RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YER076CP40049 302 aa1.59□□□□□ -2.15
ATG38YLR211C YER189WP40104 122 aa1.59□□□□□ -2.15
ATG38YLR211C ILM1P47155 203 aa1.59□□□□□ -2.15
ATG38YLR211C YGL235WP53071 178 aa1.59□□□□□ -2.15
ATG38YLR211C SLM2P53955 656 aa1.59□□□□□ -2.15
ATG38YLR211C ARO80Q04052 950 aa1.59□□□□□ -2.15
ATG38YLR211C NIP7Q08962 181 aaKnown RBP1.59□□□□□ -2.15
ATG38YLR211C BBP1Q12365 385 aa1.59□□□□□ -2.15
ATG38YLR211C YPL247CQ12523 523 aa1.59□□□□□ -2.15
ATG38YLR211C TDA8Q6B2U8 126 aa1.59□□□□□ -2.15
ATG38YLR211C DSF1P0CX08 502 aa1.58□□□□□ -2.16
ATG38YLR211C YNR073CP0CX09 502 aa1.58□□□□□ -2.16
ATG38YLR211C FCY2P17064 533 aa1.58□□□□□ -2.16
ATG38YLR211C RNP1P32385 249 aa1.58□□□□□ -2.16
ATG38YLR211C SFC1P33303 322 aa1.58□□□□□ -2.16
ATG38YLR211C YPT52P36018 234 aaKnown RBP1.58□□□□□ -2.16
ATG38YLR211C YKR041WP36134 250 aa1.58□□□□□ -2.16
ATG38YLR211C TEM1P38987 245 aa1.58□□□□□ -2.16
ATG38YLR211C PDS1P40316 373 aaPredicted RBP1.58□□□□□ -2.16
ATG38YLR211C COS6P53344 381 aa1.58□□□□□ -2.16
ATG38YLR211C LSM7P53905 115 aaKnown RBP1.58□□□□□ -2.16
ATG38YLR211C GAS3Q03655 524 aa1.58□□□□□ -2.16
ATG38YLR211C YLR036CQ07986 203 aa1.58□□□□□ -2.16
ATG38YLR211C YOL024WQ08172 172 aa1.58□□□□□ -2.16
ATG38YLR211C YPL257WQ08974 193 aa1.58□□□□□ -2.16
ATG38YLR211C GEP5Q12393 293 aa1.58□□□□□ -2.16
ATG38YLR211C EMP46Q12396 444 aa1.58□□□□□ -2.16
ATG38YLR211C NOT5Q12514 560 aaPredicted RBP1.58□□□□□ -2.16
ATG38YLR211C ISD11Q6Q560 94 aa1.58□□□□□ -2.16
ATG38YLR211C HTL1Q9URQ5 78 aa1.58□□□□□ -2.16
ATG38YLR211C YLR462WO13556 202 aa1.57□□□□□ -2.16
ATG38YLR211C RAD10P06838 210 aa1.57□□□□□ -2.16
ATG38YLR211C SEC4P07560 215 aaKnown RBP1.57□□□□□ -2.16
ATG38YLR211C YPR170W-BP0C5R9 85 aa1.57□□□□□ -2.16
ATG38YLR211C YCR090CP25654 182 aaKnown RBP1.57□□□□□ -2.16
ATG38YLR211C RCN1P36054 211 aa1.57□□□□□ -2.16
ATG38YLR211C FES1P38260 290 aa1.57□□□□□ -2.16
ATG38YLR211C DOG2P38773 246 aa1.57□□□□□ -2.16
ATG38YLR211C DOG1P38774 246 aa1.57□□□□□ -2.16
ATG38YLR211C YEL075CP39972 122 aa1.57□□□□□ -2.16
ATG38YLR211C RMD6P39975 231 aa1.57□□□□□ -2.16
ATG38YLR211C PRM8P53174 237 aa1.57□□□□□ -2.16
ATG38YLR211C RTC4P53850 401 aa1.57□□□□□ -2.16
ATG38YLR211C YMD8Q03697 442 aa1.57□□□□□ -2.16
ATG38YLR211C RPL25P04456 142 aaKnown RBP1.56□□□□□ -2.16
ATG38YLR211C CDC7P06243 507 aa1.56□□□□□ -2.16
ATG38YLR211C SIR2P06700 562 aa1.56□□□□□ -2.16
ATG38YLR211C RPS28BP0C0X0 67 aaKnown RBP1.56□□□□□ -2.16
ATG38YLR211C BMH1P29311 267 aaKnown RBP1.56□□□□□ -2.16
ATG38YLR211C TCA17P32613 152 aa1.56□□□□□ -2.16
ATG38YLR211C YBR063CP38083 404 aa1.56□□□□□ -2.16
ATG38YLR211C FIG1P38224 298 aa1.56□□□□□ -2.16
ATG38YLR211C MTW1P39731 289 aa1.56□□□□□ -2.16
ATG38YLR211C IRC22P40006 225 aa1.56□□□□□ -2.16
ATG38YLR211C RPA43P46669 326 aa1.56□□□□□ -2.16
ATG38YLR211C UBC12P52491 188 aa1.56□□□□□ -2.16
ATG38YLR211C YGR050CP53231 118 aa1.56□□□□□ -2.16
ATG38YLR211C YNL247WP53852 767 aaKnown RBP1.56□□□□□ -2.16
ATG38YLR211C YNL184CP53876 108 aa1.56□□□□□ -2.16
ATG38YLR211C LPP1Q04396 274 aa1.56□□□□□ -2.16
ATG38YLR211C YMR315WQ04869 349 aaKnown RBP1.56□□□□□ -2.16
ATG38YLR211C GGA1Q06336 557 aa1.56□□□□□ -2.16
ATG38YLR211C SMT3Q12306 101 aaKnown RBP1.56□□□□□ -2.16
ATG38YLR211C LSO2Q3E772 92 aaKnown RBP1.56□□□□□ -2.16
ATG38YLR211C RPS28AQ3E7X9 67 aaPredicted RBP1.56□□□□□ -2.16
ATG38YLR211C YOR020W-AQ3E824 90 aa1.56□□□□□ -2.16
ATG38YLR211C YFR032C-BQ8TGU2 87 aa1.56□□□□□ -2.16
ATG38YLR211C MEI4P29467 408 aa1.55□□□□□ -2.16
ATG38YLR211C CLG1P35190 452 aa1.55□□□□□ -2.16
ATG38YLR211C DER1P38307 211 aa1.55□□□□□ -2.16
ATG38YLR211C RPF1P38805 295 aaKnown RBP1.55□□□□□ -2.16
ATG38YLR211C YAR068WP39564 161 aa1.55□□□□□ -2.16
ATG38YLR211C YFH7P43591 353 aa1.55□□□□□ -2.16
ATG38YLR211C GON7P46984 123 aa1.55□□□□□ -2.16
ATG38YLR211C SBH2P52871 88 aa1.55□□□□□ -2.16
ATG38YLR211C JAC1P53193 184 aa1.55□□□□□ -2.16
ATG38YLR211C ABF2Q02486 183 aa1.55□□□□□ -2.16
ATG38YLR211C RSM10Q03201 203 aa1.55□□□□□ -2.16
ATG38YLR211C ATG39Q06159 398 aa1.55□□□□□ -2.16
ATG38YLR211C YPL162CQ12042 273 aa1.55□□□□□ -2.16
ATG38YLR211C PEX11Q12462 236 aa1.55□□□□□ -2.16
ATG38YLR211C SGA1P08019 549 aa1.54□□□□□ -2.16
ATG38YLR211C RPS24AP0CX31 135 aaKnown RBP1.54□□□□□ -2.16
ATG38YLR211C RPS24BP0CX32 135 aaKnown RBP1.54□□□□□ -2.16
ATG38YLR211C GRX2P17695 143 aaKnown RBP1.54□□□□□ -2.16
ATG38YLR211C ATG22P25568 528 aa1.54□□□□□ -2.16
ATG38YLR211C UTP30P36144 274 aaKnown RBP1.54□□□□□ -2.16
ATG38YLR211C MAK5P38112 773 aaPredicted RBP1.54□□□□□ -2.16
ATG38YLR211C AST2P39945 430 aaKnown RBP1.54□□□□□ -2.16
ATG38YLR211C HMF1P40037 129 aaKnown RBP1.54□□□□□ -2.16
ATG38YLR211C FIS1P40515 155 aa1.54□□□□□ -2.16
ATG38YLR211C TMA22P47089 198 aaPredicted RBP1.54□□□□□ -2.16
ATG38YLR211C COG5P53951 403 aa1.54□□□□□ -2.16
ATG38YLR211C YML108WQ03759 105 aa1.54□□□□□ -2.16
ATG38YLR211C RRP17Q04031 235 aaPredicted RBP1.54□□□□□ -2.16
ATG38YLR211C PEX12Q04370 399 aa1.54□□□□□ -2.16
ATG38YLR211C ARR2Q06597 130 aa1.54□□□□□ -2.16
ATG38YLR211C PET20Q99373 253 aa1.54□□□□□ -2.16
ATG38YLR211C MBF1O14467 151 aaKnown RBP1.53□□□□□ -2.16
ATG38YLR211C YHR032W-AP0C5N6 59 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 127.2 ms