RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 CrbnQ8C7D2 445 aa10.98□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Gapvd1Q6PAR5 1458 aa10.98□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Nolc1E9Q5C9 702 aaKnown RBP10.98□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Hecw1Q8K4P8 1604 aa10.97□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 AampJ3QN89 436 aa10.97□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Stk26Q99JT2 416 aa10.97□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Sbno1Q689Z5 1390 aa10.96□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Zmym4A2A791 1549 aaKnown RBP10.96□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Q7TT23 1179 aa10.96□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Zfp444Q3TDV8 331 aaKnown RBP10.96□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Kif21bQ9QXL1 1668 aa10.95□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Esx1O88933 382 aa10.95□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Chmp4bQ9D8B3 224 aaKnown RBP10.95□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Abcc6Q9R1S7 1498 aa10.94□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 U2af1Q9D883 239 aaKnown RBP10.94□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Plekhh1Q80TI1 1356 aa10.94□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Prkrip1Q9CWV6 186 aaKnown RBP10.94□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 GsdmaQ9EST1 446 aa10.94□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Kif16bB1AVY7 1312 aa10.93□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Znf518aB2RRF6 1478 aaKnown RBP10.93□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Shq1Q7TMX5 569 aa10.93□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Apbb1Q9QXJ1 710 aa10.93□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Dot1lQ6XZL8 1540 aa10.93□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Abcc3B2RX12 1523 aa10.93□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Iqcf3Q9D498 203 aa10.93□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 AnkarA2RT91 1465 aa10.92□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Ciz1Q8VEH2 845 aa10.92□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Utp14aQ640M1 767 aaKnown RBP10.92□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Kif14L0N7N1 1674 aaKnown RBP10.92□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 EspnQ9ET47 871 aa10.92□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Edc4Q3UJB9 1406 aaKnown RBP10.92□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Uggt2E9Q4X2 1504 aa10.92□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 NhsB1AV60 1647 aa10.91□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Sall3Q62255 1320 aa10.91□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Gm32742A0A1B0GT42 1604 aa10.91□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Psme1P97371 249 aa10.9□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Ppm1gQ61074 542 aa10.9□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 FanciQ8K368 1330 aa10.9□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Slc4a3P16283 1227 aa10.9□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Ccar1Q8CH18 1146 aaKnown RBP10.9□□□□□ -0.66
Sf3b1-201ENSMUST00000027127 Atf7ipQ7TT18 1306 aa10.9□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 DiexfQ8BTT6 772 aaKnown RBP10.9□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Kank1E9Q238 1360 aa10.89□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Tsen2Q6P7W5 460 aa10.89□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Chmp5Q9D7S9 219 aa10.89□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Trim26Q99PN3 545 aa10.89□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Ccdc9Q8VC31 543 aaKnown RBP10.89□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Ipo9Q91YE6 1041 aa10.89□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Gsto1O09131 240 aa10.89□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Usp54Q8BL06 1588 aaKnown RBP10.88□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Plch2A2AP18 1501 aa10.88□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Ccdc30Q8BVF4 654 aa10.88□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Txndc2Q6P902 515 aa10.88□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Abca8bQ8K440 1620 aa10.88□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Trim30dE9PWL0 497 aa10.88□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 CanxP35564 591 aaKnown RBP10.87□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Talpid3E9PV87 1520 aa10.87□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Ccdc27Q3V036 639 aa10.87□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Gm156Q58A37 223 aa10.86□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Tarbp1E9Q368 1579 aa10.86□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Cep170Q6A065 1588 aa10.86□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 L3mbtl2P59178 703 aa10.86□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Setd1bQ8CFT2 1985 aa10.86□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Mink1Q9JM52 1308 aa10.86□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Map7O88735 730 aa10.86□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Nos1Q9Z0J4 1429 aa10.86□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Gli2Q0VGT2 1544 aa10.85□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Hsp90ab1P11499 724 aaKnown RBP10.85□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Nphp4P59240 1425 aa10.85□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Plppr3Q7TPB0 716 aa10.85□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Kif1bQ60575 1816 aaKnown RBP10.84□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Map4k4P97820 1233 aaKnown RBP10.84□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 InsrP15208 1372 aa10.84□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Trim58Q5NCC9 485 aa10.84□□□□□ -0.67
Sf3b1-201ENSMUST00000027127 Ksr2Q3UVC0 959 aa10.83□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 B4galnt3Q6L8S8 986 aa10.83□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Atp2b2Q9R0K7 1198 aa10.83□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 DaxxO35613 739 aa10.83□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Znf608Q56A10 1511 aa10.82□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Cald1E9QA15 768 aaKnown RBP10.82□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Kdm5cP41230 1554 aa10.82□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 AatkQ80YE4 1365 aa10.81□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Gm16486A0A1D5RMD1 1434 aa10.81□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Dbr1Q923B1 550 aa10.81□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Q9D9H8 365 aa10.81□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Hsp90aa1P07901 733 aaKnown RBP10.81□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Tex14Q7M6U3 1450 aa10.81□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Skint5A7XUY5 1461 aa10.8□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 PalldQ9ET54 1408 aa10.8□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Tulp4Q9JIL5 1547 aa10.8□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Gm6268A2A3U9 297 aa10.8□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Afap1Q80YS6 731 aa10.8□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Zfyve16Q80U44 1528 aa10.8□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Birc3O08863 600 aa10.79□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Fgd1P52734 960 aa10.79□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 IbtkQ6ZPR6 1352 aaKnown RBP10.79□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Pola1P33609 1465 aa10.79□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 PtprtQ99M80 1454 aa10.79□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Iqgap1Q9JKF1 1657 aaKnown RBP10.79□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 KnstrnQ9D9Z1 312 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms