RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W PTM1P32857 523 aa2.29□□□□□ -2.04
YLR400WYLR400W VPS51P36116 164 aa2.29□□□□□ -2.04
YLR400WYLR400W UTP30P36144 274 aaKnown RBP2.29□□□□□ -2.04
YLR400WYLR400W YGP1P38616 354 aaKnown RBP2.29□□□□□ -2.04
YLR400WYLR400W YER121WP40076 114 aa2.29□□□□□ -2.04
YLR400WYLR400W ARC15P40518 154 aaRIP-Chip data2.29□□□□□ -2.04not detected
YLR400WYLR400W BUD13P46947 266 aaPredicted RBP2.29□□□□□ -2.04
YLR400WYLR400W YNL184CP53876 108 aa2.29□□□□□ -2.04
YLR400WYLR400W YLR460CP54007 376 aa2.29□□□□□ -2.04
YLR400WYLR400W PEX12Q04370 399 aa2.29□□□□□ -2.04
YLR400WYLR400W GRX8Q05926 109 aa2.29□□□□□ -2.04
YLR400WYLR400W YET3Q07451 203 aa2.29□□□□□ -2.04
YLR400WYLR400W PSF1Q12488 208 aa2.29□□□□□ -2.04
YLR400WYLR400W RPL9AP05738 191 aaKnown RBP2.28□□□□□ -2.04
YLR400WYLR400W YPR170W-BP0C5R9 85 aa2.28□□□□□ -2.04
YLR400WYLR400W GCY1P14065 312 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
YLR400WYLR400W CNB1P25296 175 aa2.28□□□□□ -2.04
YLR400WYLR400W TAH1P25638 111 aaPredicted RBP2.28□□□□□ -2.04
YLR400WYLR400W CLG1P35190 452 aa2.28□□□□□ -2.04
YLR400WYLR400W CAF4P36130 643 aa2.28□□□□□ -2.04
YLR400WYLR400W YAR068WP39564 161 aa2.28□□□□□ -2.04
YLR400WYLR400W RPL9BP51401 191 aaKnown RBP2.28□□□□□ -2.04
YLR400WYLR400W GAS3Q03655 524 aa2.28□□□□□ -2.04
YLR400WYLR400W YMD8Q03697 442 aa2.28□□□□□ -2.04
YLR400WYLR400W TRM12Q04235 462 aa2.28□□□□□ -2.04
YLR400WYLR400W ATG39Q06159 398 aa2.28□□□□□ -2.04
YLR400WYLR400W SAS5Q99314 248 aa2.28□□□□□ -2.04
YLR400WYLR400W RPL25P04456 142 aaKnown RBP2.27□□□□□ -2.05
YLR400WYLR400W YLR156WP0CE96 114 aa2.27□□□□□ -2.05
YLR400WYLR400W YLR159WP0CE97 114 aa2.27□□□□□ -2.05
YLR400WYLR400W YLR161WP0CE98 114 aa2.27□□□□□ -2.05
YLR400WYLR400W KRE1P17260 313 aa2.27□□□□□ -2.05
YLR400WYLR400W CCA1P21269 546 aa2.27□□□□□ -2.05
YLR400WYLR400W MAG1P22134 296 aaKnown RBP2.27□□□□□ -2.05
YLR400WYLR400W MAK5P38112 773 aaPredicted RBP2.27□□□□□ -2.05
YLR400WYLR400W POP4P38336 279 aa2.27□□□□□ -2.05
YLR400WYLR400W YER188WP40103 239 aa2.27□□□□□ -2.05
YLR400WYLR400W RTC4P53850 401 aa2.27□□□□□ -2.05
YLR400WYLR400W YDR249CQ03787 373 aa2.27□□□□□ -2.05
YLR400WYLR400W YMR315WQ04869 349 aaKnown RBP2.27□□□□□ -2.05
YLR400WYLR400W YOL024WQ08172 172 aa2.27□□□□□ -2.05
YLR400WYLR400W MCP1Q12106 302 aa2.27□□□□□ -2.05
YLR400WYLR400W MDM32Q12171 622 aa2.27□□□□□ -2.05
YLR400WYLR400W YFR032C-BQ8TGU2 87 aa2.27□□□□□ -2.05
YLR400WYLR400W PUT1P09368 476 aa2.26□□□□□ -2.05
YLR400WYLR400W YHR032W-AP0C5N6 59 aa2.26□□□□□ -2.05
YLR400WYLR400W SCO1P23833 295 aa2.26□□□□□ -2.05
YLR400WYLR400W ATG22P25568 528 aa2.26□□□□□ -2.05
YLR400WYLR400W YCR090CP25654 182 aaKnown RBP2.26□□□□□ -2.05
YLR400WYLR400W TRR1P29509 319 aaKnown RBP2.26□□□□□ -2.05
YLR400WYLR400W FMP23P38231 175 aa2.26□□□□□ -2.05
YLR400WYLR400W FES1P38260 290 aa2.26□□□□□ -2.05
YLR400WYLR400W SRP14P38985 146 aa2.26□□□□□ -2.05
YLR400WYLR400W AST2P39945 430 aaKnown RBP2.26□□□□□ -2.05
YLR400WYLR400W RMD6P39975 231 aa2.26□□□□□ -2.05
YLR400WYLR400W HMF1P40037 129 aaKnown RBP2.26□□□□□ -2.05
YLR400WYLR400W PDS1P40316 373 aaPredicted RBP2.26□□□□□ -2.05
YLR400WYLR400W YNL247WP53852 767 aaKnown RBP2.26□□□□□ -2.05
YLR400WYLR400W YPR195CQ06594 109 aa2.26□□□□□ -2.05
YLR400WYLR400W YPL162CQ12042 273 aa2.26□□□□□ -2.05
YLR400WYLR400W IGO2Q9P305 131 aa2.26□□□□□ -2.05
YLR400WYLR400W SIR2P06700 562 aa2.25□□□□□ -2.05
YLR400WYLR400W ADH3P07246 375 aaKnown RBP2.25□□□□□ -2.05
YLR400WYLR400W RSA4P25382 515 aaKnown RBP2.25□□□□□ -2.05
YLR400WYLR400W ARO7P32178 256 aa2.25□□□□□ -2.05
YLR400WYLR400W FMT1P32785 401 aa2.25□□□□□ -2.05
YLR400WYLR400W SDH4P37298 181 aa2.25□□□□□ -2.05
YLR400WYLR400W SPO73P40031 143 aa2.25□□□□□ -2.05
YLR400WYLR400W ICE2P40499 491 aa2.25□□□□□ -2.05
YLR400WYLR400W EFM5P53200 248 aaKnown RBP2.25□□□□□ -2.05
YLR400WYLR400W YDR114CQ04597 100 aa2.25□□□□□ -2.05
YLR400WYLR400W ARR2Q06597 130 aa2.25□□□□□ -2.05
YLR400WYLR400W AKR2Q12013 749 aa2.25□□□□□ -2.05
YLR400WYLR400W CDC8P00572 216 aa2.24□□□□□ -2.05
YLR400WYLR400W RPL26AP05743 127 aaKnown RBP2.24□□□□□ -2.05
YLR400WYLR400W RPB3P16370 318 aaKnown RBP2.24□□□□□ -2.05
YLR400WYLR400W PET9P18239 318 aaKnown RBP2.24□□□□□ -2.05
YLR400WYLR400W UBC6P33296 250 aaPredicted RBP2.24□□□□□ -2.05
YLR400WYLR400W YKR032WP36127 104 aa2.24□□□□□ -2.05
YLR400WYLR400W YKE4P40544 346 aa2.24□□□□□ -2.05
YLR400WYLR400W PRM10P42946 383 aa2.24□□□□□ -2.05
YLR400WYLR400W ARP3P47117 449 aaKnown RBP2.24□□□□□ -2.05
YLR400WYLR400W YJR146WP47174 117 aa2.24□□□□□ -2.05
YLR400WYLR400W YGL088WP53151 121 aa2.24□□□□□ -2.05
YLR400WYLR400W YGR026WP53217 278 aa2.24□□□□□ -2.05
YLR400WYLR400W RPL26BP53221 127 aaKnown RBP2.24□□□□□ -2.05
YLR400WYLR400W SWP1Q02795 286 aa2.24□□□□□ -2.05
YLR400WYLR400W PRM15Q03262 622 aa2.24□□□□□ -2.05
YLR400WYLR400W RIO1Q12196 484 aaKnown RBP2.24□□□□□ -2.05
YLR400WYLR400W YDL085C-AQ3E7B7 68 aaKnown RBP2.24□□□□□ -2.05
YLR400WYLR400W FKS1P38631 1876 aaKnown RBP2.23□□□□□ -2.05
YLR400WYLR400W MBF1O14467 151 aaKnown RBP2.23□□□□□ -2.05
YLR400WYLR400W MGT1P26188 188 aa2.23□□□□□ -2.05
YLR400WYLR400W MIG1P27705 504 aa2.23□□□□□ -2.05
YLR400WYLR400W SCM4P32564 187 aa2.23□□□□□ -2.05
YLR400WYLR400W MED6P38782 295 aa2.23□□□□□ -2.05
YLR400WYLR400W YER076CP40049 302 aa2.23□□□□□ -2.05
YLR400WYLR400W YLR036CQ07986 203 aa2.23□□□□□ -2.05
YLR400WYLR400W YOR283WQ12040 230 aaKnown RBP2.23□□□□□ -2.05
YLR400WYLR400W SNF4P12904 322 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms