RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN7	YPR108W	PEX7	P39108	375 aa		5.09	□□□□□ -1.59
RPN7	YPR108W	BUD8	P41698	603 aa		5.09	□□□□□ -1.59
RPN7	YPR108W	CAF16	P43569	289 aa		5.09	□□□□□ -1.59
RPN7	YPR108W	PRY1	P47032	299 aa		5.09	□□□□□ -1.59
RPN7	YPR108W	TNA1	P53322	534 aa		5.09	□□□□□ -1.59
RPN7	YPR108W	TIM11	P81449	96 aa	Predicted RBP	5.09	□□□□□ -1.59
RPN7	YPR108W	ACS1	Q01574	713 aa		5.09	□□□□□ -1.59
RPN7	YPR108W	TSA2	Q04120	196 aa		5.09	□□□□□ -1.59
RPN7	YPR108W	DPB4	Q04603	196 aa	Known RBP	5.09	□□□□□ -1.59
RPN7	YPR108W	COQ11	Q05892	277 aa		5.09	□□□□□ -1.59
RPN7	YPR108W	CMC2	Q3E7A4	109 aa		5.09	□□□□□ -1.59
RPN7	YPR108W	FAS1	P07149	2051 aa	Known RBP	5.08	□□□□□ -1.6
RPN7	YPR108W	TRP4	P07285	380 aa	Predicted RBP	5.08	□□□□□ -1.6
RPN7	YPR108W	GLC7	P32598	312 aa	Known RBP	5.08	□□□□□ -1.6
RPN7	YPR108W	VAM7	P32912	316 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	MRPL4	P36517	319 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	SLM6	P38343	150 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	CHS7	P38843	316 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	POP2	P39008	433 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	PAC2	P39937	518 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	YEA6	P39953	335 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	SMD3	P43321	101 aa	Known RBP	5.08	□□□□□ -1.6
RPN7	YPR108W	PEF1	P53238	335 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	PCP1	P53259	346 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	VPS28	Q02767	242 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	THI74	Q04083	370 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	YFH1	Q07540	174 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	FCY22	Q12119	530 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	EAF3	Q12432	401 aa		5.08	□□□□□ -1.6
RPN7	YPR108W	LSB5	P25369	354 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	TIP1	P27654	210 aa	Predicted RBP	5.07	□□□□□ -1.6
RPN7	YPR108W	PEX4	P29340	183 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	CLB6	P32943	380 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	YKL162C	P36052	402 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	YND1	P40009	630 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	MCM22	P47167	239 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	SIP18	P50263	79 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	CGR1	P53188	120 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	RPN14	P53196	417 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	SUR7	P54003	302 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	BUD25	P85052	153 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	TMA23	Q03525	211 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	LRS4	Q04087	347 aa	Known RBP	5.07	□□□□□ -1.6
RPN7	YPR108W	HBN1	Q96VH4	193 aa		5.07	□□□□□ -1.6
RPN7	YPR108W	ADH3	P07246	375 aa	Known RBP	5.06	□□□□□ -1.6
RPN7	YPR108W	MOH1	P38191	138 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	TRS20	P38334	175 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	GPI16	P38875	610 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	NOP16	P40007	231 aa	Known RBP	5.06	□□□□□ -1.6
RPN7	YPR108W	PIG2	P40187	538 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	PHB1	P40961	287 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	EGT2	P42835	1041 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	QRI1	P43123	477 aa	Known RBP	5.06	□□□□□ -1.6
RPN7	YPR108W	AGX1	P43567	385 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	YGL117W	P53133	265 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	PDR17	P53844	350 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	YIF1	P53845	314 aa	Known RBP	5.06	□□□□□ -1.6
RPN7	YPR108W	FMP41	P53889	259 aa	Known RBP	5.06	□□□□□ -1.6
RPN7	YPR108W	HEM25	Q07534	307 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	RRT7	Q07829	113 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	RRS1	Q08746	203 aa	Known RBP	5.06	□□□□□ -1.6
RPN7	YPR108W	AIM45	Q12480	344 aa	Known RBP	5.06	□□□□□ -1.6
RPN7	YPR108W	PCC1	Q3E833	88 aa		5.06	□□□□□ -1.6
RPN7	YPR108W	POL2	P21951	2222 aa	Known RBP	5.05	□□□□□ -1.6
RPN7	YPR108W	YDR157W	A0A023PZE8	133 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	IPP1	P00817	287 aa	Known RBP	5.05	□□□□□ -1.6
RPN7	YPR108W	HEM13	P11353	328 aa	Known RBP	5.05	□□□□□ -1.6
RPN7	YPR108W	RPB3	P16370	318 aa	Known RBP	5.05	□□□□□ -1.6
RPN7	YPR108W	SAG1	P20840	650 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	ERV1	P27882	189 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	OCH1	P31755	480 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	EMP24	P32803	203 aa	Known RBP	5.05	□□□□□ -1.6
RPN7	YPR108W	PRS3	P38689	320 aa	Known RBP	5.05	□□□□□ -1.6
RPN7	YPR108W	RMD6	P39975	231 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	YER079W	P40052	210 aa	Known RBP	5.05	□□□□□ -1.6
RPN7	YPR108W	YNL208W	P40159	199 aa	Known RBP	5.05	□□□□□ -1.6
RPN7	YPR108W	TOK1	P40310	691 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	YJR012C	P47087	207 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	YJR056C	P47115	236 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	YJR111C	P47148	283 aa	Known RBP	5.05	□□□□□ -1.6
RPN7	YPR108W	UBP8	P50102	471 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	TAF4	P50105	388 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	HHO1	P53551	258 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	MRPL22	P53881	309 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	ODC1	Q03028	310 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	YJR112W-A	Q3E743	109 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	YPR108W-A	Q3E7B3	70 aa		5.05	□□□□□ -1.6
RPN7	YPR108W	SEC22	P22214	214 aa		5.04	□□□□□ -1.6
RPN7	YPR108W	QCR9	P22289	66 aa		5.04	□□□□□ -1.6
RPN7	YPR108W	CNB1	P25296	175 aa		5.04	□□□□□ -1.6
RPN7	YPR108W	HSP10	P38910	106 aa		5.04	□□□□□ -1.6
RPN7	YPR108W	GTT1	P40582	234 aa		5.04	□□□□□ -1.6
RPN7	YPR108W	GWT1	P47026	490 aa		5.04	□□□□□ -1.6
RPN7	YPR108W	TTI2	P47168	421 aa		5.04	□□□□□ -1.6
RPN7	YPR108W	RIB4	P50861	169 aa	Predicted RBP	5.04	□□□□□ -1.6
RPN7	YPR108W	DLT1	Q04216	342 aa		5.04	□□□□□ -1.6
RPN7	YPR108W	LPP1	Q04396	274 aa		5.04	□□□□□ -1.6
RPN7	YPR108W	PRS5	Q12265	496 aa	Known RBP	5.04	□□□□□ -1.6
RPN7	YPR108W	ATP14	Q12349	124 aa		5.04	□□□□□ -1.6
RPN7	YPR108W	SNU23	Q12368	194 aa	Predicted RBP	5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms