RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	PRP24	P49960	444 aa	Known RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	TRM12	Q04235	462 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	YLR046C	Q12253	270 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	MCT1	Q12283	360 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	YNL162W-A	Q3E7A8	72 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	QCR7	P00128	127 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	PET494	P07390	489 aa	Predicted RBP	0.92	□□□□□ -2.26
CLU1	YMR012W	CSH1	P38287	376 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	CAT5	P41735	233 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	MOB2	P43563	287 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	RRT5	P43607	289 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	COX16	P47081	118 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	YJR154W	P47181	346 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	YNL247W	P53852	767 aa	Known RBP	0.92	□□□□□ -2.26
CLU1	YMR012W	EMI1	Q04406	187 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	API2	Q04413	109 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	URA6	P15700	204 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	TPS2	P31688	896 aa	Known RBP	0.92	□□□□□ -2.26
CLU1	YMR012W	SPO23	P33757	523 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	ZRT3	P34240	503 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	MRPL39	P36533	70 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	PTH1	P38876	190 aa	Known RBP	0.92	□□□□□ -2.26
CLU1	YMR012W	YJR111C	P47148	283 aa	Known RBP	0.92	□□□□□ -2.26
CLU1	YMR012W	YMR099C	Q03161	297 aa	Known RBP	0.92	□□□□□ -2.26
CLU1	YMR012W	URA2	P07259	2214 aa	Known RBP	0.92	□□□□□ -2.26
CLU1	YMR012W	CBP6	P07253	162 aa	Predicted RBP	0.92	□□□□□ -2.26
CLU1	YMR012W	SRY1	P36007	326 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	RCK2	P38623	610 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	RMD6	P39975	231 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	YGR219W	P53307	113 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	RRP40	Q08285	240 aa	Known RBP	0.92	□□□□□ -2.26
CLU1	YMR012W	RDL2	Q08742	149 aa	Known RBP	0.92	□□□□□ -2.26
CLU1	YMR012W	PCL9	Q12477	304 aa		0.92	□□□□□ -2.26
CLU1	YMR012W	HHF1	P02309	103 aa	Known RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	CPA1	P07258	411 aa	Known RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	RPL2A	P0CX45	254 aa	Known RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	RPL2B	P0CX46	254 aa	Known RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	MAK31	P23059	88 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	YCR043C	P25361	127 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	NTF2	P33331	125 aa	Known RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	SPC34	P36131	295 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	YKR041W	P36134	250 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	MEP2	P41948	499 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	YFR057W	P43625	151 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	CPR7	P47103	393 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	YJR056C	P47115	236 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	YLR281C	Q05863	155 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	YOR292C	Q08743	309 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	HMS1	Q12398	434 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	GRX2	P17695	143 aa	Known RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	AIM17	P23180	465 aa	Known RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	EFB1	P32471	206 aa	Known RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	AVT5	P38176	459 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	MIG3	P39943	394 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	HAT2	P39984	401 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	FCY21	P40039	528 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	MDV1	P47025	714 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	YJR149W	P47177	404 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	SCW10	Q04951	389 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	OCH1	P31755	480 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	VMA11	P32842	164 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	YBP1	P38315	674 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	CHL4	P38907	458 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	MST28	P39552	234 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	PRM5	P40476	318 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	RPS29A	P41057	56 aa	Known RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	YNL046W	P53956	172 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	ODC1	Q03028	310 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	YMR226C	Q05016	267 aa	Known RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	YTH1	Q06102	208 aa	Predicted RBP	0.91	□□□□□ -2.26
CLU1	YMR012W	NDL1	Q06568	189 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	PST1	Q12355	444 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	MRX4	Q12467	430 aa		0.91	□□□□□ -2.26
CLU1	YMR012W	AAT2	P23542	418 aa	Known RBP	0.9	□□□□□ -2.26
CLU1	YMR012W	ATP7	P30902	174 aa		0.9	□□□□□ -2.26
CLU1	YMR012W	UTR5	P32630	166 aa		0.9	□□□□□ -2.26
CLU1	YMR012W	CAF4	P36130	643 aa		0.9	□□□□□ -2.26
CLU1	YMR012W	POP8	P38208	133 aa		0.9	□□□□□ -2.26
CLU1	YMR012W	YJL027C	P47063	138 aa	Predicted RBP	0.9	□□□□□ -2.26
CLU1	YMR012W	HAM1	P47119	197 aa	Known RBP	0.9	□□□□□ -2.26
CLU1	YMR012W	ERV29	P53337	310 aa		0.9	□□□□□ -2.26
CLU1	YMR012W	SPO77	Q06134	477 aa		0.9	□□□□□ -2.26
CLU1	YMR012W	YCT1	Q12235	531 aa		0.9	□□□□□ -2.26
CLU1	YMR012W	RPS18A	P0CX55	146 aa	Known RBP	0.9	□□□□□ -2.27
CLU1	YMR012W	RPS18B	P0CX56	146 aa	Predicted RBP	0.9	□□□□□ -2.27
CLU1	YMR012W	PCL1	P24867	279 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	MIG1	P27705	504 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	FZO1	P38297	855 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	MAM33	P40513	266 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	MDM34	P53083	459 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	SDC1	Q03323	175 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	YOR283W	Q12040	230 aa	Known RBP	0.9	□□□□□ -2.27
CLU1	YMR012W	DSF1	P0CX08	502 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	YNR073C	P0CX09	502 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	PTC1	P35182	281 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	YIR020C	P40575	100 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	TIS11	P47977	285 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	CAB4	P53332	305 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	PEX12	Q04370	399 aa		0.9	□□□□□ -2.27
CLU1	YMR012W	SPC2	Q04969	178 aa		0.9	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms