RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W CMK2P22517 447 aa1.33□□□□□ -2.2
CTF4YPR135W MIR1P23641 311 aaKnown RBP1.33□□□□□ -2.2
CTF4YPR135W YCR087C-AP37263 153 aa1.33□□□□□ -2.2
CTF4YPR135W MBA1P38300 278 aa1.33□□□□□ -2.2
CTF4YPR135W YBR220CP38318 560 aa1.33□□□□□ -2.2
CTF4YPR135W YHI9P38765 294 aa1.33□□□□□ -2.2
CTF4YPR135W COX15P40086 486 aa1.33□□□□□ -2.2
CTF4YPR135W YIA6P40556 373 aa1.33□□□□□ -2.2
CTF4YPR135W YNL320WP42840 284 aa1.33□□□□□ -2.2
CTF4YPR135W ALB1P47019 175 aaPredicted RBP1.33□□□□□ -2.2
CTF4YPR135W YJR085CP47131 105 aaKnown RBP1.33□□□□□ -2.2
CTF4YPR135W YJR141WP47172 347 aaPredicted RBP1.33□□□□□ -2.2
CTF4YPR135W NUP57P48837 541 aa1.33□□□□□ -2.2
CTF4YPR135W JAC1P53193 184 aa1.33□□□□□ -2.2
CTF4YPR135W YGR015CP53208 328 aa1.33□□□□□ -2.2
CTF4YPR135W HCH1P53834 153 aa1.33□□□□□ -2.2
CTF4YPR135W TPS1Q00764 495 aaKnown RBP1.33□□□□□ -2.2
CTF4YPR135W GMC1Q04399 608 aa1.33□□□□□ -2.2
CTF4YPR135W RIM9Q04734 239 aa1.33□□□□□ -2.2
CTF4YPR135W ERP1Q05359 219 aaKnown RBP1.33□□□□□ -2.2
CTF4YPR135W WTM1Q12363 437 aaKnown RBP1.33□□□□□ -2.2
CTF4YPR135W RAX2Q12465 1220 aa1.33□□□□□ -2.2
CTF4YPR135W TRP1P00912 224 aa1.32□□□□□ -2.2
CTF4YPR135W RPL22AP05749 121 aaKnown RBP1.32□□□□□ -2.2
CTF4YPR135W SPT3P06844 337 aa1.32□□□□□ -2.2
CTF4YPR135W GCY1P14065 312 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
CTF4YPR135W CPR1P14832 162 aaKnown RBP1.32□□□□□ -2.2
CTF4YPR135W CBS2P14905 389 aa1.32□□□□□ -2.2
CTF4YPR135W GRX2P17695 143 aaKnown RBP1.32□□□□□ -2.2
CTF4YPR135W DPB2P24482 689 aaPredicted RBP1.32□□□□□ -2.2
CTF4YPR135W DEP1P31385 405 aa1.32□□□□□ -2.2
CTF4YPR135W NAT2P37293 288 aa1.32□□□□□ -2.2
CTF4YPR135W YGL034CP53186 121 aa1.32□□□□□ -2.2
CTF4YPR135W SSU72P53538 206 aaPredicted RBP1.32□□□□□ -2.2
CTF4YPR135W PET191Q02772 108 aa1.32□□□□□ -2.2
CTF4YPR135W RRP17Q04031 235 aaPredicted RBP1.32□□□□□ -2.2
CTF4YPR135W SEI1Q06058 285 aa1.32□□□□□ -2.2
CTF4YPR135W GGA1Q06336 557 aa1.32□□□□□ -2.2
CTF4YPR135W YPR091CQ06833 770 aa1.32□□□□□ -2.2
CTF4YPR135W YNG1Q08465 219 aa1.32□□□□□ -2.2
CTF4YPR135W ESA1Q08649 445 aa1.32□□□□□ -2.2
CTF4YPR135W YAL064W-BO13512 126 aa1.32□□□□□ -2.2
CTF4YPR135W RPL28P02406 149 aaKnown RBP1.32□□□□□ -2.2
CTF4YPR135W YHR214C-DP0CX93 97 aa1.32□□□□□ -2.2
CTF4YPR135W MRPL20P22354 195 aaPredicted RBP1.32□□□□□ -2.2
CTF4YPR135W INO2P26798 304 aa1.32□□□□□ -2.2
CTF4YPR135W VMA11P32842 164 aa1.32□□□□□ -2.2
CTF4YPR135W VPS51P36116 164 aa1.32□□□□□ -2.2
CTF4YPR135W HEK2P38199 381 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
CTF4YPR135W YHL049CP38722 271 aa1.32□□□□□ -2.2
CTF4YPR135W COX14P39103 70 aa1.32□□□□□ -2.2
CTF4YPR135W SOK1P40317 901 aa1.32□□□□□ -2.2
CTF4YPR135W BNS1P50084 137 aa1.32□□□□□ -2.2
CTF4YPR135W SHY1P53266 389 aa1.32□□□□□ -2.2
CTF4YPR135W YNR066CP53752 436 aa1.32□□□□□ -2.2
CTF4YPR135W NRK1P53915 240 aa1.32□□□□□ -2.2
CTF4YPR135W YPR098CQ06089 161 aa1.32□□□□□ -2.2
CTF4YPR135W SEC10Q06245 871 aa1.32□□□□□ -2.2
CTF4YPR135W DXO1Q06349 442 aa1.32□□□□□ -2.2
CTF4YPR135W YDL114WQ07530 308 aa1.32□□□□□ -2.2
CTF4YPR135W RRP40Q08285 240 aaKnown RBP1.32□□□□□ -2.2
CTF4YPR135W RRG7Q08774 242 aaPredicted RBP1.32□□□□□ -2.2
CTF4YPR135W RFM1Q12192 310 aa1.32□□□□□ -2.2
CTF4YPR135W IFM1P25038 676 aa1.31□□□□□ -2.2
CTF4YPR135W CDC50P25656 391 aa1.31□□□□□ -2.2
CTF4YPR135W UBC8P28263 218 aa1.31□□□□□ -2.2
CTF4YPR135W SDH3P33421 198 aa1.31□□□□□ -2.2
CTF4YPR135W MED8P38304 223 aa1.31□□□□□ -2.2
CTF4YPR135W CUE1P38428 203 aa1.31□□□□□ -2.2
CTF4YPR135W SRP14P38985 146 aa1.31□□□□□ -2.2
CTF4YPR135W MAM33P40513 266 aa1.31□□□□□ -2.2
CTF4YPR135W EGT2P42835 1041 aa1.31□□□□□ -2.2
CTF4YPR135W IRC18P47056 224 aa1.31□□□□□ -2.2
CTF4YPR135W MMS2P53152 137 aa1.31□□□□□ -2.2
CTF4YPR135W LSM3P57743 89 aaKnown RBP1.31□□□□□ -2.2
CTF4YPR135W RAF1Q06891 181 aa1.31□□□□□ -2.2
CTF4YPR135W HNT3Q08702 217 aa1.31□□□□□ -2.2
CTF4YPR135W YOR292CQ08743 309 aa1.31□□□□□ -2.2
CTF4YPR135W ATP16Q12165 160 aa1.31□□□□□ -2.2
CTF4YPR135W PCL9Q12477 304 aa1.31□□□□□ -2.2
CTF4YPR135W PIS1P06197 220 aaKnown RBP1.31□□□□□ -2.2
CTF4YPR135W STE7P06784 515 aa1.31□□□□□ -2.2
CTF4YPR135W RPS18AP0CX55 146 aaKnown RBP1.31□□□□□ -2.2
CTF4YPR135W RPS18BP0CX56 146 aaPredicted RBP1.31□□□□□ -2.2
CTF4YPR135W CUP2P15315 225 aa1.31□□□□□ -2.2
CTF4YPR135W MIG1P27705 504 aa1.31□□□□□ -2.2
CTF4YPR135W KTI12P34253 313 aaKnown RBP1.31□□□□□ -2.2
CTF4YPR135W ANR2P36090 516 aaPredicted RBP1.31□□□□□ -2.2
CTF4YPR135W TRM5P38793 499 aa1.31□□□□□ -2.2
CTF4YPR135W YND1P40009 630 aa1.31□□□□□ -2.2
CTF4YPR135W KRE29P40026 464 aa1.31□□□□□ -2.2
CTF4YPR135W MOB2P43563 287 aa1.31□□□□□ -2.2
CTF4YPR135W MCM22P47167 239 aa1.31□□□□□ -2.2
CTF4YPR135W NSA1P53136 463 aaPredicted RBP1.31□□□□□ -2.2
CTF4YPR135W MPA43P53583 542 aaPredicted RBP1.31□□□□□ -2.2
CTF4YPR135W WSC2P53832 503 aa1.31□□□□□ -2.2
CTF4YPR135W PDR17P53844 350 aa1.31□□□□□ -2.2
CTF4YPR135W FMP41P53889 259 aaKnown RBP1.31□□□□□ -2.2
CTF4YPR135W YMR315WQ04869 349 aaKnown RBP1.31□□□□□ -2.2
CTF4YPR135W NOC4Q06512 552 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms