RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C ERV25P54837 211 aaKnown RBP1.5□□□□□ -2.17
ATG11YPR049C YPL067CQ02754 198 aa1.5□□□□□ -2.17
ATG11YPR049C YLR108CQ12259 485 aa1.5□□□□□ -2.17
ATG11YPR049C IES3Q12345 250 aa1.5□□□□□ -2.17
ATG11YPR049C VPH2P32341 215 aa1.5□□□□□ -2.17
ATG11YPR049C ASF2P32448 525 aaPredicted RBP1.5□□□□□ -2.17
ATG11YPR049C GDH2P33327 1092 aaKnown RBP1.5□□□□□ -2.17
ATG11YPR049C UIP3P39547 235 aa1.5□□□□□ -2.17
ATG11YPR049C NOP16P40007 231 aaKnown RBP1.5□□□□□ -2.17
ATG11YPR049C THO1P40040 218 aaKnown RBP1.5□□□□□ -2.17
ATG11YPR049C PDS1P40316 373 aaPredicted RBP1.5□□□□□ -2.17
ATG11YPR049C LSM1P47017 172 aaKnown RBP1.5□□□□□ -2.17
ATG11YPR049C UPF3P48412 387 aaKnown RBP1.5□□□□□ -2.17
ATG11YPR049C VMA10P48836 114 aaKnown RBP1.5□□□□□ -2.17
ATG11YPR049C PMT5P52867 743 aa1.5□□□□□ -2.17
ATG11YPR049C CWC25P53854 179 aaKnown RBP1.5□□□□□ -2.17
ATG11YPR049C PHO92Q06390 306 aa1.5□□□□□ -2.17
ATG11YPR049C SNX3Q08826 162 aaKnown RBP1.5□□□□□ -2.17
ATG11YPR049C ATP16Q12165 160 aa1.5□□□□□ -2.17
ATG11YPR049C AGA1P32323 725 aa1.49□□□□□ -2.17
ATG11YPR049C SUA5P32579 426 aa1.49□□□□□ -2.17
ATG11YPR049C DAD2P36162 133 aa1.49□□□□□ -2.17
ATG11YPR049C YGR042WP53227 271 aa1.49□□□□□ -2.17
ATG11YPR049C CRH1P53301 507 aa1.49□□□□□ -2.17
ATG11YPR049C SRL4Q03085 281 aa1.49□□□□□ -2.17
ATG11YPR049C YHC1Q05900 231 aaKnown RBP1.49□□□□□ -2.17
ATG11YPR049C RPL24AP04449 155 aaKnown RBP1.49□□□□□ -2.17
ATG11YPR049C ALK2P32789 676 aaPredicted RBP1.49□□□□□ -2.17
ATG11YPR049C MCH2P36032 473 aa1.49□□□□□ -2.17
ATG11YPR049C YKR015CP36111 568 aa1.49□□□□□ -2.17
ATG11YPR049C HXT14P42833 540 aa1.49□□□□□ -2.17
ATG11YPR049C SWP82P43554 623 aa1.49□□□□□ -2.17
ATG11YPR049C PIR5P46999 287 aa1.49□□□□□ -2.17
ATG11YPR049C PUS4P48567 403 aaKnown RBP1.49□□□□□ -2.17
ATG11YPR049C APT1P49435 187 aaKnown RBP1.49□□□□□ -2.17
ATG11YPR049C CAF40P53829 373 aa1.49□□□□□ -2.17
ATG11YPR049C CUS2P53830 285 aaPredicted RBP1.49□□□□□ -2.17
ATG11YPR049C RNH201P53942 307 aa1.49□□□□□ -2.17
ATG11YPR049C DML1Q03652 475 aa1.49□□□□□ -2.17
ATG11YPR049C NSL1Q12143 216 aa1.49□□□□□ -2.17
ATG11YPR049C RBD2Q12270 262 aa1.49□□□□□ -2.17
ATG11YPR049C COX5BP00425 151 aa1.49□□□□□ -2.17
ATG11YPR049C RPL27AP0C2H6 136 aaKnown RBP1.49□□□□□ -2.17
ATG11YPR049C RPL27BP0C2H7 136 aaKnown RBP1.49□□□□□ -2.17
ATG11YPR049C TAL1P15019 335 aaKnown RBP1.49□□□□□ -2.17
ATG11YPR049C RRP7P25368 297 aaPredicted RBP1.49□□□□□ -2.17
ATG11YPR049C ATG22P25568 528 aa1.49□□□□□ -2.17
ATG11YPR049C YBR242WP38331 238 aa1.49□□□□□ -2.17
ATG11YPR049C BIG1P38813 335 aa1.49□□□□□ -2.17
ATG11YPR049C FMC1P40491 155 aa1.49□□□□□ -2.17
ATG11YPR049C NAS2P40555 220 aa1.49□□□□□ -2.17
ATG11YPR049C TMA22P47089 198 aaPredicted RBP1.49□□□□□ -2.17
ATG11YPR049C MRPS17Q03246 237 aaPredicted RBP1.49□□□□□ -2.17
ATG11YPR049C IRC25Q07951 179 aa1.49□□□□□ -2.17
ATG11YPR049C SPC3Q12133 184 aa1.49□□□□□ -2.17
ATG11YPR049C QCR7P00128 127 aa1.48□□□□□ -2.17
ATG11YPR049C CKA1P15790 372 aa1.48□□□□□ -2.17
ATG11YPR049C MDH1P17505 334 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
ATG11YPR049C HYM1P32464 399 aa1.48□□□□□ -2.17
ATG11YPR049C SRP102P36057 244 aaPredicted RBP1.48□□□□□ -2.17
ATG11YPR049C SEC72P39742 193 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C PHM8P40025 321 aa1.48□□□□□ -2.17
ATG11YPR049C YJL218WP40892 196 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C HAC1P41546 238 aa1.48□□□□□ -2.17
ATG11YPR049C HRT1Q08273 121 aa1.48□□□□□ -2.17
ATG11YPR049C SNF8Q12483 233 aa1.48□□□□□ -2.17
ATG11YPR049C TAR1Q8TGM6 124 aa1.48□□□□□ -2.17
ATG11YPR049C RAD7P06779 565 aa1.48□□□□□ -2.17
ATG11YPR049C DBP3P20447 523 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C OLE1P21147 510 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C ACP1P32463 125 aa1.48□□□□□ -2.17
ATG11YPR049C VAM7P32912 316 aa1.48□□□□□ -2.17
ATG11YPR049C IPT1P38954 527 aa1.48□□□□□ -2.17
ATG11YPR049C MSO1P53604 210 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C RTT103Q05543 409 aa1.48□□□□□ -2.17
ATG11YPR049C PEX10Q05568 337 aa1.48□□□□□ -2.17
ATG11YPR049C YLR031WQ07978 186 aa1.48□□□□□ -2.17
ATG11YPR049C AEP3Q12089 606 aa1.48□□□□□ -2.17
ATG11YPR049C QCR2P07257 368 aa1.48□□□□□ -2.17
ATG11YPR049C NHP6AP11632 93 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C GRX2P17695 143 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C RNA14P25298 677 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C PEX32P38292 413 aa1.48□□□□□ -2.17
ATG11YPR049C RGI1P40043 161 aaPredicted RBP1.48□□□□□ -2.17
ATG11YPR049C YNR048WP53740 393 aa1.48□□□□□ -2.17
ATG11YPR049C DIG2Q03373 323 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C YLR173WQ06247 608 aa1.48□□□□□ -2.17
ATG11YPR049C DTD1Q07648 150 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C DCI1Q08558 271 aa1.48□□□□□ -2.17
ATG11YPR049C YPL225WQ08971 146 aaKnown RBP1.48□□□□□ -2.17
ATG11YPR049C NCA2Q12374 616 aa1.48□□□□□ -2.17
ATG11YPR049C NHP6BP11633 99 aaKnown RBP1.47□□□□□ -2.17
ATG11YPR049C ECT1P33412 323 aa1.47□□□□□ -2.17
ATG11YPR049C MED8P38304 223 aa1.47□□□□□ -2.17
ATG11YPR049C LIN1P38852 340 aaPredicted RBP1.47□□□□□ -2.17
ATG11YPR049C YER137CP40083 148 aaKnown RBP1.47□□□□□ -2.17
ATG11YPR049C RFC2P40348 353 aa1.47□□□□□ -2.17
ATG11YPR049C BMT5P40493 336 aa1.47□□□□□ -2.17
ATG11YPR049C GVP36P40531 326 aaKnown RBP1.47□□□□□ -2.17
ATG11YPR049C AGP3P43548 558 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms