RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C YOR283WQ12040 230 aaKnown RBP10.66□□□□□ -0.7
SHU1YHL006C MSH5Q12175 901 aa10.66□□□□□ -0.7
SHU1YHL006C IES3Q12345 250 aa10.66□□□□□ -0.7
SHU1YHL006C MSS1P32559 526 aaPredicted RBP10.65□□□□□ -0.7
SHU1YHL006C SPS18P32572 300 aa10.65□□□□□ -0.7
SHU1YHL006C RIB7P33312 244 aa10.65□□□□□ -0.7
SHU1YHL006C IES5P40060 125 aa10.65□□□□□ -0.7
SHU1YHL006C YFL054CP43549 646 aa10.65□□□□□ -0.7
SHU1YHL006C YIP1P53039 248 aa10.65□□□□□ -0.7
SHU1YHL006C TSA2Q04120 196 aa10.65□□□□□ -0.7
SHU1YHL006C ASM4Q05166 528 aa10.65□□□□□ -0.7
SHU1YHL006C JID1Q12350 301 aa10.65□□□□□ -0.7
SHU1YHL006C PET54P10834 293 aa10.64□□□□□ -0.71
SHU1YHL006C SEN2P16658 377 aa10.64□□□□□ -0.71
SHU1YHL006C RNP1P32385 249 aa10.64□□□□□ -0.71
SHU1YHL006C IKI1P38874 309 aa10.64□□□□□ -0.71
SHU1YHL006C NOP16P40007 231 aaKnown RBP10.64□□□□□ -0.71
SHU1YHL006C YLR031WQ07978 186 aa10.64□□□□□ -0.71
SHU1YHL006C YOR292CQ08743 309 aa10.64□□□□□ -0.71
SHU1YHL006C YPR108W-AQ3E7B3 70 aa10.64□□□□□ -0.71
SHU1YHL006C LSB5P25369 354 aa10.63□□□□□ -0.71
SHU1YHL006C FEN2P25621 512 aaKnown RBP10.63□□□□□ -0.71
SHU1YHL006C YUH1P35127 236 aa10.63□□□□□ -0.71
SHU1YHL006C BMT5P40493 336 aa10.63□□□□□ -0.71
SHU1YHL006C ALG9P53868 555 aaKnown RBP10.63□□□□□ -0.71
SHU1YHL006C MRPL22P53881 309 aa10.63□□□□□ -0.71
SHU1YHL006C INO2P26798 304 aa10.62□□□□□ -0.71
SHU1YHL006C MRP20P32387 263 aa10.62□□□□□ -0.71
SHU1YHL006C MBA1P38300 278 aa10.62□□□□□ -0.71
SHU1YHL006C PCL7P40186 285 aa10.62□□□□□ -0.71
SHU1YHL006C PUS4P48567 403 aaKnown RBP10.62□□□□□ -0.71
SHU1YHL006C MCM21Q06675 368 aa10.62□□□□□ -0.71
SHU1YHL006C SOG2Q08817 791 aa10.62□□□□□ -0.71
SHU1YHL006C CKA1P15790 372 aa10.61□□□□□ -0.71
SHU1YHL006C YML018CQ03730 393 aa10.61□□□□□ -0.71
SHU1YHL006C LPP1Q04396 274 aa10.61□□□□□ -0.71
SHU1YHL006C MCH1Q07376 486 aa10.61□□□□□ -0.71
SHU1YHL006C AEP3Q12089 606 aa10.61□□□□□ -0.71
SHU1YHL006C LAS17Q12446 633 aa10.61□□□□□ -0.71
SHU1YHL006C DCP1Q12517 231 aaPredicted RBP10.61□□□□□ -0.71
SHU1YHL006C GAL1P04385 528 aa10.6□□□□□ -0.71
SHU1YHL006C DIT1P21623 536 aa10.6□□□□□ -0.71
SHU1YHL006C RAD23P32628 398 aaKnown RBP10.6□□□□□ -0.71
SHU1YHL006C FMT1P32785 401 aa10.6□□□□□ -0.71
SHU1YHL006C YHR122WP38829 231 aa10.6□□□□□ -0.71
SHU1YHL006C FCY21P40039 528 aa10.6□□□□□ -0.71
SHU1YHL006C RPL9BP51401 191 aaKnown RBP10.6□□□□□ -0.71
SHU1YHL006C VPS71Q03433 280 aa10.6□□□□□ -0.71
SHU1YHL006C MRPL27P36526 146 aaPredicted RBP10.59□□□□□ -0.71
SHU1YHL006C YHK8P38776 514 aa10.59□□□□□ -0.71
SHU1YHL006C HPA3P39979 161 aa10.59□□□□□ -0.71
SHU1YHL006C FMP42Q04991 504 aa10.59□□□□□ -0.71
SHU1YHL006C YDL086WQ07505 273 aa10.59□□□□□ -0.71
SHU1YHL006C MED4Q12343 284 aa10.59□□□□□ -0.71
SHU1YHL006C UBA3Q99344 299 aa10.59□□□□□ -0.71
SHU1YHL006C RPA43P46669 326 aa10.58□□□□□ -0.72
SHU1YHL006C HUG1Q6Q5K6 68 aa10.58□□□□□ -0.72
SHU1YHL006C PUP1P25043 261 aa10.57□□□□□ -0.72
SHU1YHL006C ROX3P25046 220 aa10.57□□□□□ -0.72
SHU1YHL006C POP2P39008 433 aa10.57□□□□□ -0.72
SHU1YHL006C IRC18P47056 224 aa10.57□□□□□ -0.72
SHU1YHL006C CDC23P16522 626 aa10.56□□□□□ -0.72
SHU1YHL006C MIG1P27705 504 aa10.56□□□□□ -0.72
SHU1YHL006C TRR1P29509 319 aaKnown RBP10.56□□□□□ -0.72
SHU1YHL006C SEC66P33754 206 aa10.56□□□□□ -0.72
SHU1YHL006C PRS4P38063 326 aaPredicted RBP10.56□□□□□ -0.72
SHU1YHL006C SER2P42941 309 aa10.56□□□□□ -0.72
SHU1YHL006C VPS55P47111 140 aa10.56□□□□□ -0.72
SHU1YHL006C NRG1Q03125 231 aa10.56□□□□□ -0.72
SHU1YHL006C TY1A-MR1Q04215 440 aa10.56□□□□□ -0.72
SHU1YHL006C RGC1Q06108 1083 aaKnown RBP10.56□□□□□ -0.72
SHU1YHL006C YFH1Q07540 174 aa10.56□□□□□ -0.72
SHU1YHL006C MRPL23Q12487 163 aaPredicted RBP10.56□□□□□ -0.72
SHU1YHL006C PET20Q99373 253 aa10.56□□□□□ -0.72
SHU1YHL006C RPL9AP05738 191 aaKnown RBP10.55□□□□□ -0.72
SHU1YHL006C YKR045CP36138 183 aa10.55□□□□□ -0.72
SHU1YHL006C MIT1P40002 666 aa10.55□□□□□ -0.72
SHU1YHL006C RPA34P47006 233 aaPredicted RBP10.55□□□□□ -0.72
SHU1YHL006C YML122CQ03207 126 aa10.55□□□□□ -0.72
SHU1YHL006C NGL1Q08213 363 aaKnown RBP10.55□□□□□ -0.72
SHU1YHL006C MIR1P23641 311 aaKnown RBP10.54□□□□□ -0.72
SHU1YHL006C RNA14P25298 677 aaKnown RBP10.54□□□□□ -0.72
SHU1YHL006C FLO10P36170 1169 aa10.54□□□□□ -0.72
SHU1YHL006C TY1A-DR2Q03964 440 aaKnown RBP10.54□□□□□ -0.72
SHU1YHL006C SYM1Q06563 197 aa10.54□□□□□ -0.72
SHU1YHL006C YMR31P19955 123 aa10.53□□□□□ -0.72
SHU1YHL006C PHM8P40025 321 aa10.53□□□□□ -0.72
SHU1YHL006C CWC23P52868 283 aaPredicted RBP10.53□□□□□ -0.72
SHU1YHL006C RSM27P53305 110 aa10.53□□□□□ -0.72
SHU1YHL006C HOR7Q05827 59 aa10.53□□□□□ -0.72
SHU1YHL006C BOL1Q3E793 110 aa10.53□□□□□ -0.72
SHU1YHL006C GLY1P37303 387 aaKnown RBP10.52□□□□□ -0.73
SHU1YHL006C GPP2P40106 250 aaKnown RBP10.52□□□□□ -0.73
SHU1YHL006C YJL213WP40896 331 aa10.52□□□□□ -0.73
SHU1YHL006C RAI1P53063 387 aaKnown RBP10.52□□□□□ -0.73
SHU1YHL006C MRPL13Q02204 264 aa10.52□□□□□ -0.73
SHU1YHL006C MDN1Q12019 4910 aaKnown RBP10.52□□□□□ -0.73
SHU1YHL006C YOR385WQ08909 290 aa10.51□□□□□ -0.73
SHU1YHL006C OLE1P21147 510 aaKnown RBP10.5□□□□□ -0.73
SHU1YHL006C SRY1P36007 326 aa10.5□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms