RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C CRC1Q12289 327 aa3.26□□□□□ -1.89
CIT1YNR001C HMS1Q12398 434 aa3.26□□□□□ -1.89
CIT1YNR001C MRX4Q12467 430 aa3.26□□□□□ -1.89
CIT1YNR001C RPL13AQ12690 199 aaPredicted RBP3.26□□□□□ -1.89
CIT1YNR001C YPL119C-AQ3E751 87 aa3.26□□□□□ -1.89
CIT1YNR001C YKL183C-AQ3E765 70 aa3.26□□□□□ -1.89
CIT1YNR001C PCC1Q3E833 88 aa3.26□□□□□ -1.89
CIT1YNR001C YCL012CQ8J0M4 134 aa3.26□□□□□ -1.89
CIT1YNR001C YCL001W-BQ96VH2 84 aa3.26□□□□□ -1.89
CIT1YNR001C ACC1Q00955 2233 aaKnown RBP3.26□□□□□ -1.89
CIT1YNR001C CDC28P00546 298 aaKnown RBP3.25□□□□□ -1.89
CIT1YNR001C RPL28P02406 149 aaKnown RBP3.25□□□□□ -1.89
CIT1YNR001C HSP26P15992 214 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
CIT1YNR001C MRPL44P19956 98 aa3.25□□□□□ -1.89
CIT1YNR001C MRP17P28778 131 aa3.25□□□□□ -1.89
CIT1YNR001C SPT4P32914 102 aaPredicted RBP3.25□□□□□ -1.89
CIT1YNR001C MCH2P36032 473 aa3.25□□□□□ -1.89
CIT1YNR001C AVT5P38176 459 aa3.25□□□□□ -1.89
CIT1YNR001C GCV3P39726 170 aaPredicted RBP3.25□□□□□ -1.89
CIT1YNR001C PRE6P40303 254 aaKnown RBP3.25□□□□□ -1.89
CIT1YNR001C YIR016WP40572 265 aa3.25□□□□□ -1.89
CIT1YNR001C YJL218WP40892 196 aaKnown RBP3.25□□□□□ -1.89
CIT1YNR001C OST1P41543 476 aaKnown RBP3.25□□□□□ -1.89
CIT1YNR001C GLC8P41818 229 aa3.25□□□□□ -1.89
CIT1YNR001C PFS2P42841 465 aaKnown RBP3.25□□□□□ -1.89
CIT1YNR001C SNN1P48232 102 aa3.25□□□□□ -1.89
CIT1YNR001C COG7P53195 279 aa3.25□□□□□ -1.89
CIT1YNR001C SSU72P53538 206 aaPredicted RBP3.25□□□□□ -1.89
CIT1YNR001C YNR062CP53748 327 aa3.25□□□□□ -1.89
CIT1YNR001C CWC27Q02770 301 aa3.25□□□□□ -1.89
CIT1YNR001C YPL113CQ02961 396 aa3.25□□□□□ -1.89
CIT1YNR001C RSM10Q03201 203 aa3.25□□□□□ -1.89
CIT1YNR001C RIF2Q06208 395 aa3.25□□□□□ -1.89
CIT1YNR001C RRS1Q08746 203 aaKnown RBP3.25□□□□□ -1.89
CIT1YNR001C YLR126CQ12288 251 aa3.25□□□□□ -1.89
CIT1YNR001C SIR2P06700 562 aa3.24□□□□□ -1.89
CIT1YNR001C NAM2P11325 894 aa3.24□□□□□ -1.89
CIT1YNR001C PET9P18239 318 aaKnown RBP3.24□□□□□ -1.89
CIT1YNR001C GLN3P18494 730 aa3.24□□□□□ -1.89
CIT1YNR001C SCL1P21243 252 aaKnown RBP3.24□□□□□ -1.89
CIT1YNR001C ATG15P25641 520 aa3.24□□□□□ -1.89
CIT1YNR001C CLB6P32943 380 aa3.24□□□□□ -1.89
CIT1YNR001C SSS1P35179 80 aa3.24□□□□□ -1.89
CIT1YNR001C ASP1P38986 381 aaPredicted RBP3.24□□□□□ -1.89
CIT1YNR001C SMB1P40018 196 aaKnown RBP3.24□□□□□ -1.89
CIT1YNR001C HAC1P41546 238 aa3.24□□□□□ -1.89
CIT1YNR001C MEP2P41948 499 aa3.24□□□□□ -1.89
CIT1YNR001C MCM22P47167 239 aa3.24□□□□□ -1.89
CIT1YNR001C UBC13P52490 153 aa3.24□□□□□ -1.89
CIT1YNR001C YGL101WP53144 215 aa3.24□□□□□ -1.89
CIT1YNR001C MPC1P53157 130 aaKnown RBP3.24□□□□□ -1.89
CIT1YNR001C YGL039WP53183 348 aaKnown RBP3.24□□□□□ -1.89
CIT1YNR001C MTM1P53320 366 aa3.24□□□□□ -1.89
CIT1YNR001C ERV29P53337 310 aa3.24□□□□□ -1.89
CIT1YNR001C GAS3Q03655 524 aa3.24□□□□□ -1.89
CIT1YNR001C FIT1Q04433 528 aa3.24□□□□□ -1.89
CIT1YNR001C ARC18Q05933 178 aaKnown RBP3.24□□□□□ -1.89
CIT1YNR001C PEX30Q06169 523 aa3.24□□□□□ -1.89
CIT1YNR001C ANT1Q06497 328 aa3.24□□□□□ -1.89
CIT1YNR001C BRX1Q08235 291 aaKnown RBP3.24□□□□□ -1.89
CIT1YNR001C SME1Q12330 94 aaPredicted RBP3.24□□□□□ -1.89
CIT1YNR001C ATP14Q12349 124 aa3.24□□□□□ -1.89
CIT1YNR001C JLP1Q12358 412 aa3.24□□□□□ -1.89
CIT1YNR001C YPL247CQ12523 523 aa3.24□□□□□ -1.89
CIT1YNR001C HKR1P41809 1802 aa3.23□□□□□ -1.89
CIT1YNR001C UBR2Q07963 1872 aa3.23□□□□□ -1.89
CIT1YNR001C SPT3P06844 337 aa3.23□□□□□ -1.89
CIT1YNR001C ADH3P07246 375 aaKnown RBP3.23□□□□□ -1.89
CIT1YNR001C SPS100P13130 326 aa3.23□□□□□ -1.89
CIT1YNR001C RPB3P16370 318 aaKnown RBP3.23□□□□□ -1.89
CIT1YNR001C PRE7P23724 241 aaKnown RBP3.23□□□□□ -1.89
CIT1YNR001C STP22P25604 385 aa3.23□□□□□ -1.89
CIT1YNR001C QRI5P32344 111 aa3.23□□□□□ -1.89
CIT1YNR001C LHP1P33399 275 aaKnown RBP3.23□□□□□ -1.89
CIT1YNR001C YPC1P38298 316 aa3.23□□□□□ -1.89
CIT1YNR001C URA8P38627 578 aaPredicted RBP3.23□□□□□ -1.89
CIT1YNR001C LCB3P47013 409 aa3.23□□□□□ -1.89
CIT1YNR001C SDT1P53078 280 aa3.23□□□□□ -1.89
CIT1YNR001C YGL159WP53110 370 aa3.23□□□□□ -1.89
CIT1YNR001C NSA1P53136 463 aaPredicted RBP3.23□□□□□ -1.89
CIT1YNR001C ERV14P53173 138 aa3.23□□□□□ -1.89
CIT1YNR001C MTQ1P53944 314 aa3.23□□□□□ -1.89
CIT1YNR001C TPS1Q00764 495 aaKnown RBP3.23□□□□□ -1.89
CIT1YNR001C ARL3Q02804 198 aa3.23□□□□□ -1.89
CIT1YNR001C GOT1Q03554 138 aa3.23□□□□□ -1.89
CIT1YNR001C MRX9Q07349 420 aaKnown RBP3.23□□□□□ -1.89
CIT1YNR001C HEM25Q07534 307 aa3.23□□□□□ -1.89
CIT1YNR001C RRP40Q08285 240 aaKnown RBP3.23□□□□□ -1.89
CIT1YNR001C FCY22Q12119 530 aa3.23□□□□□ -1.89
CIT1YNR001C YCT1Q12235 531 aa3.23□□□□□ -1.89
CIT1YNR001C HEM4P06174 275 aa3.22□□□□□ -1.89
CIT1YNR001C KIN28P06242 306 aa3.22□□□□□ -1.89
CIT1YNR001C HAP2P06774 265 aa3.22□□□□□ -1.89
CIT1YNR001C CBP6P07253 162 aaPredicted RBP3.22□□□□□ -1.89
CIT1YNR001C UBI4P0CG63 381 aaKnown RBP3.22□□□□□ -1.89
CIT1YNR001C RPL20AP0CX23 172 aaKnown RBP3.22□□□□□ -1.89
CIT1YNR001C RPL20BP0CX24 172 aaPredicted RBP3.22□□□□□ -1.89
CIT1YNR001C RPL23AP0CX41 137 aaKnown RBP3.22□□□□□ -1.89
CIT1YNR001C RPL23BP0CX42 137 aaKnown RBP3.22□□□□□ -1.89
CIT1YNR001C YCR022CP25620 114 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 107.6 ms