RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C SEN34P39707 275 aa1.85□□□□□ -2.11
UBR1YGR184C EDC2P40023 145 aaPredicted RBP1.85□□□□□ -2.11
UBR1YGR184C TIF34P40217 347 aaKnown RBP1.85□□□□□ -2.11
UBR1YGR184C TPC1P53257 314 aa1.85□□□□□ -2.11
UBR1YGR184C HNT1Q04344 158 aaKnown RBP1.85□□□□□ -2.11
UBR1YGR184C ISD11Q6Q560 94 aa1.85□□□□□ -2.11
UBR1YGR184C EPT1P22140 391 aa1.84□□□□□ -2.11
UBR1YGR184C ATG15P25641 520 aa1.84□□□□□ -2.11
UBR1YGR184C NVJ1P38881 321 aa1.84□□□□□ -2.11
UBR1YGR184C SYF2P53277 215 aaPredicted RBP1.84□□□□□ -2.11
UBR1YGR184C NUP188P52593 1655 aaKnown RBP1.84□□□□□ -2.11
UBR1YGR184C CDC28P00546 298 aaKnown RBP1.84□□□□□ -2.11
UBR1YGR184C PEX34P25584 144 aa1.84□□□□□ -2.11
UBR1YGR184C SEO1P39709 593 aa1.84□□□□□ -2.11
UBR1YGR184C NQM1P53228 333 aaPredicted RBP1.84□□□□□ -2.11
UBR1YGR184C GTR2P53290 341 aa1.84□□□□□ -2.11
UBR1YGR184C SNO1Q03144 224 aa1.84□□□□□ -2.11
UBR1YGR184C YPL150WQ12152 901 aa1.84□□□□□ -2.11
UBR1YGR184C AHC2P25649 128 aa1.84□□□□□ -2.11
UBR1YGR184C CDC50P25656 391 aa1.84□□□□□ -2.11
UBR1YGR184C ASP1P38986 381 aaPredicted RBP1.84□□□□□ -2.11
UBR1YGR184C SKI6P46948 246 aaPredicted RBP1.84□□□□□ -2.11
UBR1YGR184C SBH2P52871 88 aa1.84□□□□□ -2.11
UBR1YGR184C YGL262WP53054 175 aa1.84□□□□□ -2.11
UBR1YGR184C GRX5Q02784 150 aa1.84□□□□□ -2.11
UBR1YGR184C MRX11Q03079 207 aa1.84□□□□□ -2.11
UBR1YGR184C USB1Q12208 290 aaKnown RBP1.84□□□□□ -2.11
UBR1YGR184C HTL1Q9URQ5 78 aa1.84□□□□□ -2.11
UBR1YGR184C RPS19AP07280 144 aaKnown RBP1.84□□□□□ -2.12
UBR1YGR184C RPS19BP07281 144 aaPredicted RBP1.84□□□□□ -2.12
UBR1YGR184C YBR063CP38083 404 aa1.84□□□□□ -2.12
UBR1YGR184C UBC12P52491 188 aa1.84□□□□□ -2.12
UBR1YGR184C GRX8Q05926 109 aa1.84□□□□□ -2.12
UBR1YGR184C YOR292CQ08743 309 aa1.84□□□□□ -2.12
UBR1YGR184C YOR283WQ12040 230 aaKnown RBP1.84□□□□□ -2.12
UBR1YGR184C MPD1Q12404 318 aaKnown RBP1.84□□□□□ -2.12
UBR1YGR184C PET20Q99373 253 aa1.84□□□□□ -2.12
UBR1YGR184C CHC1P22137 1653 aaKnown RBP1.84□□□□□ -2.12
UBR1YGR184C CPA1P07258 411 aaKnown RBP1.84□□□□□ -2.12
UBR1YGR184C SEC22P22214 214 aa1.84□□□□□ -2.12
UBR1YGR184C MDH3P32419 343 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
UBR1YGR184C MET30P39014 640 aa1.84□□□□□ -2.12
UBR1YGR184C RIO2P40160 425 aaKnown RBP1.84□□□□□ -2.12
UBR1YGR184C MIG2P53035 382 aa1.84□□□□□ -2.12
UBR1YGR184C TOS8P53147 276 aa1.84□□□□□ -2.12
UBR1YGR184C YEL009C-AA0A023PZF2 135 aa1.83□□□□□ -2.12
UBR1YGR184C MRS1P07266 363 aa1.83□□□□□ -2.12
UBR1YGR184C GPA2P10823 449 aa1.83□□□□□ -2.12
UBR1YGR184C FRM2P37261 193 aa1.83□□□□□ -2.12
UBR1YGR184C ECM13P38195 257 aa1.83□□□□□ -2.12
UBR1YGR184C HEK2P38199 381 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
UBR1YGR184C TDA4P47153 279 aa1.83□□□□□ -2.12
UBR1YGR184C SCW4P53334 386 aaKnown RBP1.83□□□□□ -2.12
UBR1YGR184C TRM12Q04235 462 aa1.83□□□□□ -2.12
UBR1YGR184C YOL024WQ08172 172 aa1.83□□□□□ -2.12
UBR1YGR184C RRG7Q08774 242 aaPredicted RBP1.83□□□□□ -2.12
UBR1YGR184C YLR046CQ12253 270 aa1.83□□□□□ -2.12
UBR1YGR184C YLR412C-AQ3E742 68 aa1.83□□□□□ -2.12
UBR1YGR184C TY1B-BRQ12193 1756 aa1.83□□□□□ -2.12
UBR1YGR184C TY1B-GR3Q12316 1755 aa1.83□□□□□ -2.12
UBR1YGR184C TY1B-ORQ92393 1755 aa1.83□□□□□ -2.12
UBR1YGR184C KIN28P06242 306 aa1.83□□□□□ -2.12
UBR1YGR184C DBF2P22204 572 aa1.83□□□□□ -2.12
UBR1YGR184C BUB2P26448 306 aaPredicted RBP1.83□□□□□ -2.12
UBR1YGR184C CPR5P35176 225 aa1.83□□□□□ -2.12
UBR1YGR184C UPS2P35200 230 aa1.83□□□□□ -2.12
UBR1YGR184C AST2P39945 430 aaKnown RBP1.83□□□□□ -2.12
UBR1YGR184C PGA1P53896 198 aa1.83□□□□□ -2.12
UBR1YGR184C YHC1Q05900 231 aaKnown RBP1.83□□□□□ -2.12
UBR1YGR184C YCL021W-AQ96VH3 125 aa1.83□□□□□ -2.12
UBR1YGR184C FCY2P17064 533 aa1.83□□□□□ -2.12
UBR1YGR184C FMP23P38231 175 aa1.83□□□□□ -2.12
UBR1YGR184C RPF1P38805 295 aaKnown RBP1.83□□□□□ -2.12
UBR1YGR184C PET8P38921 284 aa1.83□□□□□ -2.12
UBR1YGR184C RMD6P39975 231 aa1.83□□□□□ -2.12
UBR1YGR184C BNS1P50084 137 aa1.83□□□□□ -2.12
UBR1YGR184C NDD1Q08887 554 aa1.83□□□□□ -2.12
UBR1YGR184C YRF1-2P40105 1681 aa1.83□□□□□ -2.12
UBR1YGR184C YOL163WP0CF20 169 aa1.83□□□□□ -2.12
UBR1YGR184C RPL42AP0CX27 106 aaKnown RBP1.83□□□□□ -2.12
UBR1YGR184C RPL42BP0CX28 106 aaKnown RBP1.83□□□□□ -2.12
UBR1YGR184C ATG12P38316 186 aa1.83□□□□□ -2.12
UBR1YGR184C CCC1P47818 322 aa1.83□□□□□ -2.12
UBR1YGR184C YGL204CP53089 101 aa1.83□□□□□ -2.12
UBR1YGR184C ALG13P53178 202 aa1.83□□□□□ -2.12
UBR1YGR184C SDH7Q04401 133 aa1.83□□□□□ -2.12
UBR1YGR184C CDD1Q06549 142 aa1.83□□□□□ -2.12
UBR1YGR184C DFM1Q12743 341 aaKnown RBP1.83□□□□□ -2.12
UBR1YGR184C YBT1P32386 1661 aa1.83□□□□□ -2.12
UBR1YGR184C SPS100P13130 326 aa1.83□□□□□ -2.12
UBR1YGR184C SCL1P21243 252 aaKnown RBP1.83□□□□□ -2.12
UBR1YGR184C SRY1P36007 326 aa1.83□□□□□ -2.12
UBR1YGR184C GPI18P38211 433 aa1.83□□□□□ -2.12
UBR1YGR184C SDT1P53078 280 aa1.83□□□□□ -2.12
UBR1YGR184C ECM11Q04110 302 aa1.83□□□□□ -2.12
UBR1YGR184C YML096WQ04489 525 aa1.83□□□□□ -2.12
UBR1YGR184C IES4Q08561 116 aa1.83□□□□□ -2.12
UBR1YGR184C CDC7P06243 507 aa1.82□□□□□ -2.12
UBR1YGR184C YCR043CP25361 127 aa1.82□□□□□ -2.12
UBR1YGR184C SFC1P33303 322 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms