RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W AVT7P40501 490 aa2.59□□□□□ -1.99
UBP8YMR223W MAM33P40513 266 aa2.59□□□□□ -1.99
UBP8YMR223W FMP41P53889 259 aaKnown RBP2.59□□□□□ -1.99
UBP8YMR223W MRX11Q03079 207 aa2.59□□□□□ -1.99
UBP8YMR223W SDC1Q03323 175 aa2.59□□□□□ -1.99
UBP8YMR223W FMN1Q03778 218 aa2.59□□□□□ -1.99
UBP8YMR223W HRD1Q08109 551 aa2.59□□□□□ -1.99
UBP8YMR223W YOR186WQ08560 144 aa2.59□□□□□ -1.99
UBP8YMR223W EAF3Q12432 401 aa2.59□□□□□ -1.99
UBP8YMR223W DRS2P39524 1355 aa2.59□□□□□ -2
UBP8YMR223W UBI4P0CG63 381 aaKnown RBP2.59□□□□□ -2
UBP8YMR223W SCL1P21243 252 aaKnown RBP2.59□□□□□ -2
UBP8YMR223W RPL16AP26784 199 aaKnown RBP2.59□□□□□ -2
UBP8YMR223W FUN26P31381 517 aa2.59□□□□□ -2
UBP8YMR223W APS1P35181 156 aa2.59□□□□□ -2
UBP8YMR223W CSH1P38287 376 aa2.59□□□□□ -2
UBP8YMR223W ARN2P38724 620 aa2.59□□□□□ -2
UBP8YMR223W KOG1P38873 1557 aa2.59□□□□□ -2
UBP8YMR223W FAR7P43592 221 aa2.59□□□□□ -2
UBP8YMR223W LCB3P47013 409 aa2.59□□□□□ -2
UBP8YMR223W NRM1P53718 249 aa2.59□□□□□ -2
UBP8YMR223W LSM7P53905 115 aaKnown RBP2.59□□□□□ -2
UBP8YMR223W RAV2Q03956 351 aa2.59□□□□□ -2
UBP8YMR223W LIP2Q06005 328 aa2.59□□□□□ -2
UBP8YMR223W RRP40Q08285 240 aaKnown RBP2.59□□□□□ -2
UBP8YMR223W FYV7Q12247 151 aa2.59□□□□□ -2
UBP8YMR223W PRM7Q12459 698 aa2.59□□□□□ -2
UBP8YMR223W PCL9Q12477 304 aa2.59□□□□□ -2
UBP8YMR223W HTZ1Q12692 134 aaKnown RBP2.59□□□□□ -2
UBP8YMR223W HEM4P06174 275 aa2.58□□□□□ -2
UBP8YMR223W STE7P06784 515 aa2.58□□□□□ -2
UBP8YMR223W ATG22P25568 528 aa2.58□□□□□ -2
UBP8YMR223W TFC1P32367 649 aa2.58□□□□□ -2
UBP8YMR223W PTM1P32857 523 aa2.58□□□□□ -2
UBP8YMR223W YKL102CP34249 101 aa2.58□□□□□ -2
UBP8YMR223W BAT1P38891 393 aaKnown RBP2.58□□□□□ -2
UBP8YMR223W RGI1P40043 161 aaPredicted RBP2.58□□□□□ -2
UBP8YMR223W PGD1P40356 397 aa2.58□□□□□ -2
UBP8YMR223W ERJ5P43613 295 aaPredicted RBP2.58□□□□□ -2
UBP8YMR223W BIR1P47134 954 aa2.58□□□□□ -2
UBP8YMR223W YGL101WP53144 215 aa2.58□□□□□ -2
UBP8YMR223W MRPS16Q02608 121 aa2.58□□□□□ -2
UBP8YMR223W GPI17Q04080 534 aa2.58□□□□□ -2
UBP8YMR223W SDH7Q04401 133 aa2.58□□□□□ -2
UBP8YMR223W YDR124WQ04608 324 aa2.58□□□□□ -2
UBP8YMR223W FAR10Q06001 478 aa2.58□□□□□ -2
UBP8YMR223W SHH4Q06236 168 aa2.58□□□□□ -2
UBP8YMR223W YOR376WQ08900 122 aa2.58□□□□□ -2
UBP8YMR223W YPL257WQ08974 193 aa2.58□□□□□ -2
UBP8YMR223W PRR2Q12310 699 aa2.58□□□□□ -2
UBP8YMR223W YIR021W-AQ3E739 70 aa2.58□□□□□ -2
UBP8YMR223W YDL085C-AQ3E7B7 68 aaKnown RBP2.58□□□□□ -2
UBP8YMR223W YKL068W-AQ3E826 78 aa2.58□□□□□ -2
UBP8YMR223W TY1B-DR4Q07793 1604 aa2.58□□□□□ -2
UBP8YMR223W MHP1P43638 1398 aa2.57□□□□□ -2
UBP8YMR223W YIL177CP40434 1758 aa2.57□□□□□ -2
UBP8YMR223W YJL225CP40889 1758 aa2.57□□□□□ -2
UBP8YMR223W COX4P04037 155 aa2.57□□□□□ -2
UBP8YMR223W SIR2P06700 562 aa2.57□□□□□ -2
UBP8YMR223W DDI2P0CH63 225 aa2.57□□□□□ -2
UBP8YMR223W DDI3P0CH64 225 aa2.57□□□□□ -2
UBP8YMR223W PRE7P23724 241 aaKnown RBP2.57□□□□□ -2
UBP8YMR223W SEC14P24280 304 aaKnown RBP2.57□□□□□ -2
UBP8YMR223W MRPL39P36533 70 aa2.57□□□□□ -2
UBP8YMR223W YEA4P40004 342 aa2.57□□□□□ -2
UBP8YMR223W RFC2P40348 353 aa2.57□□□□□ -2
UBP8YMR223W ORM1P53224 222 aa2.57□□□□□ -2
UBP8YMR223W DID2P69771 204 aa2.57□□□□□ -2
UBP8YMR223W PRP11Q07350 266 aaPredicted RBP2.57□□□□□ -2
UBP8YMR223W YOR292CQ08743 309 aa2.57□□□□□ -2
UBP8YMR223W MDM32Q12171 622 aa2.57□□□□□ -2
UBP8YMR223W GEP5Q12393 293 aa2.57□□□□□ -2
UBP8YMR223W YBL112CQ3E7Y4 105 aa2.57□□□□□ -2
UBP8YMR223W YCL001W-BQ96VH2 84 aa2.57□□□□□ -2
UBP8YMR223W YMR316C-AI2HB70 103 aa2.56□□□□□ -2
UBP8YMR223W MSI1P13712 422 aa2.56□□□□□ -2
UBP8YMR223W PET9P18239 318 aaKnown RBP2.56□□□□□ -2
UBP8YMR223W MIR1P23641 311 aaKnown RBP2.56□□□□□ -2
UBP8YMR223W PRY2P36110 329 aa2.56□□□□□ -2
UBP8YMR223W RPS20P38701 121 aaKnown RBP2.56□□□□□ -2
UBP8YMR223W YHL044WP38727 235 aa2.56□□□□□ -2
UBP8YMR223W MRH4P53166 561 aa2.56□□□□□ -2
UBP8YMR223W FMP48P53233 369 aa2.56□□□□□ -2
UBP8YMR223W CRH1P53301 507 aa2.56□□□□□ -2
UBP8YMR223W YGR219WP53307 113 aa2.56□□□□□ -2
UBP8YMR223W ERV29P53337 310 aa2.56□□□□□ -2
UBP8YMR223W RNH201P53942 307 aa2.56□□□□□ -2
UBP8YMR223W TRM12Q04235 462 aa2.56□□□□□ -2
UBP8YMR223W YHC1Q05900 231 aaKnown RBP2.56□□□□□ -2
UBP8YMR223W SUE1Q06524 206 aa2.56□□□□□ -2
UBP8YMR223W DGA1Q08650 418 aa2.56□□□□□ -2
UBP8YMR223W YOR342CQ12182 319 aa2.56□□□□□ -2
UBP8YMR223W IPP1P00817 287 aaKnown RBP2.55□□□□□ -2
UBP8YMR223W RPS18AP0CX55 146 aaKnown RBP2.55□□□□□ -2
UBP8YMR223W RPS18BP0CX56 146 aaPredicted RBP2.55□□□□□ -2
UBP8YMR223W PHO13P19881 312 aa2.55□□□□□ -2
UBP8YMR223W HYM1P32464 399 aa2.55□□□□□ -2
UBP8YMR223W MRPL24P36525 258 aaPredicted RBP2.55□□□□□ -2
UBP8YMR223W YBL081WP38180 368 aaKnown RBP2.55□□□□□ -2
UBP8YMR223W OM14P38325 134 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms