RNA–Protein interactions for RNA: snR190

snR190, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR190, Length 190 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR190snR190 LPP1Q04396 274 aa0.14□□□□□ -2.39
snR190snR190 FSF1Q12029 327 aaKnown RBP0.14□□□□□ -2.39
snR190snR190 TSC3Q3E790 80 aa0.14□□□□□ -2.39
snR190snR190 ATG40Q99325 256 aa0.14□□□□□ -2.39
snR190snR190 SIR2P06700 562 aa0.13□□□□□ -2.39
snR190snR190 YLR156WP0CE96 114 aa0.13□□□□□ -2.39
snR190snR190 YLR159WP0CE97 114 aa0.13□□□□□ -2.39
snR190snR190 YLR161WP0CE98 114 aa0.13□□□□□ -2.39
snR190snR190 CDC10P25342 322 aaKnown RBP0.13□□□□□ -2.39
snR190snR190 MRPL28P36527 147 aa0.13□□□□□ -2.39
snR190snR190 DOG2P38773 246 aa0.13□□□□□ -2.39
snR190snR190 HOC1P47124 396 aa0.13□□□□□ -2.39
snR190snR190 EAF6P47128 113 aa0.13□□□□□ -2.39
snR190snR190 MCM22P47167 239 aa0.13□□□□□ -2.39
snR190snR190 YNL247WP53852 767 aaKnown RBP0.13□□□□□ -2.39
snR190snR190 CWC27Q02770 301 aa0.13□□□□□ -2.39
snR190snR190 SWP1Q02795 286 aa0.13□□□□□ -2.39
snR190snR190 YML108WQ03759 105 aa0.13□□□□□ -2.39
snR190snR190 LCL2Q08045 131 aa0.13□□□□□ -2.39
snR190snR190 GPM2Q12008 311 aa0.13□□□□□ -2.39
snR190snR190 YOR029WQ12243 111 aa0.13□□□□□ -2.39
snR190snR190 LSO2Q3E772 92 aaKnown RBP0.13□□□□□ -2.39
snR190snR190 UTP20P35194 2493 aaKnown RBP0.12□□□□□ -2.39
snR190snR190 MEC1P38111 2368 aa0.12□□□□□ -2.39
snR190snR190 YLR236CA0A023PZG4 107 aa0.12□□□□□ -2.39
snR190snR190 TIM9O74700 87 aa0.12□□□□□ -2.39
snR190snR190 SEC11P15367 167 aa0.12□□□□□ -2.39
snR190snR190 SHE2P36068 246 aaKnown RBP RIP-Chip data0.12□□□□□ -2.39not detected
snR190snR190 YHL042WP38729 150 aa0.12□□□□□ -2.39
snR190snR190 GVP36P40531 326 aaKnown RBP0.12□□□□□ -2.39
snR190snR190 TRM9P49957 279 aa0.12□□□□□ -2.39
snR190snR190 NSA1P53136 463 aaPredicted RBP0.12□□□□□ -2.39
snR190snR190 YOL160WQ08321 113 aa0.12□□□□□ -2.39
snR190snR190 DRS2P39524 1355 aa0.11□□□□□ -2.39
snR190snR190 OM45P16547 393 aa0.11□□□□□ -2.39
snR190snR190 DBF2P22204 572 aa0.11□□□□□ -2.39
snR190snR190 RPT5P33297 434 aaKnown RBP0.11□□□□□ -2.39
snR190snR190 YBR285WP38354 144 aa0.11□□□□□ -2.39
snR190snR190 VMA22P38784 181 aa0.11□□□□□ -2.39
snR190snR190 RTT105P40063 208 aa0.11□□□□□ -2.39
snR190snR190 PRE6P40303 254 aaKnown RBP0.11□□□□□ -2.39
snR190snR190 HYR1P40581 163 aaKnown RBP0.11□□□□□ -2.39
snR190snR190 PRM8P53174 237 aa0.11□□□□□ -2.39
snR190snR190 CUE4Q04201 117 aaPredicted RBP0.11□□□□□ -2.39
snR190snR190 YHR007C-AQ07074 71 aa0.11□□□□□ -2.39
snR190snR190 MCP1Q12106 302 aa0.11□□□□□ -2.39
snR190snR190 YOL107WQ12239 342 aa0.11□□□□□ -2.39
snR190snR190 POL2P21951 2222 aaKnown RBP0.11□□□□□ -2.39
snR190snR190 YIL177CP40434 1758 aa0.11□□□□□ -2.39
snR190snR190 YJL225CP40889 1758 aa0.11□□□□□ -2.39
snR190snR190 GCN1P33892 2672 aaKnown RBP0.1□□□□□ -2.39
snR190snR190 URA2P07259 2214 aaKnown RBP0.1□□□□□ -2.39
snR190snR190 HFA1P32874 2273 aa0.1□□□□□ -2.39
snR190snR190 MDM35O60200 86 aa0.1□□□□□ -2.39
snR190snR190 SPT3P06844 337 aa0.1□□□□□ -2.39
snR190snR190 BCY1P07278 416 aaKnown RBP0.1□□□□□ -2.39
snR190snR190 RPO26P20435 155 aa0.1□□□□□ -2.39
snR190snR190 SEC17P32602 292 aa0.1□□□□□ -2.39
snR190snR190 NTF2P33331 125 aaKnown RBP0.1□□□□□ -2.39
snR190snR190 SKG1P36169 355 aa0.1□□□□□ -2.39
snR190snR190 YER034WP40022 185 aaKnown RBP0.1□□□□□ -2.39
snR190snR190 MRPL50P53724 139 aa0.1□□□□□ -2.39
snR190snR190 KRE28Q04431 385 aa0.1□□□□□ -2.39
snR190snR190 YMR252CQ04814 134 aa0.1□□□□□ -2.39
snR190snR190 PAM18Q07914 168 aa0.1□□□□□ -2.39
snR190snR190 RAD28Q12021 506 aa0.1□□□□□ -2.39
snR190snR190 TDA8Q6B2U8 126 aa0.1□□□□□ -2.39
snR190snR190 FAS1P07149 2051 aaKnown RBP0.1□□□□□ -2.39
snR190snR190 SEN1Q00416 2231 aaKnown RBP0.09□□□□□ -2.39
snR190snR190 MRPL25P23369 157 aa0.09□□□□□ -2.4
snR190snR190 YCL042WP25572 119 aa0.09□□□□□ -2.4
snR190snR190 STP22P25604 385 aa0.09□□□□□ -2.4
snR190snR190 TCA17P32613 152 aa0.09□□□□□ -2.4
snR190snR190 UTP30P36144 274 aaKnown RBP0.09□□□□□ -2.4
snR190snR190 CUE1P38428 203 aa0.09□□□□□ -2.4
snR190snR190 YEL008WP40001 126 aa0.09□□□□□ -2.4
snR190snR190 YEA4P40004 342 aa0.09□□□□□ -2.4
snR190snR190 YFH7P43591 353 aa0.09□□□□□ -2.4
snR190snR190 BNA6P43619 295 aa0.09□□□□□ -2.4
snR190snR190 NUP84P52891 726 aa0.09□□□□□ -2.4
snR190snR190 DIG2Q03373 323 aaKnown RBP0.09□□□□□ -2.4
snR190snR190 KAP95Q06142 861 aaKnown RBP0.09□□□□□ -2.4
snR190snR190 YLR173WQ06247 608 aa0.09□□□□□ -2.4
snR190snR190 YRA1Q12159 226 aaKnown RBP0.09□□□□□ -2.4
snR190snR190 ATG31Q12421 196 aa0.09□□□□□ -2.4
snR190snR190 CDC28P00546 298 aaKnown RBP0.08□□□□□ -2.4
snR190snR190 CDC36P06100 191 aaPredicted RBP0.08□□□□□ -2.4
snR190snR190 RPL27AP0C2H6 136 aaKnown RBP0.08□□□□□ -2.4
snR190snR190 URA6P15700 204 aa0.08□□□□□ -2.4
snR190snR190 UGX2P32772 223 aa0.08□□□□□ -2.4
snR190snR190 APS1P35181 156 aa0.08□□□□□ -2.4
snR190snR190 LDB7P38210 180 aa0.08□□□□□ -2.4
snR190snR190 YPL073CP40323 161 aa0.08□□□□□ -2.4
snR190snR190 FAR7P43592 221 aa0.08□□□□□ -2.4
snR190snR190 LIA1P47120 325 aaKnown RBP0.08□□□□□ -2.4
snR190snR190 YNL134CP53912 376 aaKnown RBP0.08□□□□□ -2.4
snR190snR190 YDR274CP87283 123 aa0.08□□□□□ -2.4
snR190snR190 YDR249CQ03787 373 aa0.08□□□□□ -2.4
snR190snR190 CDC123Q05791 360 aa0.08□□□□□ -2.4
snR190snR190 BLM10P43583 2143 aa0.07□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 103.1 ms