RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 KIN28P06242 306 aa-2.08□□□□□ -2.74
snR47snR47 YLR156WP0CE96 114 aa-2.08□□□□□ -2.74
snR47snR47 YLR159WP0CE97 114 aa-2.08□□□□□ -2.74
snR47snR47 YLR161WP0CE98 114 aa-2.08□□□□□ -2.74
snR47snR47 SMI1P32566 505 aa-2.08□□□□□ -2.74
snR47snR47 ECM4P36156 370 aa-2.08□□□□□ -2.74
snR47snR47 DSN1P40568 576 aa-2.08□□□□□ -2.74
snR47snR47 ALB1P47019 175 aaPredicted RBP-2.08□□□□□ -2.74
snR47snR47 BER1Q06688 274 aaKnown RBP-2.08□□□□□ -2.74
snR47snR47 DUR1,2P32528 1835 aaKnown RBP-2.09□□□□□ -2.74
snR47snR47 YAR023CD6VPM8 179 aa-2.09□□□□□ -2.74
snR47snR47 YKR104WP0CE69 306 aa-2.09□□□□□ -2.74
snR47snR47 DAD2P36162 133 aa-2.09□□□□□ -2.74
snR47snR47 YNL046WP53956 172 aa-2.09□□□□□ -2.74
snR47snR47 YMR321CQ04898 105 aa-2.09□□□□□ -2.74
snR47snR47 TIM9O74700 87 aa-2.1□□□□□ -2.75
snR47snR47 FRS2P15625 503 aaKnown RBP-2.1□□□□□ -2.75
snR47snR47 CDC10P25342 322 aaKnown RBP-2.1□□□□□ -2.75
snR47snR47 ASF2P32448 525 aaPredicted RBP-2.1□□□□□ -2.75
snR47snR47 URA8P38627 578 aaPredicted RBP-2.1□□□□□ -2.75
snR47snR47 SNZ3P43545 298 aa-2.1□□□□□ -2.75
snR47snR47 YML6P51998 286 aa-2.1□□□□□ -2.75
snR47snR47 NUP84P52891 726 aa-2.1□□□□□ -2.75
snR47snR47 THG1P53215 237 aaKnown RBP-2.1□□□□□ -2.75
snR47snR47 ABF2Q02486 183 aa-2.1□□□□□ -2.75
snR47snR47 SSQ1Q05931 657 aaPredicted RBP-2.1□□□□□ -2.75
snR47snR47 PRP11Q07350 266 aaPredicted RBP-2.1□□□□□ -2.75
snR47snR47 RRP40Q08285 240 aaKnown RBP-2.1□□□□□ -2.75
snR47snR47 YOR072WQ08486 104 aa-2.1□□□□□ -2.75
snR47snR47 YOR342CQ12182 319 aa-2.1□□□□□ -2.75
snR47snR47 PAR32Q12515 295 aaKnown RBP-2.1□□□□□ -2.75
snR47snR47 ATG17Q06410 417 aa-2.11□□□□□ -2.75
snR47snR47 PML1Q07930 204 aaPredicted RBP-2.11□□□□□ -2.75
snR47snR47 SKS1Q12505 502 aa-2.11□□□□□ -2.75
snR47snR47 CAR2P07991 424 aaKnown RBP-2.12□□□□□ -2.75
snR47snR47 YPR170W-BP0C5R9 85 aa-2.12□□□□□ -2.75
snR47snR47 TAL1P15019 335 aaKnown RBP-2.12□□□□□ -2.75
snR47snR47 RPS5P26783 225 aaKnown RBP-2.12□□□□□ -2.75
snR47snR47 PAN3P36102 679 aaPredicted RBP-2.12□□□□□ -2.75
snR47snR47 PAM17P36147 197 aa-2.12□□□□□ -2.75
snR47snR47 ETR1P38071 380 aa-2.12□□□□□ -2.75
snR47snR47 IRC22P40006 225 aa-2.12□□□□□ -2.75
snR47snR47 CAT5P41735 233 aa-2.12□□□□□ -2.75
snR47snR47 YLR413WQ06689 675 aa-2.12□□□□□ -2.75
snR47snR47 POL2P21951 2222 aaKnown RBP-2.13□□□□□ -2.75
snR47snR47 ERD2P18414 219 aa-2.13□□□□□ -2.75
snR47snR47 PPA2P28239 310 aa-2.13□□□□□ -2.75
snR47snR47 SHB17P36136 271 aaKnown RBP-2.13□□□□□ -2.75
snR47snR47 MRPL28P36527 147 aa-2.13□□□□□ -2.75
snR47snR47 GDI1P39958 451 aaKnown RBP-2.13□□□□□ -2.75
snR47snR47 DID2P69771 204 aa-2.13□□□□□ -2.75
snR47snR47 LAP3Q01532 483 aaKnown RBP RIP-Chip data-2.13□□□□□ -2.75not detected
snR47snR47 SNZ1Q03148 297 aa-2.13□□□□□ -2.75
snR47snR47 FMN1Q03778 218 aa-2.13□□□□□ -2.75
snR47snR47 RNH202Q05635 350 aa-2.13□□□□□ -2.75
snR47snR47 YPL229WQ99395 206 aa-2.13□□□□□ -2.75
snR47snR47 INH1P01097 85 aa-2.14□□□□□ -2.75
snR47snR47 RIB7P33312 244 aa-2.14□□□□□ -2.75
snR47snR47 MRPL39P36533 70 aa-2.14□□□□□ -2.75
snR47snR47 HSM3P38348 480 aa-2.14□□□□□ -2.75
snR47snR47 AIM25P47140 327 aa-2.14□□□□□ -2.75
snR47snR47 PRO2P54885 456 aaKnown RBP-2.14□□□□□ -2.75
snR47snR47 SPC19Q03954 165 aa-2.14□□□□□ -2.75
snR47snR47 SPG4Q04438 115 aa-2.14□□□□□ -2.75
snR47snR47 YML096WQ04489 525 aa-2.14□□□□□ -2.75
snR47snR47 VAC14Q06708 880 aa-2.14□□□□□ -2.75
snR47snR47 PST2Q12335 198 aaKnown RBP-2.14□□□□□ -2.75
snR47snR47 RPL27AP0C2H6 136 aaKnown RBP-2.15□□□□□ -2.75
snR47snR47 MEK1P24719 497 aaPredicted RBP-2.15□□□□□ -2.75
snR47snR47 ARO7P32178 256 aa-2.15□□□□□ -2.75
snR47snR47 MGM101P32787 269 aaKnown RBP-2.15□□□□□ -2.75
snR47snR47 RIB1P38066 345 aa-2.15□□□□□ -2.75
snR47snR47 ILM1P47155 203 aa-2.15□□□□□ -2.75
snR47snR47 YGL230CP53074 147 aa-2.15□□□□□ -2.75
snR47snR47 YNL122CP53921 115 aaPredicted RBP-2.15□□□□□ -2.75
snR47snR47 YLR173WQ06247 608 aa-2.15□□□□□ -2.75
snR47snR47 RIF1P29539 1916 aa-2.15□□□□□ -2.75
snR47snR47 PHO85P17157 305 aa-2.16□□□□□ -2.76
snR47snR47 YPK2P18961 677 aa-2.16□□□□□ -2.76
snR47snR47 OPI1P21957 404 aa-2.16□□□□□ -2.76
snR47snR47 POP4P38336 279 aa-2.16□□□□□ -2.76
snR47snR47 GOS1P38736 223 aa-2.16□□□□□ -2.76
snR47snR47 AIM20P40451 204 aa-2.16□□□□□ -2.76
snR47snR47 RIB4P50861 169 aaPredicted RBP-2.16□□□□□ -2.76
snR47snR47 MPC3P53311 146 aa-2.16□□□□□ -2.76
snR47snR47 MATALPHA2P0CY08 210 aa-2.17□□□□□ -2.76
snR47snR47 HMLALPHA2P0CY09 210 aa-2.17□□□□□ -2.76
snR47snR47 GPI12P23797 304 aa-2.17□□□□□ -2.76
snR47snR47 ATG22P25568 528 aa-2.17□□□□□ -2.76
snR47snR47 SKG1P36169 355 aa-2.17□□□□□ -2.76
snR47snR47 SEC28P40509 296 aaKnown RBP-2.17□□□□□ -2.76
snR47snR47 CIN5P40917 295 aa-2.17□□□□□ -2.76
snR47snR47 SNZ2P53824 298 aa-2.17□□□□□ -2.76
snR47snR47 LPP1Q04396 274 aa-2.17□□□□□ -2.76
snR47snR47 YDL121CQ07541 149 aa-2.17□□□□□ -2.76
snR47snR47 GET4Q12125 312 aa-2.17□□□□□ -2.76
snR47snR47 FCY1Q12178 158 aa-2.17□□□□□ -2.76
snR47snR47 SPT7P35177 1332 aa-2.17□□□□□ -2.76
snR47snR47 HAP2P06774 265 aa-2.18□□□□□ -2.76
snR47snR47 VPS3P23643 1011 aa-2.18□□□□□ -2.76
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms