RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W NUS1Q12063 375 aa3.25□□□□□ -1.89
SWI1YPL016W YLR415CO13578 112 aa3.25□□□□□ -1.89
SWI1YPL016W SCO1P23833 295 aa3.25□□□□□ -1.89
SWI1YPL016W SEC17P32602 292 aa3.25□□□□□ -1.89
SWI1YPL016W UBS1P38290 277 aa3.25□□□□□ -1.89
SWI1YPL016W PMT3P47190 753 aa3.25□□□□□ -1.89
SWI1YPL016W EMC4P53073 190 aa3.25□□□□□ -1.89
SWI1YPL016W MTQ2Q03920 221 aaPredicted RBP3.25□□□□□ -1.89
SWI1YPL016W BTS1Q12051 335 aa3.25□□□□□ -1.89
SWI1YPL016W PCL9Q12477 304 aa3.25□□□□□ -1.89
SWI1YPL016W YCR024C-BQ3E7Z8 88 aa3.25□□□□□ -1.89
SWI1YPL016W HAP3P13434 144 aa3.24□□□□□ -1.89
SWI1YPL016W SEC11P15367 167 aa3.24□□□□□ -1.89
SWI1YPL016W PMU1P36069 295 aa3.24□□□□□ -1.89
SWI1YPL016W ECM33P38248 429 aaKnown RBP3.24□□□□□ -1.89
SWI1YPL016W YIL165CP40446 119 aa3.24□□□□□ -1.89
SWI1YPL016W YGR015CP53208 328 aa3.24□□□□□ -1.89
SWI1YPL016W YNL092WP53934 400 aa3.24□□□□□ -1.89
SWI1YPL016W HPT1Q04178 221 aaKnown RBP3.24□□□□□ -1.89
SWI1YPL016W MSA1Q08471 629 aa3.24□□□□□ -1.89
SWI1YPL016W YOR015WQ12169 119 aa3.24□□□□□ -1.89
SWI1YPL016W ATO3Q12359 275 aa3.24□□□□□ -1.89
SWI1YPL016W CUE1P38428 203 aa3.24□□□□□ -1.89
SWI1YPL016W YNL208WP40159 199 aaKnown RBP3.24□□□□□ -1.89
SWI1YPL016W YFL054CP43549 646 aa3.24□□□□□ -1.89
SWI1YPL016W ELP4Q02884 456 aaKnown RBP3.24□□□□□ -1.89
SWI1YPL016W DIG2Q03373 323 aaKnown RBP3.24□□□□□ -1.89
SWI1YPL016W ADH6Q04894 360 aaKnown RBP3.24□□□□□ -1.89
SWI1YPL016W RPS31P05759 152 aaKnown RBP3.24□□□□□ -1.89
SWI1YPL016W UBI4P0CG63 381 aaKnown RBP3.24□□□□□ -1.89
SWI1YPL016W RPL40AP0CH08 128 aaKnown RBP3.24□□□□□ -1.89
SWI1YPL016W RPL40BP0CH09 128 aaKnown RBP3.24□□□□□ -1.89
SWI1YPL016W FET4P40988 552 aa3.24□□□□□ -1.89
SWI1YPL016W SSU72P53538 206 aaPredicted RBP3.24□□□□□ -1.89
SWI1YPL016W YNL260CP53846 198 aa3.24□□□□□ -1.89
SWI1YPL016W IES4Q08561 116 aa3.24□□□□□ -1.89
SWI1YPL016W RDR1Q08904 546 aa3.24□□□□□ -1.89
SWI1YPL016W QCR2P07257 368 aa3.23□□□□□ -1.89
SWI1YPL016W YLL053CP0CD98 152 aa3.23□□□□□ -1.89
SWI1YPL016W ADK2P26364 225 aa3.23□□□□□ -1.89
SWI1YPL016W ARO4P32449 370 aaKnown RBP3.23□□□□□ -1.89
SWI1YPL016W PAU24P38155 120 aa3.23□□□□□ -1.89
SWI1YPL016W INM1P38710 295 aa3.23□□□□□ -1.89
SWI1YPL016W PEX7P39108 375 aa3.23□□□□□ -1.89
SWI1YPL016W CCS1P40202 249 aaKnown RBP3.23□□□□□ -1.89
SWI1YPL016W YFR020WP43600 232 aa3.23□□□□□ -1.89
SWI1YPL016W BNA2P47125 453 aa3.23□□□□□ -1.89
SWI1YPL016W YGR017WP53210 297 aa3.23□□□□□ -1.89
SWI1YPL016W THG1P53215 237 aaKnown RBP3.23□□□□□ -1.89
SWI1YPL016W APJ1P53940 528 aa3.23□□□□□ -1.89
SWI1YPL016W NUP53Q03790 475 aa3.23□□□□□ -1.89
SWI1YPL016W YMR130WQ04223 302 aa3.23□□□□□ -1.89
SWI1YPL016W PAM18Q07914 168 aa3.23□□□□□ -1.89
SWI1YPL016W YLR040CQ07988 224 aa3.23□□□□□ -1.89
SWI1YPL016W YOL024WQ08172 172 aa3.23□□□□□ -1.89
SWI1YPL016W CSR2Q12734 1121 aa3.23□□□□□ -1.89
SWI1YPL016W COA2Q3E823 68 aa3.23□□□□□ -1.89
SWI1YPL016W PAN3P36102 679 aaPredicted RBP3.23□□□□□ -1.89
SWI1YPL016W MTM1P53320 366 aa3.23□□□□□ -1.89
SWI1YPL016W YNL165WP53891 406 aa3.23□□□□□ -1.89
SWI1YPL016W HSP33Q08914 237 aaKnown RBP3.23□□□□□ -1.89
SWI1YPL016W IDH2P28241 369 aaKnown RBP3.23□□□□□ -1.89
SWI1YPL016W VID24P38263 362 aa3.23□□□□□ -1.89
SWI1YPL016W SUN4P53616 420 aa3.23□□□□□ -1.89
SWI1YPL016W YLR455WQ06188 304 aa3.23□□□□□ -1.89
SWI1YPL016W PAU23Q07987 124 aa3.23□□□□□ -1.89
SWI1YPL016W PAU17Q12370 124 aa3.23□□□□□ -1.89
SWI1YPL016W RPL13AQ12690 199 aaPredicted RBP3.23□□□□□ -1.89
SWI1YPL016W YER190C-BP0CX94 160 aa3.22□□□□□ -1.89
SWI1YPL016W YEL077W-AP0CX95 160 aa3.22□□□□□ -1.89
SWI1YPL016W YGR296C-BP0CX96 160 aa3.22□□□□□ -1.89
SWI1YPL016W YPL283W-BP0CX97 160 aa3.22□□□□□ -1.89
SWI1YPL016W YPR204C-AP0CX98 160 aa3.22□□□□□ -1.89
SWI1YPL016W SAC7P17121 654 aa3.22□□□□□ -1.89
SWI1YPL016W NPR1P22211 790 aa3.22□□□□□ -1.89
SWI1YPL016W EMP70P32802 667 aa3.22□□□□□ -1.89
SWI1YPL016W SNF11P38956 169 aa3.22□□□□□ -1.89
SWI1YPL016W YEL028WP39989 153 aa3.22□□□□□ -1.89
SWI1YPL016W PRE5P40302 234 aaKnown RBP3.22□□□□□ -1.89
SWI1YPL016W PHS1P40857 217 aa3.22□□□□□ -1.89
SWI1YPL016W VHT1P53241 593 aa3.22□□□□□ -1.89
SWI1YPL016W BIO5P53744 561 aaKnown RBP3.22□□□□□ -1.89
SWI1YPL016W IBD2P53892 351 aa3.22□□□□□ -1.89
SWI1YPL016W YCT1Q12235 531 aa3.22□□□□□ -1.89
SWI1YPL016W YOR304C-AO14468 76 aa3.22□□□□□ -1.89
SWI1YPL016W TRR1P29509 319 aaKnown RBP3.22□□□□□ -1.89
SWI1YPL016W YPS6P40583 537 aa3.22□□□□□ -1.89
SWI1YPL016W YJR124CP47159 448 aa3.22□□□□□ -1.89
SWI1YPL016W ALG13P53178 202 aa3.22□□□□□ -1.89
SWI1YPL016W DUG3P53871 357 aa3.22□□□□□ -1.89
SWI1YPL016W RNH201P53942 307 aa3.22□□□□□ -1.89
SWI1YPL016W API2Q04413 109 aa3.22□□□□□ -1.89
SWI1YPL016W ENB1Q08299 606 aa3.22□□□□□ -1.89
SWI1YPL016W YDR461C-AQ2V2P7 80 aa3.22□□□□□ -1.89
SWI1YPL016W DET1Q99288 334 aaKnown RBP3.22□□□□□ -1.89
SWI1YPL016W VAR1P02381 398 aa3.22□□□□□ -1.89
SWI1YPL016W MKK2P32491 506 aa3.22□□□□□ -1.89
SWI1YPL016W YIP1P53039 248 aa3.22□□□□□ -1.89
SWI1YPL016W DYN2Q02647 92 aa3.22□□□□□ -1.89
SWI1YPL016W TMA23Q03525 211 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms