RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W FMP27Q06179 2628 aa0.86□□□□□ -2.27
URM1YIL008W CUP1-1P0CX80 61 aa0.86□□□□□ -2.27
URM1YIL008W CUP1-2P0CX81 61 aa0.86□□□□□ -2.27
URM1YIL008W SNA3P14359 133 aa0.86□□□□□ -2.27
URM1YIL008W GRX2P17695 143 aaKnown RBP0.86□□□□□ -2.27
URM1YIL008W SGE1P33335 543 aa0.86□□□□□ -2.27
URM1YIL008W GOS1P38736 223 aa0.86□□□□□ -2.27
URM1YIL008W YHR180WP38868 163 aa0.86□□□□□ -2.27
URM1YIL008W AGE2P40529 298 aa0.86□□□□□ -2.27
URM1YIL008W YNR062CP53748 327 aa0.86□□□□□ -2.27
URM1YIL008W YDR209CQ03480 137 aa0.86□□□□□ -2.27
URM1YIL008W COX20Q04935 205 aa0.86□□□□□ -2.27
URM1YIL008W ATG39Q06159 398 aa0.86□□□□□ -2.27
URM1YIL008W HEM25Q07534 307 aa0.86□□□□□ -2.27
URM1YIL008W RIM15P43565 1770 aa0.85□□□□□ -2.27
URM1YIL008W IPP1P00817 287 aaKnown RBP0.85□□□□□ -2.27
URM1YIL008W RPL2AP0CX45 254 aaKnown RBP0.85□□□□□ -2.27
URM1YIL008W RPL2BP0CX46 254 aaKnown RBP0.85□□□□□ -2.27
URM1YIL008W POL30P15873 258 aaKnown RBP0.85□□□□□ -2.27
URM1YIL008W YPT52P36018 234 aaKnown RBP0.85□□□□□ -2.27
URM1YIL008W YBR096WP38256 230 aa0.85□□□□□ -2.27
URM1YIL008W SVP26P38869 228 aa0.85□□□□□ -2.27
URM1YIL008W YIL001WP40560 513 aa0.85□□□□□ -2.27
URM1YIL008W GLG2P47011 380 aa0.85□□□□□ -2.27
URM1YIL008W SML1Q04964 104 aa0.85□□□□□ -2.27
URM1YIL008W YLR162WQ06235 118 aa0.85□□□□□ -2.27
URM1YIL008W HTL1Q9URQ5 78 aa0.85□□□□□ -2.27
URM1YIL008W YIL177CP40434 1758 aa0.85□□□□□ -2.27
URM1YIL008W YJL225CP40889 1758 aa0.85□□□□□ -2.27
URM1YIL008W FIG2P25653 1609 aa0.85□□□□□ -2.27
URM1YIL008W TUS1Q06412 1307 aa0.85□□□□□ -2.27
URM1YIL008W ACC1Q00955 2233 aaKnown RBP0.84□□□□□ -2.27
URM1YIL008W PMD1P32634 1753 aa0.84□□□□□ -2.27
URM1YIL008W PET9P18239 318 aaKnown RBP0.84□□□□□ -2.27
URM1YIL008W MRPL37P36532 105 aa0.84□□□□□ -2.27
URM1YIL008W USE1P53146 245 aa0.84□□□□□ -2.27
URM1YIL008W TOS8P53147 276 aa0.84□□□□□ -2.27
URM1YIL008W YNL046WP53956 172 aa0.84□□□□□ -2.27
URM1YIL008W RRS1Q08746 203 aaKnown RBP0.84□□□□□ -2.27
URM1YIL008W TPO4Q12256 659 aa0.84□□□□□ -2.27
URM1YIL008W UTP20P35194 2493 aaKnown RBP0.84□□□□□ -2.28
URM1YIL008W GSC2P40989 1895 aa0.84□□□□□ -2.28
URM1YIL008W RPL40AP0CH08 128 aaKnown RBP0.83□□□□□ -2.28
URM1YIL008W RPL40BP0CH09 128 aaKnown RBP0.83□□□□□ -2.28
URM1YIL008W RNA15P25299 296 aaPredicted RBP0.83□□□□□ -2.28
URM1YIL008W UPS2P35200 230 aa0.83□□□□□ -2.28
URM1YIL008W RPF1P38805 295 aaKnown RBP0.83□□□□□ -2.28
URM1YIL008W YAR068WP39564 161 aa0.83□□□□□ -2.28
URM1YIL008W RPL13BP40212 199 aaKnown RBP0.83□□□□□ -2.28
URM1YIL008W MEP1P40260 492 aa0.83□□□□□ -2.28
URM1YIL008W YJR056CP47115 236 aa0.83□□□□□ -2.28
URM1YIL008W JHD2P47156 728 aaPredicted RBP0.83□□□□□ -2.28
URM1YIL008W RPL13AQ12690 199 aaPredicted RBP0.83□□□□□ -2.28
URM1YIL008W YDR524C-BQ3E6R4 66 aa0.83□□□□□ -2.28
URM1YIL008W YOR020W-AQ3E824 90 aa0.83□□□□□ -2.28
URM1YIL008W FLO1P32768 1537 aa0.83□□□□□ -2.28
URM1YIL008W FLO9P39712 1322 aa0.83□□□□□ -2.28
URM1YIL008W PRP8P33334 2413 aaKnown RBP0.83□□□□□ -2.28
URM1YIL008W IRA1P18963 3092 aa0.83□□□□□ -2.28
URM1YIL008W RTR1P40084 226 aaPredicted RBP0.82□□□□□ -2.28
URM1YIL008W YFH7P43591 353 aa0.82□□□□□ -2.28
URM1YIL008W RPA43P46669 326 aa0.82□□□□□ -2.28
URM1YIL008W ERV29P53337 310 aa0.82□□□□□ -2.28
URM1YIL008W RHO3Q00245 231 aaKnown RBP0.82□□□□□ -2.28
URM1YIL008W NIP7Q08962 181 aaKnown RBP0.82□□□□□ -2.28
URM1YIL008W YCT1Q12235 531 aa0.82□□□□□ -2.28
URM1YIL008W SNU23Q12368 194 aaPredicted RBP0.82□□□□□ -2.28
URM1YIL008W HKR1P41809 1802 aa0.81□□□□□ -2.28
URM1YIL008W MSF1P08425 469 aa0.81□□□□□ -2.28
URM1YIL008W OM45P16547 393 aa0.81□□□□□ -2.28
URM1YIL008W FCY2P17064 533 aa0.81□□□□□ -2.28
URM1YIL008W ERD2P18414 219 aa0.81□□□□□ -2.28
URM1YIL008W ECM33P38248 429 aaKnown RBP0.81□□□□□ -2.28
URM1YIL008W YHR127WP38833 243 aaKnown RBP0.81□□□□□ -2.28
URM1YIL008W BFR1P38934 470 aaKnown RBP RIP-Chip data0.81□□□□□ -2.28not detected
URM1YIL008W TIR3P40552 269 aa0.81□□□□□ -2.28
URM1YIL008W RPL33BP41056 107 aaKnown RBP0.81□□□□□ -2.28
URM1YIL008W HAM1P47119 197 aaKnown RBP0.81□□□□□ -2.28
URM1YIL008W SDO1Q07953 250 aaKnown RBP0.81□□□□□ -2.28
URM1YIL008W CSM4Q08955 156 aa0.81□□□□□ -2.28
URM1YIL008W CSF1Q12150 2958 aa0.81□□□□□ -2.28
URM1YIL008W RIO1Q12196 484 aaKnown RBP0.81□□□□□ -2.28
URM1YIL008W TRA1P38811 3744 aa0.8□□□□□ -2.28
URM1YIL008W GPA2P10823 449 aa0.8□□□□□ -2.28
URM1YIL008W RSR1P13856 272 aa0.8□□□□□ -2.28
URM1YIL008W RPS5P26783 225 aaKnown RBP0.8□□□□□ -2.28
URM1YIL008W YBR063CP38083 404 aa0.8□□□□□ -2.28
URM1YIL008W BIG1P38813 335 aa0.8□□□□□ -2.28
URM1YIL008W RSM25P40496 264 aa0.8□□□□□ -2.28
URM1YIL008W CAT5P41735 233 aa0.8□□□□□ -2.28
URM1YIL008W ILM1P47155 203 aa0.8□□□□□ -2.28
URM1YIL008W SEI1Q06058 285 aa0.8□□□□□ -2.28
URM1YIL008W MSA1Q08471 629 aa0.8□□□□□ -2.28
URM1YIL008W BTS1Q12051 335 aa0.8□□□□□ -2.28
URM1YIL008W MEC1P38111 2368 aa0.8□□□□□ -2.28
URM1YIL008W SAC3P46674 1301 aa0.8□□□□□ -2.28
URM1YIL008W UTP10P42945 1769 aaKnown RBP0.8□□□□□ -2.28
URM1YIL008W CDC8P00572 216 aa0.79□□□□□ -2.28
URM1YIL008W MEI4P29467 408 aa0.79□□□□□ -2.28
URM1YIL008W YKL075CP36083 450 aa0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms