RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W EAF3Q12432 401 aa3.86□□□□□ -1.79
CBF5YLR175W PET122P10355 254 aa3.86□□□□□ -1.79
CBF5YLR175W FUS3P16892 353 aaKnown RBP3.86□□□□□ -1.79
CBF5YLR175W DAL80P26343 269 aa3.86□□□□□ -1.79
CBF5YLR175W IMP1P28627 190 aa3.86□□□□□ -1.79
CBF5YLR175W OCH1P31755 480 aa3.86□□□□□ -1.79
CBF5YLR175W PAN3P36102 679 aaPredicted RBP3.86□□□□□ -1.79
CBF5YLR175W UTP30P36144 274 aaKnown RBP3.86□□□□□ -1.79
CBF5YLR175W RRF1P38771 230 aa3.86□□□□□ -1.79
CBF5YLR175W BMT5P40493 336 aa3.86□□□□□ -1.79
CBF5YLR175W YJR011CP47086 261 aaPredicted RBP3.86□□□□□ -1.79
CBF5YLR175W SOL1P50278 321 aa3.86□□□□□ -1.79
CBF5YLR175W NIF3P53081 288 aa3.86□□□□□ -1.79
CBF5YLR175W ALG9P53868 555 aaKnown RBP3.86□□□□□ -1.79
CBF5YLR175W YDR286CQ05530 114 aa3.86□□□□□ -1.79
CBF5YLR175W YTH1Q06102 208 aaPredicted RBP3.86□□□□□ -1.79
CBF5YLR175W SCP1Q08873 200 aa3.86□□□□□ -1.79
CBF5YLR175W YLR365WQ7LIF2 110 aa3.86□□□□□ -1.79
CBF5YLR175W GRX2P17695 143 aaKnown RBP3.85□□□□□ -1.79
CBF5YLR175W MNS1P32906 549 aa3.85□□□□□ -1.79
CBF5YLR175W SHM2P37291 469 aaKnown RBP3.85□□□□□ -1.79
CBF5YLR175W POP8P38208 133 aa3.85□□□□□ -1.79
CBF5YLR175W NTC20P38302 140 aaPredicted RBP3.85□□□□□ -1.79
CBF5YLR175W LAG1P38703 411 aa3.85□□□□□ -1.79
CBF5YLR175W POP2P39008 433 aa3.85□□□□□ -1.79
CBF5YLR175W RMD6P39975 231 aa3.85□□□□□ -1.79
CBF5YLR175W GON7P46984 123 aa3.85□□□□□ -1.79
CBF5YLR175W SED1Q01589 338 aa3.85□□□□□ -1.79
CBF5YLR175W NRG1Q03125 231 aa3.85□□□□□ -1.79
CBF5YLR175W GMC1Q04399 608 aa3.85□□□□□ -1.79
CBF5YLR175W LIP2Q06005 328 aa3.85□□□□□ -1.79
CBF5YLR175W YDL086WQ07505 273 aa3.85□□□□□ -1.79
CBF5YLR175W FCY22Q12119 530 aa3.85□□□□□ -1.79
CBF5YLR175W FRE8Q12209 686 aa3.85□□□□□ -1.79
CBF5YLR175W PRM4Q12498 284 aa3.85□□□□□ -1.79
CBF5YLR175W ATG40Q99325 256 aa3.85□□□□□ -1.79
CBF5YLR175W UBA3Q99344 299 aa3.85□□□□□ -1.79
CBF5YLR175W REP2P03872 296 aa3.84□□□□□ -1.8
CBF5YLR175W QCR2P07257 368 aa3.84□□□□□ -1.8
CBF5YLR175W SPS100P13130 326 aa3.84□□□□□ -1.8
CBF5YLR175W CKA1P15790 372 aa3.84□□□□□ -1.8
CBF5YLR175W SEN2P16658 377 aa3.84□□□□□ -1.8
CBF5YLR175W CKS1P20486 150 aaKnown RBP3.84□□□□□ -1.8
CBF5YLR175W SUA5P32579 426 aa3.84□□□□□ -1.8
CBF5YLR175W VMA8P32610 256 aaKnown RBP3.84□□□□□ -1.8
CBF5YLR175W RPB7P34087 171 aa3.84□□□□□ -1.8
CBF5YLR175W YUH1P35127 236 aa3.84□□□□□ -1.8
CBF5YLR175W SWD3P38123 315 aa3.84□□□□□ -1.8
CBF5YLR175W FIG1P38224 298 aa3.84□□□□□ -1.8
CBF5YLR175W RPA34P47006 233 aaPredicted RBP3.84□□□□□ -1.8
CBF5YLR175W XPT1P47165 209 aa3.84□□□□□ -1.8
CBF5YLR175W PEF1P53238 335 aa3.84□□□□□ -1.8
CBF5YLR175W SLX9P53251 210 aaPredicted RBP3.84□□□□□ -1.8
CBF5YLR175W OKP1P53298 406 aa3.84□□□□□ -1.8
CBF5YLR175W TEX1P53851 422 aaKnown RBP3.84□□□□□ -1.8
CBF5YLR175W PRM15Q03262 622 aa3.84□□□□□ -1.8
CBF5YLR175W NGL2Q03264 515 aaKnown RBP3.84□□□□□ -1.8
CBF5YLR175W RTT103Q05543 409 aa3.84□□□□□ -1.8
CBF5YLR175W VAM3Q12241 283 aa3.84□□□□□ -1.8
CBF5YLR175W MED4Q12343 284 aa3.84□□□□□ -1.8
CBF5YLR175W YPR108W-AQ3E7B3 70 aa3.84□□□□□ -1.8
CBF5YLR175W YLL053CP0CD98 152 aa3.83□□□□□ -1.8
CBF5YLR175W ACB1P31787 87 aa3.83□□□□□ -1.8
CBF5YLR175W YKL187CP34231 750 aa3.83□□□□□ -1.8
CBF5YLR175W CPR5P35176 225 aa3.83□□□□□ -1.8
CBF5YLR175W SWD2P36104 329 aaPredicted RBP3.83□□□□□ -1.8
CBF5YLR175W ECM14P38836 430 aa3.83□□□□□ -1.8
CBF5YLR175W BFR1P38934 470 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
CBF5YLR175W SWM2P40342 146 aa3.83□□□□□ -1.8
CBF5YLR175W GLR1P41921 483 aaKnown RBP3.83□□□□□ -1.8
CBF5YLR175W MRPL50P53724 139 aa3.83□□□□□ -1.8
CBF5YLR175W CAB5Q03941 241 aa3.83□□□□□ -1.8
CBF5YLR175W THI74Q04083 370 aa3.83□□□□□ -1.8
CBF5YLR175W ECM18Q04623 453 aa3.83□□□□□ -1.8
CBF5YLR175W DGK1Q12382 290 aa3.83□□□□□ -1.8
CBF5YLR175W FRS1P15624 595 aaKnown RBP3.82□□□□□ -1.8
CBF5YLR175W APA2P22108 325 aa3.82□□□□□ -1.8
CBF5YLR175W PAC2P39937 518 aa3.82□□□□□ -1.8
CBF5YLR175W RPL13BP40212 199 aaKnown RBP3.82□□□□□ -1.8
CBF5YLR175W SGN1P40561 250 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
CBF5YLR175W QRI1P43123 477 aaKnown RBP3.82□□□□□ -1.8
CBF5YLR175W SBH2P52871 88 aa3.82□□□□□ -1.8
CBF5YLR175W GEP7P53171 287 aa3.82□□□□□ -1.8
CBF5YLR175W FIT1Q04433 528 aa3.82□□□□□ -1.8
CBF5YLR175W DPB4Q04603 196 aaKnown RBP3.82□□□□□ -1.8
CBF5YLR175W NOC4Q06512 552 aaPredicted RBP3.82□□□□□ -1.8
CBF5YLR175W STP4Q07351 490 aa3.82□□□□□ -1.8
CBF5YLR175W YOL029CQ08187 201 aa3.82□□□□□ -1.8
CBF5YLR175W YLR108CQ12259 485 aa3.82□□□□□ -1.8
CBF5YLR175W RPL13AQ12690 199 aaPredicted RBP3.82□□□□□ -1.8
CBF5YLR175W SPO24Q3E752 67 aa3.82□□□□□ -1.8
CBF5YLR175W TFB5Q3E7C1 72 aaPredicted RBP3.82□□□□□ -1.8
CBF5YLR175W ISN1Q99312 450 aa3.82□□□□□ -1.8
CBF5YLR175W BPH1P25356 2167 aa3.82□□□□□ -1.8
CBF5YLR175W TPI1P00942 248 aaKnown RBP3.81□□□□□ -1.8
CBF5YLR175W RPL39P04650 51 aa3.81□□□□□ -1.8
CBF5YLR175W MRP20P32387 263 aa3.81□□□□□ -1.8
CBF5YLR175W GAT2P40209 560 aa3.81□□□□□ -1.8
CBF5YLR175W SLM1P40485 686 aa3.81□□□□□ -1.8
CBF5YLR175W IRC24P40580 263 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 84 ms