalldQ9ET54 1408 aa18.67■□□□□ 0.58
Trem3-201ENSMUST00000048065 Abca8aQ8K442 1620 aa18.67■□□□□ 0.58
Trem3-201ENSMUST00000048065 PplQ9R269 1755 aa18.66■□□□□ 0.58
Trem3-201ENSMUST00000048065 Q9D9H8 365 aa18.66■□□□□ 0.58
Trem3-201ENSMUST00000048065 Setd1aE9PYH6 1716 aa18.66■□□□□ 0.58
Trem3-201ENSMUST00000048065 Evi5lH3BKQ3 813 aa18.65■□□□□ 0.58
Trem3-201ENSMUST00000048065 Ehbp1l1Q99MS7 1716 aa18.64■□□□□ 0.57
Trem3-201ENSMUST00000048065 Thsd7aQ69ZU6 1645 aa18.63■□□□□ 0.57
Trem3-201ENSMUST00000048065 Shq1Q7TMX5 569 aa18.63■□□□□ 0.57
Trem3-201ENSMUST00000048065 Mroh3A0A1D5RM54 893 aa18.61■□□□□ 0.57
Trem3-201ENSMUST00000048065 Slit3Q9WVB4 1523 aa18.6■□□□□ 0.57
Trem3-201ENSMUST00000048065 Brinp3Q499E0 766 aa18.6■□□□□ 0.57
Trem3-201ENSMUST00000048065 Arhgef28P97433 1693 aa18.6■□□□□ 0.57
Trem3-201ENSMUST00000048065 Slain2Q8CI08 581 aa18.59■□□□□ 0.57
Trem3-201ENSMUST00000048065 Kif21bQ9QXL1 1668 aa18.59■□□□□ 0.57
Trem3-201ENSMUST00000048065 Tns3Q5SSZ5 1440 aa18.58■□□□□ 0.57
Trem3-201ENSMUST00000048065 Mbd5B1AYB6 1498 aa18.58■□□□□ 0.56
Trem3-201ENSMUST00000048065 Ankrd36D3Z4K0 1415 aa18.57■□□□□ 0.56
Trem3-201ENSMUST00000048065 HnrnpmQ9D0E1 729 aaKnown RBP18.56■□□□□ 0.56
Trem3-201ENSMUST00000048065 Dot1lQ6XZL8 1540 aa18.55■□□□□ 0.56
Trem3-201ENSMUST00000048065 Ccer2J3QPU5 274 aa18.55■□□□□ 0.56
Trem3-201ENSMUST00000048065 Washc2Q6PGL7 1334 aa18.54■□□□□ 0.56
Trem3-201ENSMUST00000048065 Rprd2Q6NXI6 1469 aaKnown RBP18.54■□□□□ 0.56
Trem3-201ENSMUST00000048065 Tmem94Q7TSH8 1360 aa18.54■□□□□ 0.56
Trem3-201ENSMUST00000048065 Col18a1P39061 1774 aa18.53■□□□□ 0.56
Trem3-201ENSMUST00000048065 Tom1O88746 492 aa18.53■□□□□ 0.56
Trem3-201ENSMUST00000048065 Mier1Q5UAK0 511 aa18.53■□□□□ 0.56
Trem3-201ENSMUST00000048065 Cdk13Q69ZA1 1511 aaKnown RBP18.53■□□□□ 0.56
Trem3-201ENSMUST00000048065 Eid3Q3V124 375 aa18.52■□□□□ 0.56
Trem3-201ENSMUST00000048065 Gimap5Q8BWF2 308 aa18.51■□□□□ 0.55
Trem3-201ENSMUST00000048065 Myom1Q62234 1667 aaKnown RBP18.5■□□□□ 0.55
Trem3-201ENSMUST00000048065 Rgl3Q3UYI5 709 aa18.49■□□□□ 0.55
Trem3-201ENSMUST00000048065 Stk26Q99JT2 416 aa18.49■□□□□ 0.55
Trem3-201ENSMUST00000048065 Kdm2aP59997 1161 aa18.48■□□□□ 0.55
Trem3-201ENSMUST00000048065 Ttll13A4Q9F6 804 aa18.46■□□□□ 0.55
Trem3-201ENSMUST00000048065 GapdhsQ64467 440 aa18.46■□□□□ 0.55
Trem3-201ENSMUST00000048065 DnmbpQ6TXD4 1580 aa18.46■□□□□ 0.55
Trem3-201ENSMUST00000048065 Pik3r4Q8VD65 1358 aa18.45■□□□□ 0.54
Trem3-201ENSMUST00000048065 Os9Q8K2C7 672 aa18.45■□□□□ 0.54
Trem3-201ENSMUST00000048065 Ppip5k1A2ARP1 1436 aa18.45■□□□□ 0.54
Trem3-201ENSMUST00000048065 Plxnc1Q9QZC2 1574 aa18.44■□□□□ 0.54
Trem3-201ENSMUST00000048065 Atf3Q60765 181 aa18.44■□□□□ 0.54
Trem3-201ENSMUST00000048065 Ifit1bl1D3Z6F0 470 aa18.43■□□□□ 0.54
Trem3-201ENSMUST00000048065 Utp14aQ640M1 767 aaKnown RBP18.42■□□□□ 0.54
Trem3-201ENSMUST00000048065 Fan1Q69ZT1 1020 aa18.42■□□□□ 0.54
Trem3-201ENSMUST00000048065 Nyap1Q6PFX7 833 aa18.41■□□□□ 0.54
Trem3-201ENSMUST00000048065 Usp47Q8BY87 1376 aa18.41■□□□□ 0.54
Trem3-201ENSMUST00000048065 Rims1Q99NE5 1463 aa18.39■□□□□ 0.54
Trem3-201ENSMUST00000048065 Tulp4Q9JIL5 1547 aa18.39■□□□□ 0.54
Trem3-201ENSMUST00000048065 Srpk2O54781 681 aaKnown RBP18.39■□□□□ 0.53
Trem3-201ENSMUST00000048065 Grwd1Q810D6 446 aaKnown RBP18.39■□□□□ 0.53
Trem3-201ENSMUST00000048065 Rock1P70335 1354 aa18.39■□□□□ 0.53
Trem3-201ENSMUST00000048065 Arap3Q8R5G7 1538 aa18.39■□□□□ 0.53
Trem3-201ENSMUST00000048065 Adamts13Q769J6 1426 aa18.38■□□□□ 0.53
Trem3-201ENSMUST00000048065 Unc13bQ9Z1N9 1602 aa18.38■□□□□ 0.53
Trem3-201ENSMUST00000048065 Qtrt2B8ZXI1 415 aa18.37■□□□□ 0.53
Trem3-201ENSMUST00000048065 Hspa5P20029 655 aaKnown RBP18.37■□□□□ 0.53
Trem3-201ENSMUST00000048065 Gm10563F6WIE4 79 aa18.36■□□□□ 0.53
Trem3-201ENSMUST00000048065 Slc5a4bQ91ZP4 660 aa18.36■□□□□ 0.53
Trem3-201ENSMUST00000048065 Nwd1A6H603 1563 aa18.35■□□□□ 0.53
Trem3-201ENSMUST00000048065 Slc52a2Q9D8F3 450 aa18.35■□□□□ 0.53
Trem3-201ENSMUST00000048065 Col14a1Q80X19 1797 aa18.35■□□□□ 0.53
Trem3-201ENSMUST00000048065 Gm20521D3Z5F7 333 aa18.34■□□□□ 0.53
Trem3-201ENSMUST00000048065 Fbln2P37889 1221 aa18.34■□□□□ 0.53
Trem3-201ENSMUST00000048065 Puf60Q3UEB3 564 aaKnown RBP18.34■□□□□ 0.53
Trem3-201ENSMUST00000048065 Ift172Q6VH22 1749 aa18.33■□□□□ 0.52
Trem3-201ENSMUST00000048065 Ddx17Q501J6 650 aaKnown RBP18.33■□□□□ 0.52
Trem3-201ENSMUST00000048065 Neurod1Q60867 357 aa18.33■□□□□ 0.52
Trem3-201ENSMUST00000048065 Pik3c2aQ61194 1686 aa18.33■□□□□ 0.52
Trem3-201ENSMUST00000048065 Q3UJC8 639 aa18.32■□□□□ 0.52
Trem3-201ENSMUST00000048065 Cps1Q8C196 1500 aa18.32■□□□□ 0.52
Trem3-201ENSMUST00000048065 NalcnQ8BXR5 1738 aa18.31■□□□□ 0.52
Trem3-201ENSMUST00000048065 MaddQ80U28 1577 aa18.3■□□□□ 0.52
Trem3-201ENSMUST00000048065 Cep170bQ80U49 1574 aa18.3■□□□□ 0.52
Trem3-201ENSMUST00000048065 Cypt2Q6P924 180 aa18.3■□□□□ 0.52
Trem3-201ENSMUST00000048065 C3P01027 1663 aa18.3■□□□□ 0.52
Trem3-201ENSMUST00000048065 Pik3c2bE9QAN8 1632 aa18.3■□□□□ 0.52
Trem3-201ENSMUST00000048065 GnpatP98192 678 aa18.29■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms