RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	ERP1	Q05359	219 aa	Known RBP	4.98	□□□□□ -1.61
TFB4	YPR056W	NKP2	Q06162	153 aa		4.98	□□□□□ -1.61
TFB4	YPR056W	YOR214C	Q12282	236 aa		4.98	□□□□□ -1.61
TFB4	YPR056W	PDR18	P53756	1333 aa		4.97	□□□□□ -1.61
TFB4	YPR056W	SFC1	P33303	322 aa		4.97	□□□□□ -1.61
TFB4	YPR056W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
TFB4	YPR056W	BUD13	P46947	266 aa	Predicted RBP	4.97	□□□□□ -1.61
TFB4	YPR056W	COF1	Q03048	143 aa	Known RBP	4.97	□□□□□ -1.61
TFB4	YPR056W	IES4	Q08561	116 aa		4.97	□□□□□ -1.61
TFB4	YPR056W	THP3	Q12049	470 aa	Known RBP	4.97	□□□□□ -1.61
TFB4	YPR056W	RTR2	Q12378	196 aa		4.97	□□□□□ -1.61
TFB4	YPR056W	YHR139C-A	O13536	103 aa		4.96	□□□□□ -1.62
TFB4	YPR056W	MBF1	O14467	151 aa	Known RBP	4.96	□□□□□ -1.62
TFB4	YPR056W	DDI2	P0CH63	225 aa		4.96	□□□□□ -1.62
TFB4	YPR056W	DDI3	P0CH64	225 aa		4.96	□□□□□ -1.62
TFB4	YPR056W	YCR025C	P25352	136 aa		4.96	□□□□□ -1.62
TFB4	YPR056W	LHP1	P33399	275 aa	Known RBP	4.96	□□□□□ -1.62
TFB4	YPR056W	PAN3	P36102	679 aa	Predicted RBP	4.96	□□□□□ -1.62
TFB4	YPR056W	AYR1	P40471	297 aa		4.96	□□□□□ -1.62
TFB4	YPR056W	YGR017W	P53210	297 aa		4.96	□□□□□ -1.62
TFB4	YPR056W	YLR177W	Q06251	628 aa		4.96	□□□□□ -1.62
TFB4	YPR056W	YPL278C	Q08990	100 aa		4.96	□□□□□ -1.62
TFB4	YPR056W	PRR2	Q12310	699 aa		4.96	□□□□□ -1.62
TFB4	YPR056W	PSF1	Q12488	208 aa		4.96	□□□□□ -1.62
TFB4	YPR056W	RPC19	P28000	142 aa	Known RBP	4.95	□□□□□ -1.62
TFB4	YPR056W	MIX23	P38162	196 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	POP8	P38208	133 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	MED6	P38782	295 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	OST2	P46964	130 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	ILM1	P47155	203 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	ARO8	P53090	500 aa	Known RBP	4.95	□□□□□ -1.62
TFB4	YPR056W	AAH1	P53909	347 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	RNH201	P53942	307 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	YPL113C	Q02961	396 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	DML1	Q03652	475 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	FSH2	Q05015	223 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	YHC1	Q05900	231 aa	Known RBP	4.95	□□□□□ -1.62
TFB4	YPR056W	ATP16	Q12165	160 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	YOR342C	Q12182	319 aa		4.95	□□□□□ -1.62
TFB4	YPR056W	MPD1	Q12404	318 aa	Known RBP	4.95	□□□□□ -1.62
TFB4	YPR056W	CDC7	P06243	507 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	PHO13	P19881	312 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	MAG1	P22134	296 aa	Known RBP	4.94	□□□□□ -1.62
TFB4	YPR056W	SPO13	P23624	291 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	RSA4	P25382	515 aa	Known RBP	4.94	□□□□□ -1.62
TFB4	YPR056W	STP22	P25604	385 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	CAT5	P41735	233 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	SDS23	P53172	527 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	ORM1	P53224	222 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	YGR050C	P53231	118 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	HHO1	P53551	258 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	PGA1	P53896	198 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	YOR376W	Q08900	122 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	TIR4	Q12218	487 aa	Predicted RBP	4.94	□□□□□ -1.62
TFB4	YPR056W	TSC3	Q3E790	80 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	BUD4	P47136	1447 aa		4.94	□□□□□ -1.62
TFB4	YPR056W	HHF1	P02309	103 aa	Known RBP	4.93	□□□□□ -1.62
TFB4	YPR056W	PHO2	P07269	559 aa		4.93	□□□□□ -1.62
TFB4	YPR056W	CNB1	P25296	175 aa		4.93	□□□□□ -1.62
TFB4	YPR056W	YBL010C	P32788	280 aa		4.93	□□□□□ -1.62
TFB4	YPR056W	EDC2	P40023	145 aa	Predicted RBP	4.93	□□□□□ -1.62
TFB4	YPR056W	YPL073C	P40323	161 aa		4.93	□□□□□ -1.62
TFB4	YPR056W	YJL213W	P40896	331 aa		4.93	□□□□□ -1.62
TFB4	YPR056W	UFD1	P53044	361 aa		4.93	□□□□□ -1.62
TFB4	YPR056W	YNL010W	P53981	241 aa	Known RBP	4.93	□□□□□ -1.62
TFB4	YPR056W	YDR415C	Q04033	374 aa	Predicted RBP	4.93	□□□□□ -1.62
TFB4	YPR056W	YLR099W-A	Q3E798	87 aa		4.93	□□□□□ -1.62
TFB4	YPR056W	YBL008W-A	Q3E821	79 aa		4.93	□□□□□ -1.62
TFB4	YPR056W	YPR014C	Q6B0W2	109 aa		4.93	□□□□□ -1.62
TFB4	YPR056W	SPA2	P23201	1466 aa	Known RBP	4.93	□□□□□ -1.62
TFB4	YPR056W	MRS3	P10566	314 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	RPL30	P14120	105 aa	Known RBP	4.92	□□□□□ -1.62
TFB4	YPR056W	PET9	P18239	318 aa	Known RBP	4.92	□□□□□ -1.62
TFB4	YPR056W	IMP1	P28627	190 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	SCO2	P38072	301 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	CSH1	P38287	376 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	YBR242W	P38331	238 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	SLM2	P53955	656 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	RPL15B	P54780	204 aa	Predicted RBP	4.92	□□□□□ -1.62
TFB4	YPR056W	YDR366C	P87287	132 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	THI74	Q04083	370 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	YDR391C	Q04170	232 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	YTH1	Q06102	208 aa	Predicted RBP	4.92	□□□□□ -1.62
TFB4	YPR056W	ZEO1	Q08245	113 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	YBL112C	Q3E7Y4	105 aa		4.92	□□□□□ -1.62
TFB4	YPR056W	RPL15A	P05748	204 aa	Known RBP	4.91	□□□□□ -1.62
TFB4	YPR056W	LDS1	P31379	325 aa		4.91	□□□□□ -1.62
TFB4	YPR056W	HYM1	P32464	399 aa		4.91	□□□□□ -1.62
TFB4	YPR056W	LSM12	P38828	187 aa	Known RBP	4.91	□□□□□ -1.62
TFB4	YPR056W	DLS1	P40366	167 aa		4.91	□□□□□ -1.62
TFB4	YPR056W	ARP3	P47117	449 aa	Known RBP	4.91	□□□□□ -1.62
TFB4	YPR056W	YGR219W	P53307	113 aa		4.91	□□□□□ -1.62
TFB4	YPR056W	CAB4	P53332	305 aa		4.91	□□□□□ -1.62
TFB4	YPR056W	ADD37	Q03233	198 aa		4.91	□□□□□ -1.62
TFB4	YPR056W	MRX8	Q05473	314 aa		4.91	□□□□□ -1.62
TFB4	YPR056W	FCY1	Q12178	158 aa		4.91	□□□□□ -1.62
TFB4	YPR056W	ADH1	P00330	348 aa	Known RBP	4.9	□□□□□ -1.63
TFB4	YPR056W	PHO85	P17157	305 aa		4.9	□□□□□ -1.63
TFB4	YPR056W	CKS1	P20486	150 aa	Known RBP	4.9	□□□□□ -1.63
TFB4	YPR056W	SMP1	P38128	452 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms