RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C HPT1Q04178 221 aaKnown RBP3.53□□□□□ -1.84
SPT23YKL020C WTM2Q12206 467 aa3.53□□□□□ -1.84
SPT23YKL020C STE7P06784 515 aa3.52□□□□□ -1.85
SPT23YKL020C SNF5P18480 905 aa3.52□□□□□ -1.85
SPT23YKL020C MIG1P27705 504 aa3.52□□□□□ -1.85
SPT23YKL020C MRPL11P36521 249 aaPredicted RBP3.52□□□□□ -1.85
SPT23YKL020C MET30P39014 640 aa3.52□□□□□ -1.85
SPT23YKL020C YNR040WP53736 256 aa3.52□□□□□ -1.85
SPT23YKL020C EST3Q03096 181 aa3.52□□□□□ -1.85
SPT23YKL020C GPB1Q08886 897 aa3.52□□□□□ -1.85
SPT23YKL020C PFA4Q12006 378 aa3.52□□□□□ -1.85
SPT23YKL020C TY1A-NL1Q12391 440 aaKnown RBP3.52□□□□□ -1.85
SPT23YKL020C DED1P06634 604 aaKnown RBP3.52□□□□□ -1.85
SPT23YKL020C RPS25BP0C0T4 108 aaKnown RBP3.52□□□□□ -1.85
SPT23YKL020C TKL1P23254 680 aaKnown RBP3.52□□□□□ -1.85
SPT23YKL020C TIR2P33890 251 aa3.52□□□□□ -1.85
SPT23YKL020C LSM2P38203 95 aaKnown RBP3.52□□□□□ -1.85
SPT23YKL020C VBA2P38358 474 aaKnown RBP3.52□□□□□ -1.85
SPT23YKL020C YHR210CP38893 341 aa3.52□□□□□ -1.85
SPT23YKL020C RPL13BP40212 199 aaKnown RBP3.52□□□□□ -1.85
SPT23YKL020C NIF3P53081 288 aa3.52□□□□□ -1.85
SPT23YKL020C MRX8Q05473 314 aa3.52□□□□□ -1.85
SPT23YKL020C CSI2Q08054 341 aa3.52□□□□□ -1.85
SPT23YKL020C ORT1Q12375 292 aa3.52□□□□□ -1.85
SPT23YKL020C RPS25AQ3E792 108 aaPredicted RBP3.52□□□□□ -1.85
SPT23YKL020C PMD1P32634 1753 aa3.52□□□□□ -1.85
SPT23YKL020C HIP1P06775 603 aa3.51□□□□□ -1.85
SPT23YKL020C GLN3P18494 730 aa3.51□□□□□ -1.85
SPT23YKL020C EMC3P36039 253 aa3.51□□□□□ -1.85
SPT23YKL020C RPL14BP38754 138 aaKnown RBP3.51□□□□□ -1.85
SPT23YKL020C EMC5P40540 141 aa3.51□□□□□ -1.85
SPT23YKL020C HAC1P41546 238 aa3.51□□□□□ -1.85
SPT23YKL020C PFS2P42841 465 aaKnown RBP3.51□□□□□ -1.85
SPT23YKL020C MSB3P48566 633 aaPredicted RBP3.51□□□□□ -1.85
SPT23YKL020C CRZ1P53968 678 aa3.51□□□□□ -1.85
SPT23YKL020C RCE1Q03530 315 aa3.51□□□□□ -1.85
SPT23YKL020C PAU23Q07987 124 aa3.51□□□□□ -1.85
SPT23YKL020C LDS2Q08218 356 aa3.51□□□□□ -1.85
SPT23YKL020C NAT5Q08689 176 aa3.51□□□□□ -1.85
SPT23YKL020C PAU17Q12370 124 aa3.51□□□□□ -1.85
SPT23YKL020C LAS17Q12446 633 aa3.51□□□□□ -1.85
SPT23YKL020C HIS1P00498 297 aaKnown RBP3.51□□□□□ -1.85
SPT23YKL020C POP5P28005 173 aa3.51□□□□□ -1.85
SPT23YKL020C COX13P32799 129 aa3.51□□□□□ -1.85
SPT23YKL020C PRS4P38063 326 aaPredicted RBP3.51□□□□□ -1.85
SPT23YKL020C YBR090CP38253 122 aa3.51□□□□□ -1.85
SPT23YKL020C YHR177WP38867 453 aa3.51□□□□□ -1.85
SPT23YKL020C COX18P53239 316 aa3.51□□□□□ -1.85
SPT23YKL020C YPR027CQ12079 277 aa3.51□□□□□ -1.85
SPT23YKL020C YJR112W-AQ3E743 109 aa3.51□□□□□ -1.85
SPT23YKL020C RPS31P05759 152 aaKnown RBP3.51□□□□□ -1.85
SPT23YKL020C RIP1P08067 215 aa3.51□□□□□ -1.85
SPT23YKL020C PAU19P0CE85 124 aa3.51□□□□□ -1.85
SPT23YKL020C PAU21P0CE86 164 aa3.51□□□□□ -1.85
SPT23YKL020C PAU22P0CE87 164 aa3.51□□□□□ -1.85
SPT23YKL020C UBI4P0CG63 381 aaKnown RBP3.51□□□□□ -1.85
SPT23YKL020C RPL40AP0CH08 128 aaKnown RBP3.51□□□□□ -1.85
SPT23YKL020C RPL40BP0CH09 128 aaKnown RBP3.51□□□□□ -1.85
SPT23YKL020C ANB1P19211 157 aa3.51□□□□□ -1.85
SPT23YKL020C PAU3P25610 124 aa3.51□□□□□ -1.85
SPT23YKL020C UTR5P32630 166 aa3.51□□□□□ -1.85
SPT23YKL020C RPS20P38701 121 aaKnown RBP3.51□□□□□ -1.85
SPT23YKL020C MEP2P41948 499 aa3.51□□□□□ -1.85
SPT23YKL020C TAM41P53230 385 aa3.51□□□□□ -1.85
SPT23YKL020C YIF1P53845 314 aaKnown RBP3.51□□□□□ -1.85
SPT23YKL020C APJ1P53940 528 aa3.51□□□□□ -1.85
SPT23YKL020C HHT1P61830 136 aa3.51□□□□□ -1.85
SPT23YKL020C BSC1Q12140 328 aa3.51□□□□□ -1.85
SPT23YKL020C TIR4Q12218 487 aaPredicted RBP3.51□□□□□ -1.85
SPT23YKL020C PAI3P01094 68 aa3.5□□□□□ -1.85
SPT23YKL020C RPB8P20436 146 aa3.5□□□□□ -1.85
SPT23YKL020C EMP70P32802 667 aa3.5□□□□□ -1.85
SPT23YKL020C KTI12P34253 313 aaKnown RBP3.5□□□□□ -1.85
SPT23YKL020C SPT23P35210 1082 aa3.5□□□□□ -1.85
SPT23YKL020C YIR007WP40566 764 aa3.5□□□□□ -1.85
SPT23YKL020C YPS6P40583 537 aa3.5□□□□□ -1.85
SPT23YKL020C MUP1P50276 574 aa3.5□□□□□ -1.85
SPT23YKL020C RSM23Q01163 450 aa3.5□□□□□ -1.85
SPT23YKL020C TSA2Q04120 196 aa3.5□□□□□ -1.85
SPT23YKL020C BSP1Q06604 576 aa3.5□□□□□ -1.85
SPT23YKL020C YFH1Q07540 174 aa3.5□□□□□ -1.85
SPT23YKL020C COX19Q3E731 98 aa3.5□□□□□ -1.85
SPT23YKL020C STT4P37297 1900 aa3.5□□□□□ -1.85
SPT23YKL020C MBF1O14467 151 aaKnown RBP3.5□□□□□ -1.85
SPT23YKL020C TY2A-FP0CX61 438 aa3.5□□□□□ -1.85
SPT23YKL020C TY2A-GR2P0CX62 438 aa3.5□□□□□ -1.85
SPT23YKL020C FCY2P17064 533 aa3.5□□□□□ -1.85
SPT23YKL020C GPI12P23797 304 aa3.5□□□□□ -1.85
SPT23YKL020C FUB1P25659 250 aa3.5□□□□□ -1.85
SPT23YKL020C PCL2P25693 308 aa3.5□□□□□ -1.85
SPT23YKL020C PAD1P33751 242 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SPT23YKL020C SAF1P38352 637 aa3.5□□□□□ -1.85
SPT23YKL020C CUE1P38428 203 aa3.5□□□□□ -1.85
SPT23YKL020C NDT80P38830 627 aa3.5□□□□□ -1.85
SPT23YKL020C CAT5P41735 233 aa3.5□□□□□ -1.85
SPT23YKL020C CDH1P53197 566 aa3.5□□□□□ -1.85
SPT23YKL020C YMR074CQ04773 145 aa3.5□□□□□ -1.85
SPT23YKL020C KEI1Q06346 221 aa3.5□□□□□ -1.85
SPT23YKL020C ADK1P07170 222 aaKnown RBP3.49□□□□□ -1.85
SPT23YKL020C TY2A-LR1P0C2J4 438 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms