RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C TDA8Q6B2U8 126 aa1.11□□□□□ -2.23
SWT1YOR166C NCB2Q92317 146 aa1.11□□□□□ -2.23
SWT1YOR166C CDC28P00546 298 aaKnown RBP1.1□□□□□ -2.23
SWT1YOR166C GCN3P14741 305 aa1.1□□□□□ -2.23
SWT1YOR166C COQ1P18900 473 aa1.1□□□□□ -2.23
SWT1YOR166C FPR1P20081 114 aaKnown RBP1.1□□□□□ -2.23
SWT1YOR166C BET1P22804 142 aa1.1□□□□□ -2.23
SWT1YOR166C NTG1P31378 399 aa1.1□□□□□ -2.23
SWT1YOR166C TVP38P36164 337 aa1.1□□□□□ -2.23
SWT1YOR166C UMP1P38293 148 aa1.1□□□□□ -2.23
SWT1YOR166C IRC18P47056 224 aa1.1□□□□□ -2.23
SWT1YOR166C YNL010WP53981 241 aaKnown RBP1.1□□□□□ -2.23
SWT1YOR166C YMR226CQ05016 267 aaKnown RBP1.1□□□□□ -2.23
SWT1YOR166C MSA1Q08471 629 aa1.1□□□□□ -2.23
SWT1YOR166C RHO1P06780 209 aaKnown RBP1.09□□□□□ -2.23
SWT1YOR166C QCR8P08525 94 aa1.09□□□□□ -2.23
SWT1YOR166C DDI2P0CH63 225 aa1.09□□□□□ -2.23
SWT1YOR166C DDI3P0CH64 225 aa1.09□□□□□ -2.23
SWT1YOR166C GPA2P10823 449 aa1.09□□□□□ -2.23
SWT1YOR166C MEI4P29467 408 aa1.09□□□□□ -2.23
SWT1YOR166C FZF1P32805 299 aa1.09□□□□□ -2.23
SWT1YOR166C RPL13BP40212 199 aaKnown RBP1.09□□□□□ -2.23
SWT1YOR166C GAS3Q03655 524 aa1.09□□□□□ -2.23
SWT1YOR166C GGA1Q06336 557 aa1.09□□□□□ -2.23
SWT1YOR166C PSF1Q12488 208 aa1.09□□□□□ -2.23
SWT1YOR166C RPL13AQ12690 199 aaPredicted RBP1.09□□□□□ -2.23
SWT1YOR166C YLR156WP0CE96 114 aa1.08□□□□□ -2.24
SWT1YOR166C YLR159WP0CE97 114 aa1.08□□□□□ -2.24
SWT1YOR166C YLR161WP0CE98 114 aa1.08□□□□□ -2.24
SWT1YOR166C KSS1P14681 368 aa1.08□□□□□ -2.24
SWT1YOR166C YGL010WP25338 174 aa1.08□□□□□ -2.24
SWT1YOR166C PBN1P25580 416 aa1.08□□□□□ -2.24
SWT1YOR166C RPT5P33297 434 aaKnown RBP1.08□□□□□ -2.24
SWT1YOR166C NTF2P33331 125 aaKnown RBP1.08□□□□□ -2.24
SWT1YOR166C YHR180WP38868 163 aa1.08□□□□□ -2.24
SWT1YOR166C FCY21P40039 528 aa1.08□□□□□ -2.24
SWT1YOR166C GVP36P40531 326 aaKnown RBP1.08□□□□□ -2.24
SWT1YOR166C GCN20P43535 752 aaKnown RBP1.08□□□□□ -2.24
SWT1YOR166C ERJ5P43613 295 aaPredicted RBP1.08□□□□□ -2.24
SWT1YOR166C RPA43P46669 326 aa1.08□□□□□ -2.24
SWT1YOR166C ADO1P47143 340 aaKnown RBP1.08□□□□□ -2.24
SWT1YOR166C YJR149WP47177 404 aa1.08□□□□□ -2.24
SWT1YOR166C SWP1Q02795 286 aa1.08□□□□□ -2.24
SWT1YOR166C DBF2P22204 572 aa1.08□□□□□ -2.24
SWT1YOR166C EHD3P28817 500 aa1.08□□□□□ -2.24
SWT1YOR166C PRP18P33411 251 aaPredicted RBP1.08□□□□□ -2.24
SWT1YOR166C YBR285WP38354 144 aa1.08□□□□□ -2.24
SWT1YOR166C TVP23P38962 199 aa1.08□□□□□ -2.24
SWT1YOR166C SMD3P43321 101 aaKnown RBP1.08□□□□□ -2.24
SWT1YOR166C OTU1P43558 301 aa1.08□□□□□ -2.24
SWT1YOR166C ALG13P53178 202 aa1.08□□□□□ -2.24
SWT1YOR166C CUS2P53830 285 aaPredicted RBP1.08□□□□□ -2.24
SWT1YOR166C MRPS17Q03246 237 aaPredicted RBP1.08□□□□□ -2.24
SWT1YOR166C CUE4Q04201 117 aaPredicted RBP1.08□□□□□ -2.24
SWT1YOR166C YHR007C-AQ07074 71 aa1.08□□□□□ -2.24
SWT1YOR166C RPL27BP0C2H7 136 aaKnown RBP1.07□□□□□ -2.24
SWT1YOR166C MAG1P22134 296 aaKnown RBP1.07□□□□□ -2.24
SWT1YOR166C RPS5P26783 225 aaKnown RBP1.07□□□□□ -2.24
SWT1YOR166C CBT1P36038 271 aaPredicted RBP1.07□□□□□ -2.24
SWT1YOR166C URA8P38627 578 aaPredicted RBP1.07□□□□□ -2.24
SWT1YOR166C CTR2P38865 189 aa1.07□□□□□ -2.24
SWT1YOR166C IRC22P40006 225 aa1.07□□□□□ -2.24
SWT1YOR166C GLE2P40066 365 aa1.07□□□□□ -2.24
SWT1YOR166C PGA2P53903 129 aa1.07□□□□□ -2.24
SWT1YOR166C GRX5Q02784 150 aa1.07□□□□□ -2.24
SWT1YOR166C CWC21Q03375 135 aaKnown RBP1.07□□□□□ -2.24
SWT1YOR166C ANT1Q06497 328 aa1.07□□□□□ -2.24
SWT1YOR166C CSI2Q08054 341 aa1.07□□□□□ -2.24
SWT1YOR166C GPM2Q12008 311 aa1.07□□□□□ -2.24
SWT1YOR166C RIO1Q12196 484 aaKnown RBP1.07□□□□□ -2.24
SWT1YOR166C TIM9O74700 87 aa1.06□□□□□ -2.24
SWT1YOR166C RAS2P01120 322 aaKnown RBP1.06□□□□□ -2.24
SWT1YOR166C REP2P03872 296 aa1.06□□□□□ -2.24
SWT1YOR166C RPB4P20433 221 aaPredicted RBP1.06□□□□□ -2.24
SWT1YOR166C RPO26P20435 155 aa1.06□□□□□ -2.24
SWT1YOR166C MRPL17P36528 281 aa1.06□□□□□ -2.24
SWT1YOR166C HMF1P40037 129 aaKnown RBP1.06□□□□□ -2.24
SWT1YOR166C MSS2P40990 351 aa1.06□□□□□ -2.24
SWT1YOR166C RAD17P48581 401 aa1.06□□□□□ -2.24
SWT1YOR166C PDR17P53844 350 aa1.06□□□□□ -2.24
SWT1YOR166C YMR295CQ03559 197 aa1.06□□□□□ -2.24
SWT1YOR166C YCR090CP25654 182 aaKnown RBP1.05□□□□□ -2.24
SWT1YOR166C GAA1P39012 614 aa1.05□□□□□ -2.24
SWT1YOR166C ERG28P40030 148 aa1.05□□□□□ -2.24
SWT1YOR166C YER135CP40082 130 aa1.05□□□□□ -2.24
SWT1YOR166C YNL194CP40169 301 aa1.05□□□□□ -2.24
SWT1YOR166C BOL2P53082 120 aa1.05□□□□□ -2.24
SWT1YOR166C YDR274CP87283 123 aa1.05□□□□□ -2.24
SWT1YOR166C RCE1Q03530 315 aa1.05□□□□□ -2.24
SWT1YOR166C IKI3Q06706 1349 aaKnown RBP1.04□□□□□ -2.24
SWT1YOR166C SHE2P36068 246 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
SWT1YOR166C YBR220CP38318 560 aa1.04□□□□□ -2.24
SWT1YOR166C SIP3P38717 1229 aa1.04□□□□□ -2.24
SWT1YOR166C GET1P53192 235 aa1.04□□□□□ -2.24
SWT1YOR166C HNT1Q04344 158 aaKnown RBP1.04□□□□□ -2.24
SWT1YOR166C SPG3Q04398 127 aaPredicted RBP1.04□□□□□ -2.24
SWT1YOR166C YPR174CQ06616 221 aaPredicted RBP1.04□□□□□ -2.24
SWT1YOR166C YLR036CQ07986 203 aa1.04□□□□□ -2.24
SWT1YOR166C ATG40Q99325 256 aa1.04□□□□□ -2.24
SWT1YOR166C CPA1P07258 411 aaKnown RBP1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms