RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W YHR032W-AP0C5N6 59 aa1.75□□□□□ -2.13
PEP12YOR036W CLB6P32943 380 aa1.75□□□□□ -2.13
PEP12YOR036W RPL9BP51401 191 aaKnown RBP1.75□□□□□ -2.13
PEP12YOR036W MMS2P53152 137 aa1.75□□□□□ -2.13
PEP12YOR036W EFM5P53200 248 aaKnown RBP1.75□□□□□ -2.13
PEP12YOR036W YGR050CP53231 118 aa1.75□□□□□ -2.13
PEP12YOR036W LSM7P53905 115 aaKnown RBP1.75□□□□□ -2.13
PEP12YOR036W PET191Q02772 108 aa1.75□□□□□ -2.13
PEP12YOR036W GGA1Q06336 557 aa1.75□□□□□ -2.13
PEP12YOR036W GPM2Q12008 311 aa1.75□□□□□ -2.13
PEP12YOR036W VPS68Q12016 184 aa1.75□□□□□ -2.13
PEP12YOR036W PSF1Q12488 208 aa1.75□□□□□ -2.13
PEP12YOR036W REP2P03872 296 aa1.74□□□□□ -2.13
PEP12YOR036W CDC7P06243 507 aa1.74□□□□□ -2.13
PEP12YOR036W YPR170W-BP0C5R9 85 aa1.74□□□□□ -2.13
PEP12YOR036W SEC17P32602 292 aa1.74□□□□□ -2.13
PEP12YOR036W VPS51P36116 164 aa1.74□□□□□ -2.13
PEP12YOR036W POP4P38336 279 aa1.74□□□□□ -2.13
PEP12YOR036W SNX4P47057 423 aa1.74□□□□□ -2.13
PEP12YOR036W TRM12Q04235 462 aa1.74□□□□□ -2.13
PEP12YOR036W FUS2Q05670 677 aa1.74□□□□□ -2.13
PEP12YOR036W ARR2Q06597 130 aa1.74□□□□□ -2.13
PEP12YOR036W YNG1Q08465 219 aa1.74□□□□□ -2.13
PEP12YOR036W CDC8P00572 216 aa1.73□□□□□ -2.13
PEP12YOR036W MAG1P22134 296 aaKnown RBP1.73□□□□□ -2.13
PEP12YOR036W ATG22P25568 528 aa1.73□□□□□ -2.13
PEP12YOR036W COS6P53344 381 aa1.73□□□□□ -2.13
PEP12YOR036W COG5P53951 403 aa1.73□□□□□ -2.13
PEP12YOR036W USB1Q12208 290 aaKnown RBP1.73□□□□□ -2.13
PEP12YOR036W TDA8Q6B2U8 126 aa1.73□□□□□ -2.13
PEP12YOR036W RPL25P04456 142 aaKnown RBP1.72□□□□□ -2.13
PEP12YOR036W YLR156WP0CE96 114 aa1.72□□□□□ -2.13
PEP12YOR036W YLR159WP0CE97 114 aa1.72□□□□□ -2.13
PEP12YOR036W YLR161WP0CE98 114 aa1.72□□□□□ -2.13
PEP12YOR036W FBA1P14540 359 aaKnown RBP1.72□□□□□ -2.13
PEP12YOR036W SNF6P18888 332 aa1.72□□□□□ -2.13
PEP12YOR036W PTM1P32857 523 aa1.72□□□□□ -2.13
PEP12YOR036W UTP30P36144 274 aaKnown RBP1.72□□□□□ -2.13
PEP12YOR036W RMD6P39975 231 aa1.72□□□□□ -2.13
PEP12YOR036W HMF1P40037 129 aaKnown RBP1.72□□□□□ -2.13
PEP12YOR036W ERG10P41338 398 aaKnown RBP1.72□□□□□ -2.13
PEP12YOR036W PRM10P42946 383 aa1.72□□□□□ -2.13
PEP12YOR036W SLM2P53955 656 aa1.72□□□□□ -2.13
PEP12YOR036W PRM15Q03262 622 aa1.72□□□□□ -2.13
PEP12YOR036W GAS3Q03655 524 aa1.72□□□□□ -2.13
PEP12YOR036W YDR249CQ03787 373 aa1.72□□□□□ -2.13
PEP12YOR036W GRE1Q08969 168 aa1.72□□□□□ -2.13
PEP12YOR036W MDM32Q12171 622 aa1.72□□□□□ -2.13
PEP12YOR036W MSW1P04803 379 aa1.71□□□□□ -2.14
PEP12YOR036W MRS1P07266 363 aa1.71□□□□□ -2.14
PEP12YOR036W PUT1P09368 476 aa1.71□□□□□ -2.14
PEP12YOR036W RPL35AP0CX84 120 aaKnown RBP1.71□□□□□ -2.14
PEP12YOR036W RPL35BP0CX85 120 aaKnown RBP1.71□□□□□ -2.14
PEP12YOR036W UTR5P32630 166 aa1.71□□□□□ -2.14
PEP12YOR036W VMA11P32842 164 aa1.71□□□□□ -2.14
PEP12YOR036W MED6P38782 295 aa1.71□□□□□ -2.14
PEP12YOR036W YHR180WP38868 163 aa1.71□□□□□ -2.14
PEP12YOR036W POG1P40473 351 aa1.71□□□□□ -2.14
PEP12YOR036W MNN5P46982 586 aa1.71□□□□□ -2.14
PEP12YOR036W DSK2P48510 373 aa1.71□□□□□ -2.14
PEP12YOR036W MIX17Q03667 156 aa1.71□□□□□ -2.14
PEP12YOR036W ARO80Q04052 950 aa1.71□□□□□ -2.14
PEP12YOR036W NEJ1Q06148 342 aa1.71□□□□□ -2.14
PEP12YOR036W SUE1Q06524 206 aa1.71□□□□□ -2.14
PEP12YOR036W RDS3Q06835 107 aaPredicted RBP1.71□□□□□ -2.14
PEP12YOR036W YPL162CQ12042 273 aa1.71□□□□□ -2.14
PEP12YOR036W MCP1Q12106 302 aa1.71□□□□□ -2.14
PEP12YOR036W EMC6Q12431 108 aa1.71□□□□□ -2.14
PEP12YOR036W MHT1Q12525 324 aa1.71□□□□□ -2.14
PEP12YOR036W YHR214C-EQ8TGK0 99 aa1.71□□□□□ -2.14
PEP12YOR036W CNB1P25296 175 aa1.7□□□□□ -2.14
PEP12YOR036W MEI4P29467 408 aa1.7□□□□□ -2.14
PEP12YOR036W YOR062CP36025 268 aa1.7□□□□□ -2.14
PEP12YOR036W CAF4P36130 643 aa1.7□□□□□ -2.14
PEP12YOR036W SHG1P38337 142 aa1.7□□□□□ -2.14
PEP12YOR036W SRP14P38985 146 aa1.7□□□□□ -2.14
PEP12YOR036W AST2P39945 430 aaKnown RBP1.7□□□□□ -2.14
PEP12YOR036W AIM25P47140 327 aa1.7□□□□□ -2.14
PEP12YOR036W YIP3P53633 176 aa1.7□□□□□ -2.14
PEP12YOR036W RTC4P53850 401 aa1.7□□□□□ -2.14
PEP12YOR036W DAD3P69850 94 aa1.7□□□□□ -2.14
PEP12YOR036W SWP1Q02795 286 aa1.7□□□□□ -2.14
PEP12YOR036W YET3Q07451 203 aa1.7□□□□□ -2.14
PEP12YOR036W YOL160WQ08321 113 aa1.7□□□□□ -2.14
PEP12YOR036W SIR2P06700 562 aa1.69□□□□□ -2.14
PEP12YOR036W MDH3P32419 343 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
PEP12YOR036W SKG1P36169 355 aa1.69□□□□□ -2.14
PEP12YOR036W UBC12P52491 188 aa1.69□□□□□ -2.14
PEP12YOR036W AIF1P52923 378 aa1.69□□□□□ -2.14
PEP12YOR036W YNL184CP53876 108 aa1.69□□□□□ -2.14
PEP12YOR036W CGI121Q03705 181 aaKnown RBP1.69□□□□□ -2.14
PEP12YOR036W TSC3Q3E790 80 aa1.69□□□□□ -2.14
PEP12YOR036W YFR032C-BQ8TGU2 87 aa1.69□□□□□ -2.14
PEP12YOR036W URA5P13298 226 aaKnown RBP1.68□□□□□ -2.14
PEP12YOR036W RPB3P16370 318 aaKnown RBP1.68□□□□□ -2.14
PEP12YOR036W PET9P18239 318 aaKnown RBP1.68□□□□□ -2.14
PEP12YOR036W BET1P22804 142 aa1.68□□□□□ -2.14
PEP12YOR036W MRPL17P36528 281 aa1.68□□□□□ -2.14
PEP12YOR036W MTW1P39731 289 aa1.68□□□□□ -2.14
PEP12YOR036W YGR219WP53307 113 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms