RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C LPP1Q04396 274 aa1.76□□□□□ -2.13
YPT52YKR014C HSL1P34244 1518 aa1.76□□□□□ -2.13
YPT52YKR014C CHD1P32657 1468 aa1.75□□□□□ -2.13
YPT52YKR014C YIL177CP40434 1758 aa1.75□□□□□ -2.13
YPT52YKR014C YJL225CP40889 1758 aa1.75□□□□□ -2.13
YPT52YKR014C RAD9P14737 1309 aa1.75□□□□□ -2.13
YPT52YKR014C MSW1P04803 379 aa1.75□□□□□ -2.13
YPT52YKR014C PUT1P09368 476 aa1.75□□□□□ -2.13
YPT52YKR014C GRX2P17695 143 aaKnown RBP1.75□□□□□ -2.13
YPT52YKR014C TCA17P32613 152 aa1.75□□□□□ -2.13
YPT52YKR014C TRM5P38793 499 aa1.75□□□□□ -2.13
YPT52YKR014C CTR2P38865 189 aa1.75□□□□□ -2.13
YPT52YKR014C RMD6P39975 231 aa1.75□□□□□ -2.13
YPT52YKR014C YFR054CP43622 192 aa1.75□□□□□ -2.13
YPT52YKR014C TDA8Q6B2U8 126 aa1.75□□□□□ -2.13
YPT52YKR014C YCL012CQ8J0M4 134 aa1.75□□□□□ -2.13
YPT52YKR014C SAC3P46674 1301 aa1.74□□□□□ -2.13
YPT52YKR014C CDC8P00572 216 aa1.74□□□□□ -2.13
YPT52YKR014C SEC4P07560 215 aaKnown RBP1.74□□□□□ -2.13
YPT52YKR014C MER1P16523 270 aa1.74□□□□□ -2.13
YPT52YKR014C PTM1P32857 523 aa1.74□□□□□ -2.13
YPT52YKR014C POP4P38336 279 aa1.74□□□□□ -2.13
YPT52YKR014C YNL010WP53981 241 aaKnown RBP1.74□□□□□ -2.13
YPT52YKR014C PRM15Q03262 622 aa1.74□□□□□ -2.13
YPT52YKR014C GAS3Q03655 524 aa1.74□□□□□ -2.13
YPT52YKR014C ATG38Q05789 226 aaKnown RBP1.74□□□□□ -2.13
YPT52YKR014C MDM32Q12171 622 aa1.74□□□□□ -2.13
YPT52YKR014C BOL1Q3E793 110 aa1.74□□□□□ -2.13
YPT52YKR014C QCR7P00128 127 aa1.73□□□□□ -2.13
YPT52YKR014C RPL25P04456 142 aaKnown RBP1.73□□□□□ -2.13
YPT52YKR014C SKG1P36169 355 aa1.73□□□□□ -2.13
YPT52YKR014C AST2P39945 430 aaKnown RBP1.73□□□□□ -2.13
YPT52YKR014C YJL027CP47063 138 aaPredicted RBP1.73□□□□□ -2.13
YPT52YKR014C MMS2P53152 137 aa1.73□□□□□ -2.13
YPT52YKR014C LSM7P53905 115 aaKnown RBP1.73□□□□□ -2.13
YPT52YKR014C SNZ1Q03148 297 aa1.73□□□□□ -2.13
YPT52YKR014C TRM12Q04235 462 aa1.73□□□□□ -2.13
YPT52YKR014C PSF1Q12488 208 aa1.73□□□□□ -2.13
YPT52YKR014C YHR214C-EQ8TGK0 99 aa1.73□□□□□ -2.13
YPT52YKR014C SPA2P23201 1466 aaKnown RBP1.73□□□□□ -2.13
YPT52YKR014C SPT6P23615 1451 aaKnown RBP1.73□□□□□ -2.13
YPT52YKR014C REP2P03872 296 aa1.72□□□□□ -2.13
YPT52YKR014C CDC7P06243 507 aa1.72□□□□□ -2.13
YPT52YKR014C YLR156WP0CE96 114 aa1.72□□□□□ -2.13
YPT52YKR014C YLR159WP0CE97 114 aa1.72□□□□□ -2.13
YPT52YKR014C YLR161WP0CE98 114 aa1.72□□□□□ -2.13
YPT52YKR014C APA2P22108 325 aa1.72□□□□□ -2.13
YPT52YKR014C MRPL28P36527 147 aa1.72□□□□□ -2.13
YPT52YKR014C FCY21P40039 528 aa1.72□□□□□ -2.13
YPT52YKR014C YRB2P40517 327 aa1.72□□□□□ -2.13
YPT52YKR014C NEJ1Q06148 342 aa1.72□□□□□ -2.13
YPT52YKR014C ARR2Q06597 130 aa1.72□□□□□ -2.13
YPT52YKR014C ATO3Q12359 275 aa1.72□□□□□ -2.13
YPT52YKR014C THO2P53552 1597 aaKnown RBP1.72□□□□□ -2.13
YPT52YKR014C DNA2P38859 1522 aa1.71□□□□□ -2.14
YPT52YKR014C MAG1P22134 296 aaKnown RBP1.71□□□□□ -2.14
YPT52YKR014C MDH3P32419 343 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
YPT52YKR014C YHR180WP38868 163 aa1.71□□□□□ -2.14
YPT52YKR014C CIS3P47001 227 aa1.71□□□□□ -2.14
YPT52YKR014C AIF1P52923 378 aa1.71□□□□□ -2.14
YPT52YKR014C HOP2P53187 214 aa1.71□□□□□ -2.14
YPT52YKR014C YGR050CP53231 118 aa1.71□□□□□ -2.14
YPT52YKR014C YGR219WP53307 113 aa1.71□□□□□ -2.14
YPT52YKR014C PET191Q02772 108 aa1.71□□□□□ -2.14
YPT52YKR014C YPL162CQ12042 273 aa1.71□□□□□ -2.14
YPT52YKR014C HIR3P47171 1648 aa1.7□□□□□ -2.14
YPT52YKR014C ADE1P27616 306 aa1.7□□□□□ -2.14
YPT52YKR014C PEX4P29340 183 aa1.7□□□□□ -2.14
YPT52YKR014C HMF1P40037 129 aaKnown RBP1.7□□□□□ -2.14
YPT52YKR014C PRM10P42946 383 aa1.7□□□□□ -2.14
YPT52YKR014C AIM25P47140 327 aa1.7□□□□□ -2.14
YPT52YKR014C DAD3P69850 94 aa1.7□□□□□ -2.14
YPT52YKR014C GPM2Q12008 311 aa1.7□□□□□ -2.14
YPT52YKR014C IKI3Q06706 1349 aaKnown RBP1.69□□□□□ -2.14
YPT52YKR014C KSS1P14681 368 aa1.69□□□□□ -2.14
YPT52YKR014C MRPS28P21771 286 aa1.69□□□□□ -2.14
YPT52YKR014C SEC17P32602 292 aa1.69□□□□□ -2.14
YPT52YKR014C UTP30P36144 274 aaKnown RBP1.69□□□□□ -2.14
YPT52YKR014C PGD1P40356 397 aa1.69□□□□□ -2.14
YPT52YKR014C COG5P53951 403 aa1.69□□□□□ -2.14
YPT52YKR014C SWP1Q02795 286 aa1.69□□□□□ -2.14
YPT52YKR014C MRPS8Q03799 155 aa1.69□□□□□ -2.14
YPT52YKR014C SPG3Q04398 127 aaPredicted RBP1.69□□□□□ -2.14
YPT52YKR014C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
YPT52YKR014C YOL160WQ08321 113 aa1.69□□□□□ -2.14
YPT52YKR014C MCP1Q12106 302 aa1.69□□□□□ -2.14
YPT52YKR014C TSC3Q3E790 80 aa1.69□□□□□ -2.14
YPT52YKR014C BUD4P47136 1447 aa1.68□□□□□ -2.14
YPT52YKR014C SIN3P22579 1536 aa1.68□□□□□ -2.14
YPT52YKR014C SIR2P06700 562 aa1.68□□□□□ -2.14
YPT52YKR014C URA5P13298 226 aaKnown RBP1.68□□□□□ -2.14
YPT52YKR014C FBA1P14540 359 aaKnown RBP1.68□□□□□ -2.14
YPT52YKR014C BET1P22804 142 aa1.68□□□□□ -2.14
YPT52YKR014C MEI4P29467 408 aa1.68□□□□□ -2.14
YPT52YKR014C ASF2P32448 525 aaPredicted RBP1.68□□□□□ -2.14
YPT52YKR014C LSM4P40070 187 aaKnown RBP1.68□□□□□ -2.14
YPT52YKR014C RPL33BP41056 107 aaKnown RBP1.68□□□□□ -2.14
YPT52YKR014C TLG1Q03322 224 aa1.68□□□□□ -2.14
YPT52YKR014C YDR249CQ03787 373 aa1.68□□□□□ -2.14
YPT52YKR014C YNG1Q08465 219 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 59 ms