RNA–Protein interactions for RNA: ENSMUST00000030185.4

Tpm1-201, Transcript of Tropomyosin alpha-1 chain, mousemouse

APPRIS ALT1 TSL 2 BASIC

Gene Tpm1, Length 1,797 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-201ENSMUST00000030185 Itsn1Q9Z0R4 1714 aa16.89■□□□□ 0.29
Tpm1-201ENSMUST00000030185 Plxnc1Q9QZC2 1574 aa16.89■□□□□ 0.29
Tpm1-201ENSMUST00000030185 Chd2E9PZM4 1827 aaKnown RBP16.88■□□□□ 0.29
Tpm1-201ENSMUST00000030185 Sall3Q62255 1320 aa16.88■□□□□ 0.29
Tpm1-201ENSMUST00000030185 Neurod1Q60867 357 aa16.87■□□□□ 0.29
Tpm1-201ENSMUST00000030185 Rims1Q99NE5 1463 aa16.86■□□□□ 0.29
Tpm1-201ENSMUST00000030185 Gm13697A2AK42 830 aa16.85■□□□□ 0.29
Tpm1-201ENSMUST00000030185 Zc3h13E9Q784 1729 aaKnown RBP16.85■□□□□ 0.29
Tpm1-201ENSMUST00000030185 Ercc6l2Q9JIM3 1537 aa16.84■□□□□ 0.29
Tpm1-201ENSMUST00000030185 Grwd1Q810D6 446 aaKnown RBP16.83■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Myom1Q62234 1667 aaKnown RBP16.83■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Dapk1Q80YE7 1442 aa16.83■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Bcl9Q9D219 1425 aa16.83■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Ifit1bl1D3Z6F0 470 aa16.82■□□□□ 0.28
Tpm1-201ENSMUST00000030185 RalgapbQ8BQZ4 1484 aa16.81■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Cdk5rap2Q8K389 1822 aa16.81■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Ppargc1bQ8VHJ7 1014 aa16.81■□□□□ 0.28
Tpm1-201ENSMUST00000030185 PtprmP28828 1452 aa16.8■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Naip7Q9JIB3 1402 aa16.8■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Prrc2bQ7TPM1 1486 aaKnown RBP16.8■□□□□ 0.28
Tpm1-201ENSMUST00000030185 PplQ9R269 1755 aa16.79■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Aebp2Q9Z248 504 aaKnown RBP16.79■□□□□ 0.28
Tpm1-201ENSMUST00000030185 4930407I10RikD3Z5T8 1512 aa16.78■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Sipa1l1Q8C0T5 1782 aa16.77■□□□□ 0.28
Tpm1-201ENSMUST00000030185 Gemin5Q8BX17 1502 aaKnown RBP16.77■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Myo3aQ8K3H5 1613 aa16.77■□□□□ 0.27
Tpm1-201ENSMUST00000030185 MlecQ6ZQI3 291 aaKnown RBP16.77■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Eif2ak4Q9QZ05 1648 aa16.76■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Rundc1Q0VDN7 615 aa16.76■□□□□ 0.27
Tpm1-201ENSMUST00000030185 AU022751B1B0V2 589 aa16.74■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Card11Q8CIS0 1159 aa16.74■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Setd1aE9PYH6 1716 aa16.73■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Topaz1E5FYH1 1653 aa16.73■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Arhgef28P97433 1693 aa16.73■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Wdr66E9Q743 1299 aa16.73■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Slc52a2Q9D8F3 450 aa16.73■□□□□ 0.27
Tpm1-201ENSMUST00000030185 MyclP10166 368 aa16.72■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Srpk2O54781 681 aaKnown RBP16.72■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Cwc22Q8C5N3 908 aaKnown RBP16.72■□□□□ 0.27
Tpm1-201ENSMUST00000030185 Kdm2aP59997 1161 aa16.7■□□□□ 0.26
Tpm1-201ENSMUST00000030185 ClspnQ80YR7 1315 aa16.7■□□□□ 0.26
Tpm1-201ENSMUST00000030185 MaddQ80U28 1577 aa16.69■□□□□ 0.26
Tpm1-201ENSMUST00000030185 DnmbpQ6TXD4 1580 aa16.69■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Gm20521D3Z5F7 333 aa16.69■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Ift172Q6VH22 1749 aa16.68■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Stard8Q8K031 1019 aa16.68■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Brwd3A2AHJ4 1799 aa16.68■□□□□ 0.26
Tpm1-201ENSMUST00000030185 GphnQ8BUV3 769 aaKnown RBP16.66■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Dip2aQ8BWT5 1523 aa16.66■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Lmtk3Q5XJV6 1424 aa16.66■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Rock2P70336 1388 aa16.66■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Os9Q8K2C7 672 aa16.66■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Ncoa1P70365 1447 aa16.65■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Fan1Q69ZT1 1020 aa16.65■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Nphp4P59240 1425 aa16.65■□□□□ 0.26
Tpm1-201ENSMUST00000030185 Sin3aQ60520 1274 aaKnown RBP16.64■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Txndc2Q6P902 515 aa16.64■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Puf60Q3UEB3 564 aaKnown RBP16.63■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Pola1P33609 1465 aa16.62■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Lrrc7Q80TE7 1490 aa16.62■□□□□ 0.25
Tpm1-201ENSMUST00000030185 PalldQ9ET54 1408 aa16.61■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Itsn2Q9Z0R6 1659 aa16.61■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Psme1P97371 249 aa16.61■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Srcin1Q9QWI6 1250 aa16.61■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Slit3Q9WVB4 1523 aa16.61■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Shq1Q7TMX5 569 aa16.6■□□□□ 0.25
Tpm1-201ENSMUST00000030185 P3h3Q8CG70 732 aa16.6■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Rimbp3Q3V0F0 1606 aa16.6■□□□□ 0.25
Tpm1-201ENSMUST00000030185 Atp1b4Q99ME6 356 aa16.59■□□□□ 0.25
Tpm1-201ENSMUST00000030185 DiexfQ8BTT6 772 aaKnown RBP16.58■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Usp40Q8BWR4 1235 aa16.58■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Sall2Q9QX96 1004 aa16.58■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Gtf2e1Q9D0D5 440 aa16.57■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Phlpp1Q8CHE4 1687 aa16.56■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Q9D9H8 365 aa16.56■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Gm13695A2AK44 830 aa16.55■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Supt5hO55201 1082 aaKnown RBP16.55■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Plekhg5Q66T02 1073 aa16.55■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Plekhg1F6S200 1446 aa16.54■□□□□ 0.24
Tpm1-201ENSMUST00000030185 IqubQ8CDK3 788 aa16.54■□□□□ 0.24
Tpm1-201ENSMUST00000030185 PzpQ61838 1495 aa16.54■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Arap3Q8R5G7 1538 aa16.54■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Arid4bA2CG63 1314 aaKnown RBP16.53■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Pik3r4Q8VD65 1358 aa16.53■□□□□ 0.24
Tpm1-201ENSMUST00000030185 Rims2Q9EQZ7 1530 aa16.52■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Scaf11E9PZM7 1456 aaKnown RBP16.51■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Tubgcp6G5E8P0 1769 aa16.51■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Cps1Q8C196 1500 aa16.5■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Stag3O70576 1240 aa16.49■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Gm16486A0A1D5RMD1 1434 aa16.49■□□□□ 0.23
Tpm1-201ENSMUST00000030185 IghaA0A0A6YXW6 389 aa16.49■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Cep170bQ80U49 1574 aa16.48■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Med1Q925J9 1575 aa16.47■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Asxl2Q8BZ32 1370 aa16.47■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Utp14aQ640M1 767 aaKnown RBP16.47■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Sbno1Q689Z5 1390 aa16.47■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Abca14E9Q8F8 1683 aa16.46■□□□□ 0.23
Tpm1-201ENSMUST00000030185 Stk26Q99JT2 416 aa16.46■□□□□ 0.22
Tpm1-201ENSMUST00000030185 Pcgf6Q99NA9 353 aa16.45■□□□□ 0.22
Tpm1-201ENSMUST00000030185 Nwd1A6H603 1563 aa16.44■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms