RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C ARC15P40518 154 aaRIP-Chip data2.31□□□□□ -2.04not detected
VPS9YML097C SSU72P53538 206 aaPredicted RBP2.31□□□□□ -2.04
VPS9YML097C RTC4P53850 401 aa2.31□□□□□ -2.04
VPS9YML097C YPR195CQ06594 109 aa2.31□□□□□ -2.04
VPS9YML097C YOL024WQ08172 172 aa2.31□□□□□ -2.04
VPS9YML097C YPL162CQ12042 273 aa2.31□□□□□ -2.04
VPS9YML097C SAS5Q99314 248 aa2.31□□□□□ -2.04
VPS9YML097C YIL177CP40434 1758 aa2.3□□□□□ -2.04
VPS9YML097C YJL225CP40889 1758 aa2.3□□□□□ -2.04
VPS9YML097C TRR1P29509 319 aaKnown RBP2.3□□□□□ -2.04
VPS9YML097C TCA17P32613 152 aa2.3□□□□□ -2.04
VPS9YML097C SKG1P36169 355 aa2.3□□□□□ -2.04
VPS9YML097C YER084WP40057 128 aa2.3□□□□□ -2.04
VPS9YML097C PDS1P40316 373 aaPredicted RBP2.3□□□□□ -2.04
VPS9YML097C MRPL49P40858 161 aaPredicted RBP2.3□□□□□ -2.04
VPS9YML097C BRX1Q08235 291 aaKnown RBP2.3□□□□□ -2.04
VPS9YML097C YOR268CQ08734 132 aa2.3□□□□□ -2.04
VPS9YML097C HMF1P40037 129 aaKnown RBP2.29□□□□□ -2.04
VPS9YML097C YGR050CP53231 118 aa2.29□□□□□ -2.04
VPS9YML097C YFR032C-BQ8TGU2 87 aa2.29□□□□□ -2.04
VPS9YML097C YLR156WP0CE96 114 aa2.28□□□□□ -2.04
VPS9YML097C YLR159WP0CE97 114 aa2.28□□□□□ -2.04
VPS9YML097C YLR161WP0CE98 114 aa2.28□□□□□ -2.04
VPS9YML097C AGA2P32781 87 aa2.28□□□□□ -2.04
VPS9YML097C FMT1P32785 401 aa2.28□□□□□ -2.04
VPS9YML097C POP4P38336 279 aa2.28□□□□□ -2.04
VPS9YML097C YER076CP40049 302 aa2.28□□□□□ -2.04
VPS9YML097C YER121WP40076 114 aa2.28□□□□□ -2.04
VPS9YML097C YKE4P40544 346 aa2.28□□□□□ -2.04
VPS9YML097C EFM5P53200 248 aaKnown RBP2.28□□□□□ -2.04
VPS9YML097C YLR460CP54007 376 aa2.28□□□□□ -2.04
VPS9YML097C ARO80Q04052 950 aa2.28□□□□□ -2.04
VPS9YML097C PEX12Q04370 399 aa2.28□□□□□ -2.04
VPS9YML097C IES4Q08561 116 aa2.28□□□□□ -2.04
VPS9YML097C Q0255P03881 472 aa2.27□□□□□ -2.05
VPS9YML097C KRE1P17260 313 aa2.27□□□□□ -2.05
VPS9YML097C UTP30P36144 274 aaKnown RBP2.27□□□□□ -2.05
VPS9YML097C GLE2P40066 365 aa2.27□□□□□ -2.05
VPS9YML097C YNL184CP53876 108 aa2.27□□□□□ -2.05
VPS9YML097C COG5P53951 403 aa2.27□□□□□ -2.05
VPS9YML097C FEX1Q08913 375 aa2.27□□□□□ -2.05
VPS9YML097C FEX2Q08991 375 aa2.27□□□□□ -2.05
VPS9YML097C QCR2P07257 368 aa2.26□□□□□ -2.05
VPS9YML097C RPS24AP0CX31 135 aaKnown RBP2.26□□□□□ -2.05
VPS9YML097C RPS24BP0CX32 135 aaKnown RBP2.26□□□□□ -2.05
VPS9YML097C MAG1P22134 296 aaKnown RBP2.26□□□□□ -2.05
VPS9YML097C DSK2P48510 373 aa2.26□□□□□ -2.05
VPS9YML097C YNL010WP53981 241 aaKnown RBP2.26□□□□□ -2.05
VPS9YML097C DID2P69771 204 aa2.26□□□□□ -2.05
VPS9YML097C GGA1Q06336 557 aa2.26□□□□□ -2.05
VPS9YML097C RDS3Q06835 107 aaPredicted RBP2.26□□□□□ -2.05
VPS9YML097C YDL012CQ12489 107 aa2.26□□□□□ -2.05
VPS9YML097C MBF1O14467 151 aaKnown RBP2.25□□□□□ -2.05
VPS9YML097C CDC8P00572 216 aa2.25□□□□□ -2.05
VPS9YML097C YKR041WP36134 250 aa2.25□□□□□ -2.05
VPS9YML097C YGR026WP53217 278 aa2.25□□□□□ -2.05
VPS9YML097C YNL140CP53910 189 aa2.25□□□□□ -2.05
VPS9YML097C TRM12Q04235 462 aa2.25□□□□□ -2.05
VPS9YML097C YOR283WQ12040 230 aaKnown RBP2.25□□□□□ -2.05
VPS9YML097C PEX11Q12462 236 aa2.25□□□□□ -2.05
VPS9YML097C RPL9AP05738 191 aaKnown RBP2.24□□□□□ -2.05
VPS9YML097C SNF4P12904 322 aa2.24□□□□□ -2.05
VPS9YML097C BET1P22804 142 aa2.24□□□□□ -2.05
VPS9YML097C YCR090CP25654 182 aaKnown RBP2.24□□□□□ -2.05
VPS9YML097C AME1P38313 324 aa2.24□□□□□ -2.05
VPS9YML097C RPL9BP51401 191 aaKnown RBP2.24□□□□□ -2.05
VPS9YML097C UBC12P52491 188 aa2.24□□□□□ -2.05
VPS9YML097C APJ1P53940 528 aa2.24□□□□□ -2.05
VPS9YML097C AKR2Q12013 749 aa2.24□□□□□ -2.05
VPS9YML097C PSF1Q12488 208 aa2.24□□□□□ -2.05
VPS9YML097C MSW1P04803 379 aa2.23□□□□□ -2.05
VPS9YML097C CKS1P20486 150 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C SCO1P23833 295 aa2.23□□□□□ -2.05
VPS9YML097C MIG1P27705 504 aa2.23□□□□□ -2.05
VPS9YML097C SEC17P32602 292 aa2.23□□□□□ -2.05
VPS9YML097C CTR2P38865 189 aa2.23□□□□□ -2.05
VPS9YML097C SMD3P43321 101 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C YGL235WP53071 178 aa2.23□□□□□ -2.05
VPS9YML097C ARO8P53090 500 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C YGL088WP53151 121 aa2.23□□□□□ -2.05
VPS9YML097C CAB4P53332 305 aa2.23□□□□□ -2.05
VPS9YML097C AIM34Q03673 198 aa2.23□□□□□ -2.05
VPS9YML097C YDR249CQ03787 373 aa2.23□□□□□ -2.05
VPS9YML097C YMR315WQ04869 349 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C SUE1Q06524 206 aa2.23□□□□□ -2.05
VPS9YML097C MCP1Q12106 302 aa2.23□□□□□ -2.05
VPS9YML097C PRM7Q12459 698 aa2.23□□□□□ -2.05
VPS9YML097C MHT1Q12525 324 aa2.23□□□□□ -2.05
VPS9YML097C YDL085C-AQ3E7B7 68 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C FKS1P38631 1876 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C CCH1P50077 2039 aa2.23□□□□□ -2.05
VPS9YML097C REP2P03872 296 aa2.23□□□□□ -2.05
VPS9YML097C URA5P13298 226 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C DPM1P14020 267 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C TIF34P40217 347 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C SNX4P47057 423 aa2.23□□□□□ -2.05
VPS9YML097C ARP3P47117 449 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C AIF1P52923 378 aa2.23□□□□□ -2.05
VPS9YML097C YNL247WP53852 767 aaKnown RBP2.23□□□□□ -2.05
VPS9YML097C DGA1Q08650 418 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms