RNA–Protein interactions for RNA: ENSMUST00000013995.12

Abca4-201, Transcript of Retinal-specific ATP-binding cassette transporter, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Abca4, Length 7,263 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4-201ENSMUST00000013995 Ppip5k1A2ARP1 1436 aa10.21□□□□□ -0.77
Abca4-201ENSMUST00000013995 Dnajc5bQ9CQ94 199 aa10.21□□□□□ -0.77
Abca4-201ENSMUST00000013995 Trim26Q99PN3 545 aa10.21□□□□□ -0.78
Abca4-201ENSMUST00000013995 Cdc42bpaQ3UU96 1719 aa10.21□□□□□ -0.78
Abca4-201ENSMUST00000013995 U2af1Q9D883 239 aaKnown RBP10.2□□□□□ -0.78
Abca4-201ENSMUST00000013995 Dnai1Q8C0M8 701 aa10.2□□□□□ -0.78
Abca4-201ENSMUST00000013995 Zmym4A2A791 1549 aaKnown RBP10.2□□□□□ -0.78
Abca4-201ENSMUST00000013995 SphkapQ6NSW3 1687 aa10.2□□□□□ -0.78
Abca4-201ENSMUST00000013995 Lrriq1Q0P5X1 1673 aa10.2□□□□□ -0.78
Abca4-201ENSMUST00000013995 Kank1E9Q238 1360 aa10.2□□□□□ -0.78
Abca4-201ENSMUST00000013995 Trappc8E9PWG2 1437 aa10.19□□□□□ -0.78
Abca4-201ENSMUST00000013995 Ccar1Q8CH18 1146 aaKnown RBP10.19□□□□□ -0.78
Abca4-201ENSMUST00000013995 Dbr1Q923B1 550 aa10.19□□□□□ -0.78
Abca4-201ENSMUST00000013995 Iqcf3Q9D498 203 aa10.19□□□□□ -0.78
Abca4-201ENSMUST00000013995 GsdmaQ9EST1 446 aa10.19□□□□□ -0.78
Abca4-201ENSMUST00000013995 Puf60Q3UEB3 564 aaKnown RBP10.19□□□□□ -0.78
Abca4-201ENSMUST00000013995 Ciz1Q8VEH2 845 aa10.19□□□□□ -0.78
Abca4-201ENSMUST00000013995 Kdm6bQ5NCY0 1641 aa10.19□□□□□ -0.78
Abca4-201ENSMUST00000013995 Abcc2Q8VI47 1543 aa10.19□□□□□ -0.78
Abca4-201ENSMUST00000013995 Kif21bQ9QXL1 1668 aa10.18□□□□□ -0.78
Abca4-201ENSMUST00000013995 L3mbtl2P59178 703 aa10.18□□□□□ -0.78
Abca4-201ENSMUST00000013995 Ccdc30Q8BVF4 654 aa10.18□□□□□ -0.78
Abca4-201ENSMUST00000013995 Ipo8Q7TMY7 1010 aa10.17□□□□□ -0.78
Abca4-201ENSMUST00000013995 Cdk13Q69ZA1 1511 aaKnown RBP10.17□□□□□ -0.78
Abca4-201ENSMUST00000013995 Pabpn1Q8CCS6 302 aaKnown RBP10.17□□□□□ -0.78
Abca4-201ENSMUST00000013995 Ttc21bQ0HA38 1315 aa10.17□□□□□ -0.78
Abca4-201ENSMUST00000013995 Mbd5B1AYB6 1498 aa10.17□□□□□ -0.78
Abca4-201ENSMUST00000013995 Stk26Q99JT2 416 aa10.16□□□□□ -0.78
Abca4-201ENSMUST00000013995 Fam208aQ69ZR9 1610 aaKnown RBP10.16□□□□□ -0.78
Abca4-201ENSMUST00000013995 Sbno1Q689Z5 1390 aa10.16□□□□□ -0.78
Abca4-201ENSMUST00000013995 ArxO35085 564 aa10.16□□□□□ -0.78
Abca4-201ENSMUST00000013995 Mast1Q9R1L5 1570 aa10.16□□□□□ -0.78
Abca4-201ENSMUST00000013995 Trim58Q5NCC9 485 aa10.15□□□□□ -0.78
Abca4-201ENSMUST00000013995 KnstrnQ9D9Z1 312 aaKnown RBP10.15□□□□□ -0.78
Abca4-201ENSMUST00000013995 Tsen2Q6P7W5 460 aa10.15□□□□□ -0.79
Abca4-201ENSMUST00000013995 Abcc1O35379 1528 aa10.14□□□□□ -0.79
Abca4-201ENSMUST00000013995 Slc52a2Q9D8F3 450 aa10.14□□□□□ -0.79
Abca4-201ENSMUST00000013995 Ksr2Q3UVC0 959 aa10.14□□□□□ -0.79
Abca4-201ENSMUST00000013995 Atf7ipQ7TT18 1306 aa10.13□□□□□ -0.79
Abca4-201ENSMUST00000013995 Fgd1P52734 960 aa10.13□□□□□ -0.79
Abca4-201ENSMUST00000013995 Safb2Q80YR5 991 aaKnown RBP10.13□□□□□ -0.79
Abca4-201ENSMUST00000013995 Bcl11aQ9QYE3 773 aa10.13□□□□□ -0.79
Abca4-201ENSMUST00000013995 Rangap1P46061 589 aaKnown RBP10.12□□□□□ -0.79
Abca4-201ENSMUST00000013995 Ppp1r18Q8BQ30 594 aa10.12□□□□□ -0.79
Abca4-201ENSMUST00000013995 OvosQ3UU35 1456 aa10.12□□□□□ -0.79
Abca4-201ENSMUST00000013995 Neurl4Q5NCX5 1563 aa10.12□□□□□ -0.79
Abca4-201ENSMUST00000013995 Mroh2aD3Z750 1679 aa10.12□□□□□ -0.79
Abca4-201ENSMUST00000013995 Ttll13A4Q9F6 804 aa10.11□□□□□ -0.79
Abca4-201ENSMUST00000013995 HnrnpuQ8VEK3 800 aaKnown RBP10.11□□□□□ -0.79
Abca4-201ENSMUST00000013995 Trpm2Q91YD4 1506 aa10.11□□□□□ -0.79
Abca4-201ENSMUST00000013995 Gm6268A2A3U9 297 aa10.11□□□□□ -0.79
Abca4-201ENSMUST00000013995 Utp14aQ640M1 767 aaKnown RBP10.11□□□□□ -0.79
Abca4-201ENSMUST00000013995 Eif4g3Q80XI3 1579 aaKnown RBP10.1□□□□□ -0.79
Abca4-201ENSMUST00000013995 Dnmt1P13864 1620 aaKnown RBP10.1□□□□□ -0.79
Abca4-201ENSMUST00000013995 Rnf17Q99MV7 1640 aa10.1□□□□□ -0.79
Abca4-201ENSMUST00000013995 AnkarA2RT91 1465 aa10.1□□□□□ -0.79
Abca4-201ENSMUST00000013995 FanciQ8K368 1330 aa10.1□□□□□ -0.79
Abca4-201ENSMUST00000013995 Mre11Q61216 706 aa10.1□□□□□ -0.79
Abca4-201ENSMUST00000013995 Abcc6Q9R1S7 1498 aa10.1□□□□□ -0.79
Abca4-201ENSMUST00000013995 Pak3Q61036 559 aa10.09□□□□□ -0.79
Abca4-201ENSMUST00000013995 Shq1Q7TMX5 569 aa10.09□□□□□ -0.79
Abca4-201ENSMUST00000013995 Atl3Q91YH5 541 aa10.09□□□□□ -0.79
Abca4-201ENSMUST00000013995 Kif14L0N7N1 1674 aaKnown RBP10.09□□□□□ -0.79
Abca4-201ENSMUST00000013995 Hecw1Q8K4P8 1604 aa10.09□□□□□ -0.79
Abca4-201ENSMUST00000013995 Map4k4P97820 1233 aaKnown RBP10.09□□□□□ -0.79
Abca4-201ENSMUST00000013995 Gsto1O09131 240 aa10.08□□□□□ -0.8
Abca4-201ENSMUST00000013995 Dot1lQ6XZL8 1540 aa10.08□□□□□ -0.8
Abca4-201ENSMUST00000013995 Armcx1Q9CX83 456 aa10.08□□□□□ -0.8
Abca4-201ENSMUST00000013995 ChgaP26339 463 aaKnown RBP10.07□□□□□ -0.8
Abca4-201ENSMUST00000013995 Ythdc2B2RR83 1445 aaKnown RBP10.06□□□□□ -0.8
Abca4-201ENSMUST00000013995 Sall3Q62255 1320 aa10.06□□□□□ -0.8
Abca4-201ENSMUST00000013995 Kif1bQ60575 1816 aaKnown RBP10.06□□□□□ -0.8
Abca4-201ENSMUST00000013995 Psme1P97371 249 aa10.06□□□□□ -0.8
Abca4-201ENSMUST00000013995 Irx3P81067 507 aa10.06□□□□□ -0.8
Abca4-201ENSMUST00000013995 Gapvd1Q6PAR5 1458 aa10.06□□□□□ -0.8
Abca4-201ENSMUST00000013995 Mink1Q9JM52 1308 aa10.05□□□□□ -0.8
Abca4-201ENSMUST00000013995 Cald1E9QA15 768 aaKnown RBP10.05□□□□□ -0.8
Abca4-201ENSMUST00000013995 Edc4Q3UJB9 1406 aaKnown RBP10.05□□□□□ -0.8
Abca4-201ENSMUST00000013995 Ccdc171E9Q1U1 1324 aa10.04□□□□□ -0.8
Abca4-201ENSMUST00000013995 Kdm5cP41230 1554 aa10.04□□□□□ -0.8
Abca4-201ENSMUST00000013995 Tex14Q7M6U3 1450 aa10.04□□□□□ -0.8
Abca4-201ENSMUST00000013995 Setd1aE9PYH6 1716 aa10.04□□□□□ -0.8
Abca4-201ENSMUST00000013995 Birc3O08863 600 aa10.04□□□□□ -0.8
Abca4-201ENSMUST00000013995 Kcnh8P59111 1102 aa10.04□□□□□ -0.8
Abca4-201ENSMUST00000013995 Uggt2E9Q4X2 1504 aa10.04□□□□□ -0.8
Abca4-201ENSMUST00000013995 Txndc2Q6P902 515 aa10.03□□□□□ -0.8
Abca4-201ENSMUST00000013995 Cgnl1Q6AW69 1298 aa10.03□□□□□ -0.8
Abca4-201ENSMUST00000013995 Kiaa1210E9Q0C6 1637 aa10.03□□□□□ -0.8
Abca4-201ENSMUST00000013995 Cavin4A2AMM0 362 aa10.03□□□□□ -0.8
Abca4-201ENSMUST00000013995 InsrP15208 1372 aa10.03□□□□□ -0.8
Abca4-201ENSMUST00000013995 G3bp1P97855 465 aaKnown RBP10.03□□□□□ -0.8
Abca4-201ENSMUST00000013995 Ccdc60Q8C4J0 545 aa10.03□□□□□ -0.8
Abca4-201ENSMUST00000013995 Tmco5bQ80X59 307 aa10.02□□□□□ -0.8
Abca4-201ENSMUST00000013995 Liat1Q810M6 228 aa10.02□□□□□ -0.81
Abca4-201ENSMUST00000013995 Ak7Q9D2H2 614 aa10.02□□□□□ -0.81
Abca4-201ENSMUST00000013995 Pank1Q8K4K6 548 aa10.02□□□□□ -0.81
Abca4-201ENSMUST00000013995 Gm16486A0A1D5RMD1 1434 aa10.02□□□□□ -0.81
Abca4-201ENSMUST00000013995 Znf518aB2RRF6 1478 aaKnown RBP10.02□□□□□ -0.81
Abca4-201ENSMUST00000013995 Cep170Q6A065 1588 aa10.02□□□□□ -0.81
Abca4-201ENSMUST00000013995 Cluap1Q8R3P7 413 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms