RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI6	YLR182W	PSF1	Q12488	208 aa		0.83	□□□□□ -2.28
SWI6	YLR182W	BNI1	P41832	1953 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	SPO14	P36126	1683 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	NUP170	P38181	1502 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	FBA1	P14540	359 aa	Known RBP	0.82	□□□□□ -2.28
SWI6	YLR182W	FCY2	P17064	533 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
SWI6	YLR182W	ERV15	P38312	142 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	CIS3	P47001	227 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	ALG13	P53178	202 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	KRE28	Q04431	385 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	YLR283W	Q05867	314 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	BOL1	Q3E793	110 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	ACC1	Q00955	2233 aa	Known RBP	0.82	□□□□□ -2.28
SWI6	YLR182W	LTE1	P07866	1435 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	SRB8	P25648	1427 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	IRC20	Q06554	1556 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	DNF2	Q12675	1612 aa		0.82	□□□□□ -2.28
SWI6	YLR182W	REP2	P03872	296 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	PET9	P18239	318 aa	Known RBP	0.81	□□□□□ -2.28
SWI6	YLR182W	CDC10	P25342	322 aa	Known RBP	0.81	□□□□□ -2.28
SWI6	YLR182W	SRB4	P32569	687 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	YBR063C	P38083	404 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	YER135C	P40082	130 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	YJR056C	P47115	236 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	LIA1	P47120	325 aa	Known RBP	0.81	□□□□□ -2.28
SWI6	YLR182W	NUP84	P52891	726 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	BOL2	P53082	120 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	CSI2	Q08054	341 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	KRE5	P22023	1365 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	MET5	P47169	1442 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	MSW1	P04803	379 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	MEI4	P29467	408 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	RIB1	P38066	345 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	YBR219C	P38317	127 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	YMR144W	P40214	342 aa	Known RBP	0.81	□□□□□ -2.28
SWI6	YLR182W	RMR1	P53060	241 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	YGR219W	P53307	113 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	YNR077C	P53758	84 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	PDR12	Q02785	1511 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	MLP2	P40457	1679 aa		0.81	□□□□□ -2.28
SWI6	YLR182W	SEC7	P11075	2009 aa	Known RBP	0.81	□□□□□ -2.28
SWI6	YLR182W	BCY1	P07278	416 aa	Known RBP	0.8	□□□□□ -2.28
SWI6	YLR182W	RPS24A	P0CX31	135 aa	Known RBP	0.8	□□□□□ -2.28
SWI6	YLR182W	RPS24B	P0CX32	135 aa	Known RBP	0.8	□□□□□ -2.28
SWI6	YLR182W	YBT1	P32386	1661 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	PEP8	P40335	379 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	YRB2	P40517	327 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	YKE4	P40544	346 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
SWI6	YLR182W	TPO4	Q12256	659 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	CAT8	P39113	1433 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	MMS1	Q06211	1407 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	SPT3	P06844	337 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	ARG80	P07249	177 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	YCR016W	P25617	290 aa	Known RBP	0.8	□□□□□ -2.28
SWI6	YLR182W	YKR045C	P36138	183 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	YER085C	P40058	173 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	FMC1	P40491	155 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	PET191	Q02772	108 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	PRM15	Q03262	622 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	YML096W	Q04489	525 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	YLR162W	Q06235	118 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	YOR020W-A	Q3E824	90 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	RPO21	P04050	1733 aa	Known RBP	0.8	□□□□□ -2.28
SWI6	YLR182W	NUP192	P47054	1683 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	VMR1	P38735	1592 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	VPS13	Q07878	3144 aa		0.8	□□□□□ -2.28
SWI6	YLR182W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.8	□□□□□ -2.28
SWI6	YLR182W	MIC12	P38341	106 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	DSE2	P38844	325 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	YIL001W	P40560	513 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	LPP1	Q04396	274 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	DCN1	Q12395	269 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	UBR2	Q07963	1872 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	RPL27B	P0C2H7	136 aa	Known RBP	0.79	□□□□□ -2.28
SWI6	YLR182W	YPR170W-B	P0C5R9	85 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	SIP3	P38717	1229 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	YAR068W	P39564	161 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	AGE2	P40529	298 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	YNL010W	P53981	241 aa	Known RBP	0.79	□□□□□ -2.28
SWI6	YLR182W	SML1	Q04964	104 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	MED4	Q12343	284 aa		0.79	□□□□□ -2.28
SWI6	YLR182W	YLR419W	Q06698	1435 aa	Known RBP	0.79	□□□□□ -2.28
SWI6	YLR182W	YOR093C	Q12275	1648 aa		0.78	□□□□□ -2.28
SWI6	YLR182W	THP2	O13539	261 aa	Known RBP	0.78	□□□□□ -2.28
SWI6	YLR182W	CDC8	P00572	216 aa		0.78	□□□□□ -2.28
SWI6	YLR182W	MRPL25	P23369	157 aa		0.78	□□□□□ -2.28
SWI6	YLR182W	OPY1	P38271	328 aa		0.78	□□□□□ -2.28
SWI6	YLR182W	TIR3	P40552	269 aa		0.78	□□□□□ -2.28
SWI6	YLR182W	PDR18	P53756	1333 aa		0.78	□□□□□ -2.28
SWI6	YLR182W	CDC28	P00546	298 aa	Known RBP	0.78	□□□□□ -2.28
SWI6	YLR182W	RPL2A	P0CX45	254 aa	Known RBP	0.78	□□□□□ -2.28
SWI6	YLR182W	RPL2B	P0CX46	254 aa	Known RBP	0.78	□□□□□ -2.28
SWI6	YLR182W	DBF2	P22204	572 aa		0.78	□□□□□ -2.28
SWI6	YLR182W	MSN4	P33749	630 aa		0.78	□□□□□ -2.28
SWI6	YLR182W	HAM1	P47119	197 aa	Known RBP	0.78	□□□□□ -2.28
SWI6	YLR182W	DOC1	P53068	250 aa		0.78	□□□□□ -2.28
SWI6	YLR182W	MRPL50	P53724	139 aa		0.78	□□□□□ -2.28
SWI6	YLR182W	DID2	P69771	204 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms