RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W VPS71Q03433 280 aa3.91□□□□□ -1.78
VPS29YHR012W GRX3Q03835 250 aa3.91□□□□□ -1.78
VPS29YHR012W ASR1Q06834 288 aa3.91□□□□□ -1.78
VPS29YHR012W HEM25Q07534 307 aa3.91□□□□□ -1.78
VPS29YHR012W YPD1Q07688 167 aa3.91□□□□□ -1.78
VPS29YHR012W NGL1Q08213 363 aaKnown RBP3.91□□□□□ -1.78
VPS29YHR012W PRM3Q08931 133 aa3.91□□□□□ -1.78
VPS29YHR012W ALG6Q12001 544 aaKnown RBP3.91□□□□□ -1.78
VPS29YHR012W YEL009C-AA0A023PZF2 135 aa3.9□□□□□ -1.79
VPS29YHR012W RNA14P25298 677 aaKnown RBP3.9□□□□□ -1.79
VPS29YHR012W LSB5P25369 354 aa3.9□□□□□ -1.79
VPS29YHR012W INO2P26798 304 aa3.9□□□□□ -1.79
VPS29YHR012W CNE1P27825 502 aa3.9□□□□□ -1.79
VPS29YHR012W ERG3P32353 365 aa3.9□□□□□ -1.79
VPS29YHR012W ARO4P32449 370 aaKnown RBP3.9□□□□□ -1.79
VPS29YHR012W YBR144CP34215 104 aa3.9□□□□□ -1.79
VPS29YHR012W SWD3P38123 315 aa3.9□□□□□ -1.79
VPS29YHR012W GPX2P38143 162 aa3.9□□□□□ -1.79
VPS29YHR012W YHK8P38776 514 aa3.9□□□□□ -1.79
VPS29YHR012W PCL6P40038 420 aa3.9□□□□□ -1.79
VPS29YHR012W FCY21P40039 528 aa3.9□□□□□ -1.79
VPS29YHR012W YFL015CP43578 164 aa3.9□□□□□ -1.79
VPS29YHR012W RPA43P46669 326 aa3.9□□□□□ -1.79
VPS29YHR012W YJL118WP47022 219 aa3.9□□□□□ -1.79
VPS29YHR012W GWT1P47026 490 aa3.9□□□□□ -1.79
VPS29YHR012W GPI14P47088 403 aaKnown RBP3.9□□□□□ -1.79
VPS29YHR012W IMD3P50095 523 aaKnown RBP3.9□□□□□ -1.79
VPS29YHR012W SOL1P50278 321 aa3.9□□□□□ -1.79
VPS29YHR012W CWC23P52868 283 aaPredicted RBP3.9□□□□□ -1.79
VPS29YHR012W RAI1P53063 387 aaKnown RBP3.9□□□□□ -1.79
VPS29YHR012W YGR151CP53287 111 aa3.9□□□□□ -1.79
VPS29YHR012W TDA1Q03533 586 aa3.9□□□□□ -1.79
VPS29YHR012W RCF1Q03713 159 aa3.9□□□□□ -1.79
VPS29YHR012W YDL086WQ07505 273 aa3.9□□□□□ -1.79
VPS29YHR012W FCY1Q12178 158 aa3.9□□□□□ -1.79
VPS29YHR012W JID1Q12350 301 aa3.9□□□□□ -1.79
VPS29YHR012W ATO3Q12359 275 aa3.9□□□□□ -1.79
VPS29YHR012W GRX2P17695 143 aaKnown RBP3.89□□□□□ -1.79
VPS29YHR012W OLE1P21147 510 aaKnown RBP3.89□□□□□ -1.79
VPS29YHR012W VAM7P32912 316 aa3.89□□□□□ -1.79
VPS29YHR012W YUH1P35127 236 aa3.89□□□□□ -1.79
VPS29YHR012W UTP30P36144 274 aaKnown RBP3.89□□□□□ -1.79
VPS29YHR012W SRL3P36167 246 aa3.89□□□□□ -1.79
VPS29YHR012W RFC2P40348 353 aa3.89□□□□□ -1.79
VPS29YHR012W VPS55P47111 140 aa3.89□□□□□ -1.79
VPS29YHR012W BXI1P48558 297 aa3.89□□□□□ -1.79
VPS29YHR012W RPL9BP51401 191 aaKnown RBP3.89□□□□□ -1.79
VPS29YHR012W YGL262WP53054 175 aa3.89□□□□□ -1.79
VPS29YHR012W DOC1P53068 250 aa3.89□□□□□ -1.79
VPS29YHR012W FMP48P53233 369 aa3.89□□□□□ -1.79
VPS29YHR012W SLX9P53251 210 aaPredicted RBP3.89□□□□□ -1.79
VPS29YHR012W CAB4P53332 305 aa3.89□□□□□ -1.79
VPS29YHR012W CPR8P53728 308 aa3.89□□□□□ -1.79
VPS29YHR012W HOF1Q05080 669 aa3.89□□□□□ -1.79
VPS29YHR012W HOR7Q05827 59 aa3.89□□□□□ -1.79
VPS29YHR012W YOS1Q3E834 85 aa3.89□□□□□ -1.79
VPS29YHR012W TDH1P00360 332 aaKnown RBP3.88□□□□□ -1.79
VPS29YHR012W HIS3P06633 220 aa3.88□□□□□ -1.79
VPS29YHR012W YHR212W-AP0CX91 67 aa3.88□□□□□ -1.79
VPS29YHR012W BUD23P25627 275 aaPredicted RBP3.88□□□□□ -1.79
VPS29YHR012W VMA5P31412 392 aaKnown RBP3.88□□□□□ -1.79
VPS29YHR012W SPS18P32572 300 aa3.88□□□□□ -1.79
VPS29YHR012W SER2P42941 309 aa3.88□□□□□ -1.79
VPS29YHR012W FIP1P45976 327 aa3.88□□□□□ -1.79
VPS29YHR012W LPP1Q04396 274 aa3.88□□□□□ -1.79
VPS29YHR012W DPB4Q04603 196 aaKnown RBP3.88□□□□□ -1.79
VPS29YHR012W PEX10Q05568 337 aa3.88□□□□□ -1.79
VPS29YHR012W TFC7Q12415 435 aa3.88□□□□□ -1.79
VPS29YHR012W TY1A-LR4P0C2I8 440 aaKnown RBP3.87□□□□□ -1.79
VPS29YHR012W TY1A-DR6P0CX70 440 aa3.87□□□□□ -1.79
VPS29YHR012W TY1A-ER1P0CX71 440 aa3.87□□□□□ -1.79
VPS29YHR012W TY1A-LR2P0CX72 440 aa3.87□□□□□ -1.79
VPS29YHR012W TY1A-PLP0CX73 440 aa3.87□□□□□ -1.79
VPS29YHR012W TY1A-JR1P0CX74 440 aa3.87□□□□□ -1.79
VPS29YHR012W TY1A-LR3P0CX75 440 aa3.87□□□□□ -1.79
VPS29YHR012W TY1A-ML2P0CX76 440 aa3.87□□□□□ -1.79
VPS29YHR012W GCN3P14741 305 aa3.87□□□□□ -1.79
VPS29YHR012W URA6P15700 204 aa3.87□□□□□ -1.79
VPS29YHR012W OCH1P31755 480 aa3.87□□□□□ -1.79
VPS29YHR012W MRP20P32387 263 aa3.87□□□□□ -1.79
VPS29YHR012W MSS1P32559 526 aaPredicted RBP3.87□□□□□ -1.79
VPS29YHR012W IKI1P38874 309 aa3.87□□□□□ -1.79
VPS29YHR012W SSO2P39926 295 aa3.87□□□□□ -1.79
VPS29YHR012W PHM8P40025 321 aa3.87□□□□□ -1.79
VPS29YHR012W YJL218WP40892 196 aaKnown RBP3.87□□□□□ -1.79
VPS29YHR012W PAM16P42949 149 aa3.87□□□□□ -1.79
VPS29YHR012W ERG25P53045 309 aa3.87□□□□□ -1.79
VPS29YHR012W IMO32P53219 342 aa3.87□□□□□ -1.79
VPS29YHR012W GIM3P53900 129 aa3.87□□□□□ -1.79
VPS29YHR012W TSA2Q04120 196 aa3.87□□□□□ -1.79
VPS29YHR012W YDR286CQ05530 114 aa3.87□□□□□ -1.79
VPS29YHR012W NDE2Q07500 545 aa3.87□□□□□ -1.79
VPS29YHR012W YNG1Q08465 219 aa3.87□□□□□ -1.79
VPS29YHR012W TY1A-GR1Q12085 440 aa3.87□□□□□ -1.79
VPS29YHR012W SWT1Q12104 458 aa3.87□□□□□ -1.79
VPS29YHR012W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.87□□□□□ -1.79
VPS29YHR012W TY1A-OLQ92392 440 aaKnown RBP3.87□□□□□ -1.79
VPS29YHR012W ODC2Q99297 307 aa3.87□□□□□ -1.79
VPS29YHR012W GAL1P04385 528 aa3.86□□□□□ -1.79
VPS29YHR012W CHO1P08456 276 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 86.6 ms