RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W FYV6P53913 173 aa1.68□□□□□ -2.14
VPS38YLR360W OCA6Q12454 224 aa1.68□□□□□ -2.14
VPS38YLR360W YOR093CQ12275 1648 aa1.68□□□□□ -2.14
VPS38YLR360W YRF1-1P0CX20 1796 aa1.68□□□□□ -2.14
VPS38YLR360W YRF1-5P0CX21 1796 aa1.68□□□□□ -2.14
VPS38YLR360W YRF1-8P0CX22 1796 aa1.68□□□□□ -2.14
VPS38YLR360W MYO1P08964 1928 aa1.68□□□□□ -2.14
VPS38YLR360W Q0255P03881 472 aa1.67□□□□□ -2.14
VPS38YLR360W YKR104WP0CE69 306 aa1.67□□□□□ -2.14
VPS38YLR360W NMT1P14743 455 aa1.67□□□□□ -2.14
VPS38YLR360W RPO26P20435 155 aa1.67□□□□□ -2.14
VPS38YLR360W MSA2P36157 363 aa1.67□□□□□ -2.14
VPS38YLR360W YHR125WP38831 101 aa1.67□□□□□ -2.14
VPS38YLR360W MTW1P39731 289 aa1.67□□□□□ -2.14
VPS38YLR360W AST2P39945 430 aaKnown RBP1.67□□□□□ -2.14
VPS38YLR360W SMB1P40018 196 aaKnown RBP1.67□□□□□ -2.14
VPS38YLR360W GVP36P40531 326 aaKnown RBP1.67□□□□□ -2.14
VPS38YLR360W HYR1P40581 163 aaKnown RBP1.67□□□□□ -2.14
VPS38YLR360W TMA22P47089 198 aaPredicted RBP1.67□□□□□ -2.14
VPS38YLR360W MRH4P53166 561 aa1.67□□□□□ -2.14
VPS38YLR360W MPP6P53725 186 aaPredicted RBP1.67□□□□□ -2.14
VPS38YLR360W CTF19Q02732 369 aa1.67□□□□□ -2.14
VPS38YLR360W SWP1Q02795 286 aa1.67□□□□□ -2.14
VPS38YLR360W SPC24Q04477 213 aa1.67□□□□□ -2.14
VPS38YLR360W DAS2Q12084 232 aa1.67□□□□□ -2.14
VPS38YLR360W ATO3Q12359 275 aa1.67□□□□□ -2.14
VPS38YLR360W SEY1Q99287 776 aa1.67□□□□□ -2.14
VPS38YLR360W MOT1P32333 1867 aa1.67□□□□□ -2.14
VPS38YLR360W UBR2Q07963 1872 aa1.67□□□□□ -2.14
VPS38YLR360W VMR1P38735 1592 aa1.67□□□□□ -2.14
VPS38YLR360W VTH2P40890 1549 aa1.67□□□□□ -2.14
VPS38YLR360W YLR462WO13556 202 aa1.66□□□□□ -2.14
VPS38YLR360W RPS24AP0CX31 135 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W RPS24BP0CX32 135 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W KSS1P14681 368 aa1.66□□□□□ -2.14
VPS38YLR360W YCR101CP25607 182 aa1.66□□□□□ -2.14
VPS38YLR360W YCR016WP25617 290 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W SRB4P32569 687 aa1.66□□□□□ -2.14
VPS38YLR360W YBL010CP32788 280 aa1.66□□□□□ -2.14
VPS38YLR360W SGE1P33335 543 aa1.66□□□□□ -2.14
VPS38YLR360W YKT6P36015 200 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W MRPL39P36533 70 aa1.66□□□□□ -2.14
VPS38YLR360W YEL075CP39972 122 aa1.66□□□□□ -2.14
VPS38YLR360W AYR1P40471 297 aa1.66□□□□□ -2.14
VPS38YLR360W SMD3P43321 101 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W YFH7P43591 353 aa1.66□□□□□ -2.14
VPS38YLR360W FAR7P43592 221 aa1.66□□□□□ -2.14
VPS38YLR360W VMA10P48836 114 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W MRPL50P53724 139 aa1.66□□□□□ -2.14
VPS38YLR360W GIM3P53900 129 aa1.66□□□□□ -2.14
VPS38YLR360W YPR098CQ06089 161 aa1.66□□□□□ -2.14
VPS38YLR360W COQ10Q08058 207 aa1.66□□□□□ -2.14
VPS38YLR360W SYC1Q08553 188 aaPredicted RBP1.66□□□□□ -2.14
VPS38YLR360W BTS1Q12051 335 aa1.66□□□□□ -2.14
VPS38YLR360W MSH5Q12175 901 aa1.66□□□□□ -2.14
VPS38YLR360W ADF1Q2V2Q1 113 aa1.66□□□□□ -2.14
VPS38YLR360W LTE1P07866 1435 aa1.66□□□□□ -2.14
VPS38YLR360W RPO41P13433 1351 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W BNI1P41832 1953 aa1.66□□□□□ -2.14
VPS38YLR360W SLH1P53327 1967 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W IPP1P00817 287 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W ARG80P07249 177 aa1.66□□□□□ -2.14
VPS38YLR360W MATALPHA2P0CY08 210 aa1.66□□□□□ -2.14
VPS38YLR360W HMLALPHA2P0CY09 210 aa1.66□□□□□ -2.14
VPS38YLR360W GCN3P14741 305 aa1.66□□□□□ -2.14
VPS38YLR360W STF2P16965 84 aa1.66□□□□□ -2.14
VPS38YLR360W YPK2P18961 677 aa1.66□□□□□ -2.14
VPS38YLR360W NTG1P31378 399 aa1.66□□□□□ -2.14
VPS38YLR360W MGM101P32787 269 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W VMA11P32842 164 aa1.66□□□□□ -2.14
VPS38YLR360W ECM31P38122 312 aa1.66□□□□□ -2.14
VPS38YLR360W FES1P38260 290 aa1.66□□□□□ -2.14
VPS38YLR360W THO1P40040 218 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W YAR1P46683 200 aa1.66□□□□□ -2.14
VPS38YLR360W YGR026WP53217 278 aa1.66□□□□□ -2.14
VPS38YLR360W PGA2P53903 129 aa1.66□□□□□ -2.14
VPS38YLR360W SRL4Q03085 281 aa1.66□□□□□ -2.14
VPS38YLR360W SPC2Q04969 178 aa1.66□□□□□ -2.14
VPS38YLR360W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
VPS38YLR360W YLR031WQ07978 186 aa1.66□□□□□ -2.14
VPS38YLR360W RRP40Q08285 240 aaKnown RBP1.66□□□□□ -2.14
VPS38YLR360W AKR2Q12013 749 aa1.66□□□□□ -2.14
VPS38YLR360W SNU23Q12368 194 aaPredicted RBP1.66□□□□□ -2.14
VPS38YLR360W RTR2Q12378 196 aa1.66□□□□□ -2.14
VPS38YLR360W GIS3Q12418 502 aa1.66□□□□□ -2.14
VPS38YLR360W CMC2Q3E7A4 109 aa1.66□□□□□ -2.14
VPS38YLR360W PDR11P40550 1411 aa1.65□□□□□ -2.14
VPS38YLR360W EHD3P28817 500 aa1.65□□□□□ -2.15
VPS38YLR360W TFC1P32367 649 aa1.65□□□□□ -2.15
VPS38YLR360W CPR5P35176 225 aa1.65□□□□□ -2.15
VPS38YLR360W POP7P38291 140 aa1.65□□□□□ -2.15
VPS38YLR360W YGL159WP53110 370 aa1.65□□□□□ -2.15
VPS38YLR360W DAD3P69850 94 aa1.65□□□□□ -2.15
VPS38YLR360W RRN5Q02983 363 aa1.65□□□□□ -2.15
VPS38YLR360W YMR279CQ03263 540 aa1.65□□□□□ -2.15
VPS38YLR360W GPI17Q04080 534 aa1.65□□□□□ -2.15
VPS38YLR360W SPG4Q04438 115 aa1.65□□□□□ -2.15
VPS38YLR360W YPD1Q07688 167 aa1.65□□□□□ -2.15
VPS38YLR360W YLR030WQ07967 263 aa1.65□□□□□ -2.15
VPS38YLR360W RRS1Q08746 203 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms