RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	YUH1	P35127	236 aa		6.56	□□□□□ -1.36
TGA1	tA(UGC)A	POP2	P39008	433 aa		6.56	□□□□□ -1.36
TGA1	tA(UGC)A	BMT5	P40493	336 aa		6.56	□□□□□ -1.36
TGA1	tA(UGC)A	SER2	P42941	309 aa		6.56	□□□□□ -1.36
TGA1	tA(UGC)A	RAI1	P53063	387 aa	Known RBP	6.56	□□□□□ -1.36
TGA1	tA(UGC)A	SLX9	P53251	210 aa	Predicted RBP	6.56	□□□□□ -1.36
TGA1	tA(UGC)A	NRG1	Q03125	231 aa		6.56	□□□□□ -1.36
TGA1	tA(UGC)A	DPB4	Q04603	196 aa	Known RBP	6.56	□□□□□ -1.36
TGA1	tA(UGC)A	FCY1	Q12178	158 aa		6.56	□□□□□ -1.36
TGA1	tA(UGC)A	PET54	P10834	293 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	MIR1	P23641	311 aa	Known RBP	6.55	□□□□□ -1.36
TGA1	tA(UGC)A	RPL5	P26321	297 aa	Known RBP	6.55	□□□□□ -1.36
TGA1	tA(UGC)A	COQ2	P32378	372 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	SEC66	P33754	206 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	UTP11	P34247	250 aa	Predicted RBP	6.55	□□□□□ -1.36
TGA1	tA(UGC)A	IPI1	P38803	334 aa	Predicted RBP	6.55	□□□□□ -1.36
TGA1	tA(UGC)A	PSD1	P39006	500 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	HPA3	P39979	161 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	TPN1	P53099	579 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	TY1A-DR2	Q03964	440 aa	Known RBP	6.55	□□□□□ -1.36
TGA1	tA(UGC)A	PHO92	Q06390	306 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	YPD1	Q07688	167 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	YLR031W	Q07978	186 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	BOL1	Q3E793	110 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	PET20	Q99373	253 aa		6.55	□□□□□ -1.36
TGA1	tA(UGC)A	RAD52	P06778	471 aa	Known RBP	6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YER190C-B	P0CX94	160 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YEL077W-A	P0CX95	160 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YGR296C-B	P0CX96	160 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YPL283W-B	P0CX97	160 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YPR204C-A	P0CX98	160 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YFL068W	P0CX99	160 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YLL066W-A	P0CY00	160 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YLL067W-A	P0CY01	160 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	CPR4	P25334	318 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	MIT1	P40002	666 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	WWM1	P43582	211 aa	Known RBP	6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YJR056C	P47115	236 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YML018C	Q03730	393 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	HOF1	Q05080	669 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	YDL086W	Q07505	273 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	SWT1	Q12104	458 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	MED4	Q12343	284 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	UBA3	Q99344	299 aa		6.54	□□□□□ -1.36
TGA1	tA(UGC)A	PUP1	P25043	261 aa		6.53	□□□□□ -1.36
TGA1	tA(UGC)A	LSB5	P25369	354 aa		6.53	□□□□□ -1.36
TGA1	tA(UGC)A	ICS2	P38284	255 aa		6.53	□□□□□ -1.36
TGA1	tA(UGC)A	AIM20	P40451	204 aa		6.53	□□□□□ -1.36
TGA1	tA(UGC)A	FIP1	P45976	327 aa		6.53	□□□□□ -1.36
TGA1	tA(UGC)A	ALG9	P53868	555 aa	Known RBP	6.53	□□□□□ -1.36
TGA1	tA(UGC)A	SOG2	Q08817	791 aa		6.53	□□□□□ -1.36
TGA1	tA(UGC)A	CDC34	P14682	295 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	PHO85	P17157	305 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	YMR31	P19955	123 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	ROX3	P25046	220 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	YCR061W	P25639	631 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	TRR1	P29509	319 aa	Known RBP	6.52	□□□□□ -1.37
TGA1	tA(UGC)A	HYM1	P32464	399 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	PCL7	P40186	285 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	AGE2	P40529	298 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	RPA34	P47006	233 aa	Predicted RBP	6.52	□□□□□ -1.37
TGA1	tA(UGC)A	YGR151C	P53287	111 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	TSA2	Q04120	196 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	LAS17	Q12446	633 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	YGR035W-A	Q45U48	73 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	HUG1	Q6Q5K6	68 aa		6.52	□□□□□ -1.37
TGA1	tA(UGC)A	RPN13	O13563	156 aa		6.51	□□□□□ -1.37
TGA1	tA(UGC)A	CKA1	P15790	372 aa		6.51	□□□□□ -1.37
TGA1	tA(UGC)A	CDC23	P16522	626 aa		6.51	□□□□□ -1.37
TGA1	tA(UGC)A	INO2	P26798	304 aa		6.51	□□□□□ -1.37
TGA1	tA(UGC)A	RNP1	P32385	249 aa		6.51	□□□□□ -1.37
TGA1	tA(UGC)A	PRE3	P38624	215 aa		6.51	□□□□□ -1.37
TGA1	tA(UGC)A	TIF11	P38912	153 aa	Known RBP	6.51	□□□□□ -1.37
TGA1	tA(UGC)A	SSO2	P39926	295 aa		6.51	□□□□□ -1.37
TGA1	tA(UGC)A	YFL054C	P43549	646 aa		6.51	□□□□□ -1.37
TGA1	tA(UGC)A	LSM1	P47017	172 aa	Known RBP	6.51	□□□□□ -1.37
TGA1	tA(UGC)A	CWC25	P53854	179 aa	Known RBP	6.51	□□□□□ -1.37
TGA1	tA(UGC)A	LSM7	P53905	115 aa	Known RBP	6.51	□□□□□ -1.37
TGA1	tA(UGC)A	SMX3	P54999	86 aa	Predicted RBP	6.51	□□□□□ -1.37
TGA1	tA(UGC)A	YPL199C	Q08954	240 aa		6.51	□□□□□ -1.37
TGA1	tA(UGC)A	ILV5	P06168	395 aa	Known RBP	6.5	□□□□□ -1.37
TGA1	tA(UGC)A	YCP4	P25349	247 aa	Known RBP	6.5	□□□□□ -1.37
TGA1	tA(UGC)A	YKR045C	P36138	183 aa		6.5	□□□□□ -1.37
TGA1	tA(UGC)A	YDL186W	P48568	277 aa		6.5	□□□□□ -1.37
TGA1	tA(UGC)A	LPP1	Q04396	274 aa		6.5	□□□□□ -1.37
TGA1	tA(UGC)A	SPG4	Q04438	115 aa		6.5	□□□□□ -1.37
TGA1	tA(UGC)A	YOS1	Q3E834	85 aa		6.5	□□□□□ -1.37
TGA1	tA(UGC)A	RPL9A	P05738	191 aa	Known RBP	6.49	□□□□□ -1.37
TGA1	tA(UGC)A	POP8	P38208	133 aa		6.49	□□□□□ -1.37
TGA1	tA(UGC)A	YJL213W	P40896	331 aa		6.49	□□□□□ -1.37
TGA1	tA(UGC)A	AIM25	P47140	327 aa		6.49	□□□□□ -1.37
TGA1	tA(UGC)A	RPL9B	P51401	191 aa	Known RBP	6.49	□□□□□ -1.37
TGA1	tA(UGC)A	YIP1	P53039	248 aa		6.49	□□□□□ -1.37
TGA1	tA(UGC)A	RSM27	P53305	110 aa		6.49	□□□□□ -1.37
TGA1	tA(UGC)A	YML122C	Q03207	126 aa		6.49	□□□□□ -1.37
TGA1	tA(UGC)A	THI74	Q04083	370 aa		6.49	□□□□□ -1.37
TGA1	tA(UGC)A	VBA1	Q04301	562 aa		6.49	□□□□□ -1.37
TGA1	tA(UGC)A	MCH1	Q07376	486 aa		6.49	□□□□□ -1.37
TGA1	tA(UGC)A	SCP1	Q08873	200 aa		6.49	□□□□□ -1.37
TGA1	tA(UGC)A	DIT1	P21623	536 aa		6.48	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms